KEGG   Thermochaetoides thermophila: CTHT_0063040
Entry
CTHT_0063040      CDS       T03100                                 
Name
(RefSeq) putative RNA export protein
  KO
K14298  mRNA export factor
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTHT_0063040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0063040
   03036 Chromosome and associated proteins [BR:cthr03036]
    CTHT_0063040
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTHT_0063040
Chromosome and associated proteins [BR:cthr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CTHT_0063040
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_like Pep3_Vps18
Other DBs
NCBI-GeneID: 18260342
NCBI-ProteinID: XP_006696611
UniProt: G0SEA3
LinkDB
Position
Unknown
AA seq 357 aa
MAGLFGTTTSTTTSTLGDLKNDVELGSPPEDSITDLSFNPNPNDPKDFLAVSSWDKKVRV
YEIAANGQNQGKVQMEHEGPVFAVDFFKDGTKVISAGADKQAKVLDLASGQAMQVAAHDA
PIRCVKYFEAGGTPMAVTGSWDKTIKYWDFRSATPAGTVQCQERVYTMDVKENLLVIGTA
DRYIDVINLKEPVKFYKTLQSPLKWQTRVVSCFTDSQGFAIGSIEGRCAIQYVEDKDQSM
NFSFKCHRDTPQNNVTNVHAVNAISFHPQHGTFSTAGSDGTFHFWDKDAKHRLKGYPNVG
GSITATKFNRNGTIFAYAISYDWSKGYQGNTANYPTKVMLHPVLGDECKPRPSVKKR
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcgggcctcttcggcacgacgacgtcgacgacgaccagcacgctgggcgatctcaaa
aacgacgtagagctgggcagcccgccggaggatagcatcactgacctgtccttcaatcct
aatcccaacgaccccaaggacttcctggcggtttccagctgggacaagaaggtgcgcgtg
tatgagatcgctgcgaacggccagaaccagggaaaagtgcaaatggagcatgaggggcct
gtttttgctgtagatttctttaaggacggcaccaaggtcatctcggccggcgccgacaag
caggccaaggtgctcgacctagcgtcgggccaggccatgcaggttgctgcacacgacgcg
ccgatccgctgcgtcaagtacttcgaggcgggaggcacgccgatggctgtgacgggctcg
tgggacaagaccatcaagtattgggacttccgcagcgcgacgcccgccggcaccgtgcag
tgccaggaacgcgtgtacacgatggatgttaaggagaacctgctagtaatcggcacggcg
gaccgctacattgacgtcatcaacctaaaggagcccgtcaagttttacaagaccctgcag
agcccgctcaagtggcagactcgggtggtgagctgctttaccgactctcagggatttgcg
atcggcagtattgagggccgctgcgcgattcaatatgttgaggacaaggatcagagcatg
aacttctccttcaaatgccaccgcgacaccccgcaaaataacgtgaccaacgtgcacgcg
gtcaacgccatctccttccacccgcaacacggcacgtttagcacggccggtagcgacggt
accttccacttctgggacaaggacgcgaagcatcggctcaagggctacccgaatgtgggt
ggcagcattacggcaaccaagttcaaccgcaacggcaccatatttgcgtacgccatcagc
tacgactggtccaagggctaccagggaaacacggccaactatccgactaaggtcatgctg
catcctgtgttgggcgacgagtgcaagccgcgtccgagtgttaagaagaggtaa

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