Thermochaetoides thermophila: CTHT_0069460 Help Entry CTHT_0069460      CDS       T03100                                  Name (RefSeq) putative polyadenylation protein   KO K15542   polyadenylation factor subunit 2 Organism cthr  Thermochaetoides thermophila Pathway cthr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cthr00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CTHT_0069460  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cthr03019]     CTHT_0069460 Messenger RNA biogenesis [BR:cthr03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      CTHT_0069460 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR75_1st WDR54 WD40_MABP1-WDR62_1st Beta-prop_WDR11_2nd Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_RIG_1st Nucleoporin_N Spt20_SEP TFIIA Motif Other DBs NCBI-GeneID:  18260984 NCBI-ProteinID:  XP_006697225 UniProt:  G0SHB8 LinkDB All DBs Position Unknown AA seq 668 aa AA seqDB search MAFDGRDGFTGAHDAPEPRPRVRGRRPVTDYGATIVHWMRHRQPRYKGSYAGEIERPSHS YIVDMLPPHARITSPADSVPTRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWN GTGFNFETIMQAHDSAIRALAYSHSDDWLVSADHDGIIKYWQPNFNNVESIRGHQDPIRD LAFSPNDTKFVTASDDSTLRIFDFAAGAAESTLTGHGWDAKSCDWHPTKGLIVSGSKDHL VKLWDPRTGRCLTTLHGHKNTITKTLFERVRGQCLATSARDQTARVFDLRMMRDIVLLRG HDKDISTLAWHPIHSNLLSTGGSDGALFHYLLDEPNTPPGHSTSIAPYDSPDPLSTPAQT IYPAHRIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWARARPGEADNFNSRYHIGEAA AEAQGTWDRRGHRHMRQAEEEQELEDEMDGLVDQKMPLKHQREQMQQQAAQAQAAASQPP ALPGLPGIPGLPQPSTSSAGALPGLIPPPPPIIPGVGAGAVPPLPFPLPPPGTIPPPLPG LLPSADGKGTPDFAAIAEMMKKAGIMPPLPPGGQLPPGFVPPPPPGAGAGFAGLPGLGFP PVPGFMSEQQQQQQQQQQQQQQQQQQGQKREEGGSGSGSGGIRKRAPLPSQEESLRMEQS RGNYTRPR NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atggcctttgatggccgcgacggcttcacgggggcccacgatgcccccgagccgcggcca agggtacggggcagacggcccgtcaccgactatggcgcaaccatcgtccactggatgcgt catcgccagcccagatataaggggtcctatgctggcgagatagaacgcccaagccacagc tatattgttgatatgctccctccccatgccaggataacaagcccagcagactcggtgcca acaaggcacctgcactcctccctcaacaagatcaagcaccccattaacgtggtgcgctgg acgcccgaaggccgccgtctgctgacagcttctagcagcggcgagttcacgctctggaac ggcacgggcttcaacttcgagaccattatgcaggcccacgactcggctatccgcgctcta gcttactcgcatagcgacgactggctggtgtcggctgaccacgacggcattatcaagtac tggcagcccaacttcaacaacgtcgaaagcatccgcggccaccaggaccccatccgcgac ctggccttcagccccaacgacaccaaattcgtcactgcctccgacgactcgaccctccga atcttcgacttcgccgccggcgcagccgagtcaacccttactggccacggctgggacgcc aaaagctgcgactggcacccgacaaagggcctgatcgtctccggttccaaggatcacttg gtgaagttgtgggaccctcgcacaggccgctgcctcaccaccctgcacggccacaagaac accatcaccaagaccctcttcgagcgcgtccggggccaatgcctagcgacctcagcccgc gatcaaaccgcccgtgtattcgacctccgcatgatgcgcgacatcgtcctgctgcgcggc cacgacaaggatatctcgaccctcgcttggcatcccatccacagcaacctgctcagcaca ggcggctccgacggcgccctcttccactacctcctcgacgagccgaacactccgcctggc cactcaacttccatcgccccctacgacagccccgacccgctttcgactcctgcgcagacg atttaccccgcccatcgcatcccctacgcgcacgacttcgccatctggtctttggattgg cacccgctgggtcatattttagcctccgggtcgaacgaccgcatcacgcggttttgggca cgcgcgaggcccggtgaggcagacaatttcaattcgcggtaccacatcggcgaggcggcg gccgaggcgcaagggacgtgggatcgtcgcgggcatagacacatgcgtcaggctgaggaa gaacaagaattggaggatgagatggatgggttggtcgaccaaaagatgccgcttaagcat cagcgggagcagatgcagcaacaagcggcccaagcccaggccgctgcctcccaaccgcca gctctaccgggtctccctggaatccctgggctgccgcaaccatcgacttcctctgctggt gcgctgccaggtcttattccccctccgccccccatcatacccggcgttggtgcgggcgca gtcccgcccctgccgttcccccttccccctccaggcacgatacctcctcctttgccaggc ttgttaccctccgcggatggaaaggggacgccagactttgcagccatagcagagatgatg aaaaaagctggcatcatgccccctctcccgccagggggacaattaccccctggttttgtg ccgcctccaccaccgggagctggggcagggtttgcggggctgccggggttggggttcccc ccagtaccagggtttatgagtgaacagcagcagcagcagcagcagcagcaacaacaacaa caacaacaacaacaacagggccagaaaagagaggagggagggagtgggagtgggagtggg gggataagaaagagggcaccgctgccgagtcaggaggagagcttgaggatggagcagagt agggggaattatactaggccgaggtga

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