Thermochaetoides thermophila: CTHT_0063040
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Entry
CTHT_0063040 CDS
T03100
Name
(RefSeq) putative RNA export protein
KO
K14298
mRNA export factor
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0063040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0063040
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0063040
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0063040
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CTHT_0063040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_like
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
18260342
NCBI-ProteinID:
XP_006696611
UniProt:
G0SEA3
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAGLFGTTTSTTTSTLGDLKNDVELGSPPEDSITDLSFNPNPNDPKDFLAVSSWDKKVRV
YEIAANGQNQGKVQMEHEGPVFAVDFFKDGTKVISAGADKQAKVLDLASGQAMQVAAHDA
PIRCVKYFEAGGTPMAVTGSWDKTIKYWDFRSATPAGTVQCQERVYTMDVKENLLVIGTA
DRYIDVINLKEPVKFYKTLQSPLKWQTRVVSCFTDSQGFAIGSIEGRCAIQYVEDKDQSM
NFSFKCHRDTPQNNVTNVHAVNAISFHPQHGTFSTAGSDGTFHFWDKDAKHRLKGYPNVG
GSITATKFNRNGTIFAYAISYDWSKGYQGNTANYPTKVMLHPVLGDECKPRPSVKKR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctcttcggcacgacgacgtcgacgacgaccagcacgctgggcgatctcaaa
aacgacgtagagctgggcagcccgccggaggatagcatcactgacctgtccttcaatcct
aatcccaacgaccccaaggacttcctggcggtttccagctgggacaagaaggtgcgcgtg
tatgagatcgctgcgaacggccagaaccagggaaaagtgcaaatggagcatgaggggcct
gtttttgctgtagatttctttaaggacggcaccaaggtcatctcggccggcgccgacaag
caggccaaggtgctcgacctagcgtcgggccaggccatgcaggttgctgcacacgacgcg
ccgatccgctgcgtcaagtacttcgaggcgggaggcacgccgatggctgtgacgggctcg
tgggacaagaccatcaagtattgggacttccgcagcgcgacgcccgccggcaccgtgcag
tgccaggaacgcgtgtacacgatggatgttaaggagaacctgctagtaatcggcacggcg
gaccgctacattgacgtcatcaacctaaaggagcccgtcaagttttacaagaccctgcag
agcccgctcaagtggcagactcgggtggtgagctgctttaccgactctcagggatttgcg
atcggcagtattgagggccgctgcgcgattcaatatgttgaggacaaggatcagagcatg
aacttctccttcaaatgccaccgcgacaccccgcaaaataacgtgaccaacgtgcacgcg
gtcaacgccatctccttccacccgcaacacggcacgtttagcacggccggtagcgacggt
accttccacttctgggacaaggacgcgaagcatcggctcaagggctacccgaatgtgggt
ggcagcattacggcaaccaagttcaaccgcaacggcaccatatttgcgtacgccatcagc
tacgactggtccaagggctaccagggaaacacggccaactatccgactaaggtcatgctg
catcctgtgttgggcgacgagtgcaagccgcgtccgagtgttaagaagaggtaa
DBGET
integrated database retrieval system