Thermochaetoides thermophila: CTHT_0065070
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Entry
CTHT_0065070 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0065070
03041 Spliceosome [BR:
cthr03041
]
CTHT_0065070
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0065070
Enzymes [BR:
cthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTHT_0065070
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CTHT_0065070
mRNA cycle factors
Common to processing body (P body) and stress granule
CTHT_0065070
Spliceosome [BR:
cthr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CTHT_0065070
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CTHT_0065070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18260545
NCBI-ProteinID:
XP_006696810
UniProt:
G0SG53
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAEQLSNGMNKLSLDSQAPAAPAQQPAVRSYIPPHLRAKMAQQQQQQQAGANGSATTPSV
GGGPSSTMSGLNNSAWANNNNYDSGRNWGNYDSWNSRGGGFNRNAYRGPGGGGMGGGFGR
GEGRWVDGKHLIGNPDPRLERELFGSADDPSKQHTGINFEKYDDIPVTPSGRDVPEPVLT
FSNPPLDPHLLSNIELARYKIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPILHL
SFTQGPSPVPAQPGGYGRQRKAYPTALILAPTRELVSQIYDEARKFAYRSWVRPCVVYGG
ADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRR
IVQGEDMPPTGKRQTLMFSATFPRDIQMLAQDFLHDYIFLSVGRVGSTSENITQKIEYVE
DIDKRSVLLDILHTHTGGLTLIFVETKRMADSLCDFLINQNFPATSIHGDRTQRERERAL
ELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF
FNRGNRGIVRELIDLLKEANQEIPSFLETIARESSYGGGRGGRGGGGGRGRGRGGQTDFR
KYGGGGGGFGGPSHSSGGYGGGYGGGYGGPPSGGYGGYGGGYGGGYGNPGGSGGQSWW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaactcagcaacggcatgaacaagctttcccttgactcgcaggcccccgct
gctcctgctcagcagccggccgtgcggtcgtacatccctccccacttgcgggctaagatg
gcccaacagcaacagcaacaacaggccggtgccaacggctctgctacgacccccagtgtc
ggcggcggcccgtctagcaccatgagcggcttgaacaacagcgcctgggctaacaacaac
aattacgattccggtcgtaactggggcaactatgactcgtggaacagccgtggtggcggc
ttcaaccgcaacgcctaccgtggcccgggtggcggcggcatgggcggtggcttcggccgc
ggtgagggccgctgggttgacggcaagcacctcattggtaaccccgatcctcgcctggag
cgggagcttttcggcagcgccgacgatccgagcaagcagcatactggcatcaactttgag
aagtatgatgacattcccgtcactccctccggccgcgatgtcccggagcccgtccttacc
ttcagcaatccgcctctggacccgcatctgctgtccaatatcgagctggctcgctataag
atccccaccccggtccagaaatactctattcccattgtcattaacggccgcgacctgatg
gcctgcgcccagaccggttccggcaagactggcggtttcctcttccccatcctgcacttg
tccttcacccagggcccatcgcctgtccctgcccagcccggtggctatggtcgtcagcgc
aaggcctaccccacggccctgatcctcgcccccactcgtgagctggtctctcagatctac
gatgaggctcgcaaattcgcctaccgctcgtgggtccgtccctgcgtcgtctacggtggt
gcagatatcggctcgcagctccgtcagatcgagcgcggttgcgatctcctggtcgccacg
cccggccgtctggtcgacctgattgagcgtggccgcatctcgctctgcaacatcaagtat
ctggttctcgacgaggccgaccgcatgcttgatatgggtttcgagccccagattcggcgc
atcgtccagggtgaggacatgcctcccaccggcaagcgtcagaccctaatgttctcggcc
accttcccccgtgacatccagatgctcgctcaggacttcctgcacgactacatcttcctc
tcggtcggtcgtgtcggttccacttctgagaacatcacccagaagattgagtatgtcgag
gatattgacaagcgctctgtcctgctcgacattttgcacacccacactggtggcctgacc
ctcatctttgtcgagaccaagcgcatggccgactcgctctgcgacttcctgattaaccag
aacttcccggctacctcaattcacggtgaccgtacccagcgcgagcgtgagcgtgccctc
gaactcttccgcaacggcaagtgccccatactggtggctactgctgtcgctgctcgtggt
ctcgatattcccaacgtcacccacgtcatcaactacgatctgcccaccgatatcgatgac
tacgtccatcgtatcggtcgtactggccgtgccggcaacacgggtattgccacggccttc
ttcaaccgcggcaaccgtggcatcgttcgtgagttgattgacctgctcaaggaggccaac
caggagatcccgagcttccttgagactattgctcgcgagtcttcgtacggcggtggccgt
ggtggccgtggcggcggtggtggtcgtggccgtggtcgtggtggccagaccgacttccgc
aagtacggcggtggcggtggcggcttcggtggtccttcccacagctctggtggctacggt
ggtggctatggcggcggttatggcggccccccgagtggtggttatggcggttatggcggc
ggctacggcggtggctacggcaaccccggtggttctggcggccagtcttggtggtaa
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