Thermochaetoides thermophila: CTHT_0068240
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Entry
CTHT_0068240 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0068240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0068240
Spliceosome [BR:
cthr03041
]
Complex A
Other components
Complex A specific factors
CTHT_0068240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_4
zf-CCHC_6
zf-CCHC_3
zf-CCHC_2
CCDC93_CC
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
18260862
NCBI-ProteinID:
XP_006697113
UniProt:
G0SH06
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAWRNQGITGSNNIPLGKRRFGGDADKDKEDDATNGNITTSNGIENGDLKRGRSPERSEE
PRRRKKRNRWGQASDNKAAGLMGLPTAIVADMTAEQLEAYTLYLRIEEITQKLKIDDVVP
ADGDRSPSPPPQYDNHGRRINTREYRYRKRLEDERHKLVEKALKTIPNYHPPSDYRRPTK
TQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEGKGRSDAAHS
SNQEEDLHCLIMADTEEKVQKAKKLIHNIIETAASIPEGQNELKRSQLRELAALNGTLRD
DENQACQNCGQIGHRKYDCPERQNYTANIICRVCGNAGHMARDCPDRQKGASWRNDGPRG
GSRFGGGDAVDREYEQLMQELGGGPAPARIEAGPSSGSGGGSERPWARGPTGGPAPWRVR
NNNPSHDTDGAPSGPSGGTAPWVRDRERDRDRGFRGSDGPAAGDSYFPGQPSYGSASAPP
GTAPWHQAPPMNAQPPPPPFGYPSYGAYGAPGAPPGLPIPPPGLPPPPPPPGASAPGAAP
PGLPGGLNTLIQQYAGAVPPPPPPPPPPPAGDAPPPPPPMDLPPPPPPSGA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagaaatcaaggcatcaccggttctaacaacattcccttggggaagcgccgc
tttggtggcgatgccgataaggacaaggaagatgacgcaactaatggtaacatcacgact
tcgaacggcatcgagaatggcgatctcaagcgcggccgcagtccggagcgttccgaagaa
ccgcgtcgtcgaaagaagcgtaatcgttggggccaggctagtgacaacaaggctgctggt
ttaatgggcttgcctaccgcaatcgttgccgacatgaccgcagagcagctggaagcctac
acattgtatctgcgcattgaggagattacccagaagctaaagatcgacgatgttgttccc
gctgatggagacaggtctccatctccgcccccccagtacgacaaccatggccgtcgcatc
aatactcgcgagtatcgttatcgcaagcgcctcgaagatgagcgtcacaagctggtcgag
aaggccctcaagacgatccccaactaccatccaccttccgattatcgccggccaaccaag
acccaagagaaggtttacgtgccagtcaacgactacccagagatcaacttcattggttta
ctcatcggtcctcgtggcaatacactcaaaaagatggaggcagagtctggtgccaagatt
gctatccgtggcaaaggttccgttaaagagggcaaagggcggtctgatgctgcccattcc
agcaatcaggaggaagatctgcactgcttgatcatggcagacactgaggagaaggtccag
aaggccaagaagctgattcacaatattattgagacagctgcctctatccccgagggtcaa
aatgagcttaagcgaagtcagctccgtgaattggctgctctgaacggcacactgcgtgac
gatgagaaccaggcctgtcagaattgcggtcagatcggtcatcgcaagtacgactgcccc
gaaaggcaaaattacacggccaatatcatttgccgtgtctgtggtaacgccggccatatg
gctcgtgattgcccagacaggcagaagggtgccagctggcgcaatgatggtcctcggggc
ggcagtcggtttggaggtggcgatgctgtggatcgcgaatatgagcaactcatgcaagaa
cttggtggtggccctgctcctgcgcgcattgaagctggtcccagctctggctctggaggt
gggagcgagcgcccgtgggctcgtggtcccacaggtggtcctgccccgtggcgcgttcgt
aacaacaaccccagccacgatacggatggtgctccttcgggcccttcaggcgggactgct
ccatgggtgcgtgaccgcgagagagatcgtgatcgcggattccgcgggtcagacggccct
gccgcaggcgacagttactttccaggccagccctcgtacggaagtgcttctgcacctcct
ggaactgcaccttggcatcaggcacctcccatgaatgctcagcctcctccgccgccgttt
ggttatcctagctatggagcttatggtgcccccggtgctcctccaggtcttcctattccg
ccgcctggccttcctcctccccctcctccccctggagcgtcagctcctggtgctgctcct
cccggtcttcctggtggtctcaacacacttatccagcaatatgctggcgctgtgccccca
ccgcccccgccgcccccgccacctcccgctggagatgctcctcctcctcctccgcccatg
gacttgccgcctcctcctcccccttccggtgcttaa
DBGET
integrated database retrieval system