| Entry |
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| Name |
(RefSeq) eliminates the production of nonsense-containing-like protein
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| KO |
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| Organism |
cthr Thermochaetoides thermophila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cthr00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0062910
03015 mRNA surveillance pathway
CTHT_0062910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cthr03019]
CTHT_0062910
Enzymes [BR:cthr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CTHT_0062910
5.6.2.5 RNA 5'-3' helicase
CTHT_0062910
Messenger RNA biogenesis [BR:cthr03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CTHT_0062910
mRNA cycle factors
Common to processing body (P body) and stress granule
CTHT_0062910
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1098 aa
MEGAFTHLGNHLVSDSAAAIKAGGSDELSNLDPDEHLLYGVHGGRGGGARTGLSSARRRQ
DDDDNDTEVLDDDDDESLASVPVEGMKGLKLKKEEEKELPPHACAYCGIHSPASVVKCLT
CEKWFCSARGNSSSSHIINHLVRARHKEVQLHPQSSLGDTILECYNCGTKNVFLLGFIPA
KSDTVVVLLCRQPCAASTSAKDMSWDVSRWQPLIEDRSFLPWLVQPPTDAEQLRARHLTP
PMIAKLEEMWKESPNATVADLEKNNGVDDEPHPVLLKYEDPYHYQNIFGPLVKMESDYDR
KLKEAQSEDNLQVRWDMGLNNKHLVSFILPKIESGDVKLAVGDEMRLKYKGDLRPYWEGV
GYVIKIPNNQSDEVTLELRKSPNDKSVPTDVTTCFSADYVWKATSYDRMQAAMKTFAVDE
MSVSGYIFHKLLGHEVAVAPMKTQLPKKFHVPGLPELNHSQITAIKTVLSTPLSLIQGPP
GTGKTVTSATIIYHLCKMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES
SVKFLALHEQVRMHTGNPDLRKLAQLKAEVGELSSQDEKKLKQLTRQAEREILANADVVC
CTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQAVLVGDHKQLGPVIMNKK
AAKAGLNQSLFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAERIRKD
VDFPWPVADMPMMFWSNLGSEEISASGTSYLNRTEAANVEKVVTRFFKAGVKPSDIGVIT
PYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGFLS
DPRRLNVALTRAKYGLVIIGNPKVLAKHELWHHLLVHFKDRKCLVEGPLNNLQTSLLQFP
KPKTAYRQPRWQQQQQQQQHVAGGYPNGRYGGMNGSVRDYETGSMVSYIPDDVSSIHSSA
LGGVGLSSAYPHIFSNFHPDQWPGLPGVHAGGRPGTKGRGRGAESVAGESVAPSEYTDAG
ASVIGGKGVGQGGASLGAGLTETVHTARPASYSQSDRLKQYVETGGRMGVGNGYGRRYDD
DEKSVSTAFASQIGSGFD |
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| NT seq |
3297 nt +upstreamnt +downstreamnt
atggagggtgcttttactcacctaggaaaccaccttgtttccgactcggctgcggctatc
aaagccgggggctctgacgagctgtctaacctcgatccggacgagcaccttctttatggc
gtgcatggcggacggggcggtggtgctcgcaccggtctgagtagtgccaggcgccgccag
gacgacgacgacaacgataccgaagtcctggatgacgatgacgacgagagcctggctagt
gtcccggttgagggcatgaagggactcaagcttaagaaggaggaggagaaagaactgccc
cctcatgcttgcgcatactgcggtatccactctcctgccagcgtcgtgaagtgtctcact
tgcgaaaagtggttctgcagtgcccgtggcaattccagctcttcgcatattatcaaccac
ttggtgcgcgcccgccacaaggaagtccagctccacccacagtcgtccctgggtgacacg
attctcgaatgctacaactgcggtaccaagaatgtcttcctcctcggtttcattcctgcc
aagtccgataccgtggttgtgctcctgtgtcgtcaaccttgcgctgcgagcacatcggcc
