Thermochaetoides thermophila: CTHT_0063410
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Entry
CTHT_0063410 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTHT_0063410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0063410
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
Pre-60S particles
RNases
CTHT_0063410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REXO3_N
REX3_N
Motif
Other DBs
NCBI-GeneID:
18260379
NCBI-ProteinID:
XP_006696648
UniProt:
G0SEE0
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MDAMEAVLRNFKTIPCPSGDACTKPGCQWQHSWDREPQTSSSSSKPAPAASQDEDGPRKR
RKLSSEPVPALAPAPVKDEPKPATPHPKSTLEKPVSPPPVKRFTPPKSSPPLKHKVPQPT
ASAATVIQPTVEKQSVATPSKANGASAVRASPKPSPLPASHGATSNPAVILSNASTVRSS
SQRAVLPRVSVASDPNPKTGKAAPSTTSKTSSPDVSTPQKATLQTQPQSMNRKPEALNPR
HLKTAPAPHDFRYKCLKLLHEQFARLNNELKKDAKDDEKPLILSPQELIWLALDEEERIA
TEKPAIYNNVIKNRIMHYKKMTVPSWMAERRAALQKQQAVVTPSPARFAAPKAINGPPKE
VDTGLTPELEVEFLKFLQTPIDKLAQFGYIPRAPTEEEIKAAIEGEEAANGWEICERCKT
RFQVFPGRREEDGALTSGGACTFHPGKAYYPERVPGDSTSHSKRFNCCNTVPGDTPGCSI
HQTHVFKTSSPARLAALLPFKETPPNPDAPKDRAVCFDCEMGYTVKGMELLRLTATSWPD
GKELLDVLVQPYGEILDLNSRYSGVWPEDIANAVPWEPGQPLPLPTFVGPEAASVPPSEG
VADPKTKQRLRKKLPIVPSPAAARDLLFSLISPDTFLIGHALENDLNAVRIIHPCLIDTA
LLFPHRRGLPMRYRLKGLMEIHLNKTIQIETPVVDGEGKAVPVEGGHDSAEDARAAGELV
RLRVMERWREMKKQGWKIEEGRFVPPAGEGEKKEESEGNEGEVVEDQGVGVGKVVADLAA
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatggaagcagtgctgcgaaacttcaagaccatcccctgcccatcaggggac
gcctgcaccaagcccgggtgccagtggcagcactcctgggaccgtgagccacagacatca
tcctcatcgtcaaaacccgcgcctgcggccagccaggacgaagacgggcctcgaaagcgt
cgcaagctctcttcggagcctgtgcctgcgcttgcgcctgctcctgtgaaggatgagccg
aagcctgccactcctcaccccaagtcgactttggagaagcccgtctctcctcctcctgtg
aagagattcactcctccaaagtcctcgccgcctctcaagcacaaggtgccgcagcccacg
gccagcgccgcgacggtgatccagcctacagtggaaaagcagtcagttgctacgccctct
aaggcaaatggtgcgtcggcagtcagagcttcaccaaaaccttcacccttacctgcatca
catggagcgacttcaaatcctgctgtgatcctcagcaatgccagtaccgtccggtcttca
tcacagcgcgccgtgttaccacgcgtctctgtggcatctgatccgaacccaaaaacaggc
aaagccgctccctccacgacttctaaaacttcctctcccgacgtttctacacctcaaaaa
gcaactttgcaaacacaaccacagagcatgaacagaaagcccgaggccttgaatcctcgg
catctgaagactgcgcccgcacctcacgactttcgatacaagtgtctgaagctcctacat
gagcagttcgcacggcttaacaatgaattgaaaaaggatgctaaagacgacgaaaagcct
ctaattctttcgccgcaggaactgatctggcttgcgcttgacgaagaagagcgcatcgcg
accgagaagccggccatttacaacaacgtcatcaaaaacagaatcatgcattacaaaaag
atgacggttccttcgtggatggccgagcgccgagccgccctccagaagcagcaggccgtg
gtcaccccttcgccggctcggtttgctgctcccaaggctatcaatggtcctcctaaagaa
gtcgataccggcctgacgcctgaattggaggtcgagtttctcaagtttctccagaccccc
atcgataagctcgctcagttcggctacatccccagagcccctactgaggaagagatcaag
gcagccatcgaaggcgaggaagccgccaatggctgggaaatctgtgagcgctgcaagacc
cgcttccaggtcttccccggccggcgcgaggaagatggtgccctcacctccggcggtgct
tgcacattccacccgggcaaagcttactaccccgagcgcgtccccggcgactcaacctca
cattccaagcgcttcaactgctgcaataccgtaccgggcgacaccccaggctgctccatc
caccagacccacgtgttcaagacctcatccccggccaggttggcggctctgctccccttc
aaagagaccccgcccaacccggatgcccccaaagatcgtgcagtttgttttgattgcgaa
atgggctacaccgtcaagggcatggaattgctgcgcctgacggccaccagctggccggat
ggcaaggagctgcttgacgtgctggttcaaccctacggtgaaatcctcgacctcaactcc
cgctactcgggcgtctggcccgaggatatcgctaatgccgtgccttgggagccagggcag
cctttaccgttgcctacttttgtgggccccgaagcggcgtcagtacccccgtctgagggc
gtcgccgatcccaaaacaaagcagcgtcttagaaagaagcttcccatcgtaccctcccct
gcggcagcccgcgatctcctcttctctctgatttcgccagatacattcctcatcggtcat
gccctagaaaatgacctcaacgccgtgcggattattcatccctgcttgatcgacactgct
ctcctcttcccccaccgtcgtgggctaccgatgaggtataggctcaaggggttgatggag
atacatttgaataagactatacaaatcgaaacgccggtggtggatggggaggggaaagcg
gtgcctgtggaggggggccatgattctgcggaggatgcgagggctgcgggggaactggtg
aggttgagggttatggagcggtggagagagatgaagaaacaggggtggaagattgaggag
gggaggtttgttcctccggcaggggaaggagagaagaaagaggagagtgaagggaatgag
ggggaagttgtggaagatcaaggagtgggcgtggggaaggtggtggcggatttggctgct
gtttag
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