Thermochaetoides thermophila: CTHT_0067280
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Entry
CTHT_0067280 CDS
T03100
Name
(RefSeq) DNA (apurinic or apyrimidinic site) lyase-like protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTHT_0067280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0067280
Enzymes [BR:
cthr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CTHT_0067280
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CTHT_0067280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
18260766
NCBI-ProteinID:
XP_006697021
UniProt:
G0SGR4
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MVRRSARNAAKEPATTTTTTTTTDPHEEAIKTETNGAEADSEELKQRNKRKASASEPKPQ
SVDSPEADSPEEEESKPEPKKRKTTSSTKLSSQQEQTEMPLAPRTAVNTLRRAMYIGAHV
SAAGGVHNSIPNAIHIGANAFALFLKSQRKWTSPPLADDAKNQFHALIKQHGYDATKHVV
PHASYLINLAQADAAKAKQAYDCFLDDLKRCEALGIGLYNFHPGSAGPGGDMKAACGRIA
AQLNKAIKATKSVVVLLENMCGSGNVVGGRFEELADIISQVEDKSRIGVCLDTCHAFTAG
YDLRTPEAFAQTLAEFDRTIGLKYLKALHLNDSKAPYHSNRDLHANIGTGFLGLRAFHNI
MNCPTLENLPMVLETPIEEKDAKGKTVENKQIWADEIKLLESLIGMDVESEEFNRLECEL
QKKGAAERRRIEEQVEKKATKEKKKLDGGKKERGAMDAFVVKKKGEGEA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccgctcggcccgcaacgccgccaaagagcccgccaccaccaccaccaccacc
accaccaccgaccctcacgaagaggccatcaagaccgagaccaacggcgccgaagccgat
tccgaggagctgaagcagcgcaataagcgcaaagcttccgcctcagagccaaaaccccag
tcagtcgacagccccgaagccgactctcctgaggaagaagagtccaaacccgagcccaag
aagcgcaagaccacctcctccaccaaactctcctcccaacaagaacaaaccgaaatgccc
ctcgccccgcgcaccgcagtcaacaccctccgccgtgcgatgtacatcggcgcgcacgtc
tccgcagccggtggggttcacaactccatccccaacgccatccacatcggcgcgaacgcc
tttgcgctcttcctcaagtcccagcgcaaatggaccagccctcccttagccgacgacgcg
aagaaccaattccatgccctgatcaagcagcacgggtacgatgcgacgaagcacgtcgtt
ccgcacgcgagctatctgatcaaccttgcgcaagcggacgccgcgaaggcaaagcaggcg
tatgactgcttcctggatgatctgaagcggtgcgaggcgctgggaatagggctgtataac
ttccatccggggtcggcgggtcctgggggggatatgaaggctgcgtgtgggaggatcgct
gcgcaacttaataaggcgatcaaggcgacgaagagtgttgtggtgttgttggagaatatg
tgtggcagtgggaatgtagtcggggggaggtttgaggaactggcggatatcatctcgcag
gtggaagataagtctcgaattggggtttgtctggatacttgccatgctttcacggctggg
tatgatttgcgcacaccggaggcgtttgcccagacgctggccgaattcgaccgcaccatt
ggcctcaaatacctgaaggccttgcacctaaacgatagcaaagccccctaccactcgaac
cgcgacctccacgcgaatatcggcacaggcttccttggcctgcgtgccttccacaacata
atgaactgccccaccctcgaaaatctccccatggttctagagacgcctatcgaagagaag
gacgcgaagggcaagacagtggaaaacaagcaaatctgggcggacgagatcaagcttctg
gagagcttgatcggcatggacgtggagagcgaggagttcaacaggctggagtgcgagctg
cagaagaagggggctgcggagcgcaggcggatcgaggagcaggtggagaagaaggcgacg
aaggagaagaagaagttagatggggggaagaaggagaggggcgcgatggatgcttttgtg
gtgaagaagaaaggggagggagaagcttga
DBGET
integrated database retrieval system