aaggacatgagctgggatgtttcgagatggcagccccttattgaggaccgatccttcctc
ccctggcttgtccagccccctaccgacgccgagcaacttcgggcacgtcaccttacccct
ccgatgattgcaaagctcgaggaaatgtggaaagagagtcccaatgcgaccgtcgctgat
ttggaaaagaataatggcgtcgatgacgaaccgcatccggtgctgctcaagtacgaggac
ccgtatcactaccaaaatatctttggcccgctcgtcaagatggagtccgactatgacagg
aagctgaaggaggctcagtcggaggacaatctccaggttcgctgggatatgggcctgaac
aacaagcacttggtcagctttatccttccgaagattgagtccggagacgtcaagctcgcc
gttggcgacgagatgcgtctcaagtacaagggcgacctccgtccctactgggagggcgtg
ggctacgttatcaagatccctaacaaccagtccgacgaggtcactctcgaattacgcaag
tcaccgaacgacaagtctgtgccaaccgacgttacgacctgcttctcggccgactatgtc
tggaaggccacctcatatgaccgcatgcaggctgcaatgaagacctttgccgtcgacgaa
atgagcgtttcaggctacattttccacaagcttctcggccacgaagtggcagtcgctcct
atgaagacacagctgcctaagaagttccatgtgcctggccttccggagctgaaccacagt
cagattacagccatcaagacggtgctctcaactccgctgagcctaatccaaggtcctccg
ggcacgggaaagacagttacctcggccaccattatctatcatttgtgcaagatgaacaac
agccaagtgctggtctgcgcaccatccaacgttgccgttgaccagctttgcgagcgtatc
catcgtaccggcctgaaagtcgtccgtctgacggccaagtctcgagaggatgttgagtcg
tcggtgaagttcctggcattgcatgaacaagtgcgtatgcacactggcaacccggatctc
cgcaagcttgcgcagttgaaggccgaagttggcgaactgtcgtcacaggatgagaagaag
ctcaagcagttgacgcgccaagctgaacgggagatccttgccaatgcggacgttgtgtgc
tgtacctgcgtcggcgctggcgacccgcgcctggccaagatgaaattccggaacgtactg
atcgacgaatctacgcagtcggctgagcctgagtgcatgattcctcttgtcttgggttgc
aagcaggcagttttggtcggcgatcacaagcagctcggccccgtcatcatgaacaagaag
gccgccaaggctggcctgaaccagtctctcttcgagcgcttggtaaagctcaacctgacg
ccgatccgcttgaacgtccagtaccgaatgcacccatgcttgtccgaattcccttcgaac
atgttctatgagggttctctccagaacggcgttacccatgcggagcgcatccgtaaggat
gtcgacttcccctggccggtcgccgatatgcccatgatgttttggtcaaatctgggaagt
gaggagatttcggcttcgggtacgtcgtatctgaatcgtactgaagcggcgaatgtcgag
aaggttgtaacccgcttcttcaaggcgggcgtcaagcctagcgacatcggtgtgatcacg
ccgtatgagggccagcgtagctacatcgttagcaccatgcagaatacgggcacctttaag
aaggagtggtataaggaggtcgaggttgcctctgtggatgccttccagggccgtgagaag
gactacatcgtgctttcttgcgtccggtcaaacgacaatcagggcatcggtttcctctcg
gatccccgccgtctcaacgtcgcgctcactcgcgccaagtatggtctggtcatcatcggc
aatcccaaggtgcttgccaagcacgagctctggcatcatcttctcgtgcacttcaaagac
cgtaagtgcctggttgaaggcccgctcaacaacttgcagacatcactgctacagttccct
aaacccaagacggcctatcgccagccccgctggcagcaacagcaacaacagcagcagcac
gttgccggtggttatcccaatggtcgttatggaggcatgaacggttctgtccgtgactac
gaaactggctcaatggtctcgtatatccctgatgacgtctcttccatccacagctctgcc
ctcggcggcgtcggccttagctcggcctacccacacattttctccaacttccatcctgac
cagtggcccggtcttcccggcgtccacgcgggcggccgtcctggcaccaaaggccgtggc
cgcggcgcagagagtgtggctggcgagagtgtcgcccctagcgaatacacagatgccggc
gccagcgttatcggcggtaagggcgtcggccagggcggtgctagcttaggtgccggtctt
actgagacggtacacacagctcgccctgcttcatacagccagagcgatcggctgaagcag
tatgttgagacgggcggtcgtatgggtgttggcaatgggtatggtcggcggtatgatgac
gatgagaaaagtgtcagcaccgcatttgcgagccagatcggctcggggtttgactga |
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