Thermochaetoides thermophila: CTHT_0069670
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Entry
CTHT_0069670 CDS
T03100
Name
(RefSeq) WD40 repeat-containing protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0069670
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0069670
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CTHT_0069670
RSC complex
CTHT_0069670
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CTHT_0069670
SWI/SNF complex
CTHT_0069670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Bromodomain
WD40
SnAC
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ResIII
QLQ
WD40_CDC20-Fz
DEAD
WDR55
Beta-prop_EML
HDA2-3
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
RBR
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
18261005
NCBI-ProteinID:
XP_006697245
UniProt:
G0SHD8
LinkDB
All DBs
Position
Unknown
AA seq
2313 aa
AA seq
DB search
MGRSDSDSEDYEVEQPSLPDDDPMRAYIPATFGKTTREANIEAQIERTRRKVEPKKPEQK
KPLMVTSKMDSEDESESDSDSDSDDSESEDEAEKFPVTHEIVLKTHERAITTIALDPAGS
RMLTGSLDGTIRFHDFTSMTPTTLRAFKSIDPWETKKSVNNDSHPIQHLEFSRHSGGLFM
CVTAHPQLKIMDRDGAVVTEFVKGDMYLRDMHNTKGHVGEINNGTWHPLDQNICITAGSD
STVRIWDINNKRCQKEIIVFKSKAAGAAGRTRMTAVAWGSPPEGNSSLIVAAALDGSLVM
YPGNGPFTRPAGEVKDAHQPDTWTGGIDISPDGRMVVTRGGDGLIKLWDTRKFKAPLIKV
EHASTSDRYPMTNIKYAPDARYIITGSVNGELHILNPANLRPEHVTPITPGVPLITVEWH
PKINQIITGSANAETHVLYNPKLSHRGALEVMSRAPKKRHIDDDPAFTMDQSSLGFSGDA
IVAPGALGRRGGVSASGKSRDPRRPQVQQITPFMRSQPDEKHIEQNIPLSKMLHEDPREA
LLKYAEVAKKEPLFTNAWAKTQPVTQYAELSDDEEEGPEKKKVKRRAAAAMMGQPTNCIL
RLAGTAEPLPSACMNAASGVSPHQQEGADRPRDRVSARIKKITNLPPRRINAISKQPASD
GAINSQPHPPATTLETPLCLHDFLYFDHAKTRTLLFFSPPGLCSPFFAPRRAQAGHLQPL
SLPPPPPLLRLFHRRDNHTPADPVARAHHHNVFAGRRSDRPYRAIAINRTDAVVDSAVAM
TSVQVPQVPPAVQLPGTAIPANMTQQQAQEVYKRWRQMKESGVPPTDPEFIKTQNILSAL
QRQSDMRKQMQMQQQMQLQQQQQQQQQQQQQQQQQQQQQQQVMQNGANGVINGTQFGRVA
QPGAAPASMPPATGALGASALPAGSAAPAQNAAGASALPPQLQGHPHFTQAQLNLLMNQI
KAFRMLGKNAGVPIQMQKAIFEHRARRRQSLGKQEPQPAATSVTPTTSAETPAPDASKPA
VNGPEAIKAAAPATTTASLSDPQSKTFKTVKSPFDAGFVRKTISYIDHSRRKNRQLVPGL
FPTGIDFEQLRADREKIIFNRMSQRYQELKSLPGNLAHWDASKDELVADDTAKRKAIIEM
KKLALYSKQRALREKIGRQMMHYDNLAMTTNRAQYRRMKKHNVREARITEKLEKQQRDAR
ENRERKKHIDFLQAIQNHRNEVLNAGAAQRLKMSKLSRHMYNHHFNIEKEEQKRIERTAK
QRLQALKANDEEAYLKLLDQAKDTRITHLLKQTDGFLKQLAASVREQQRQAAEKYGEPMD
IPSSEDEDEDDENGRSKIDYYAVAHRIKEEVTEQASILVGGTLKEYQLKGLQWMLSLYNN
NLNGILADEMGLGKTIQTISLITYLIEKKKQNGPYLVIVPLSTLTNWNLEFEKWAPSVTK
VVYKGPPNARKMQQEKIRQGKFQVLLTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNTNS
KLSATIQQYYTTRFRLILTGTPLQNNLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTG
GQDKMELTEEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEKVIKCKFSALQARLYK
QMVTHQKIIVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPQNISNDLLWRT
AGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRGLHYLRLDGTTKSEDRSEL
LKLFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNE
VRILRLITSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADLAE
SGEQEEMDDEELNMVLARNEEELAIFQKIDEERNRDPIYGTAPGCKGVPRLMTEDELPEI
YLHEGNPAEEENEVHLGRGARERKQIRYDDGLTEEQWLMAVDDDEDTPEAAAARKQARRE
KREQNKLKRLAMLNASMENSPSASRASTEDVETPKKRGRKPGSKNQEKRKAEDGDDEPPA
KKRRGPQGRPKAVGTSSGGSALAPELRDKLQKACRRIFDGLMNLAVDDDEPPEKPEGEND
DESEDEGPPKRLIIGPFVKLPPKREWQDYYVIIQNPICMNDIQKKIKREEYNSLGDMRKD
LDLLVTNCRTFNEETSGICQDANTIEAYFKEHFAKELAEDPDLRALEDPNSPNLVGLNVD
GVNSSASSSSAEASGPATTGESSAAQSSQPASSTTSTTPAPAPAPAAPTGPPRIKLVSSA
NKENKGDTNASANGSAAQTNGGVNGVANGNSEA
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaagcgacagcgacagcgaagactacgaagttgagcagccctcgctgcccgac
gatgaccccatgcgggcgtacattcccgccacgtttggcaagacaacgcgagaggcgaac
atcgaagcccagatcgagcggacgcgacggaaagtcgagcccaaaaagcctgagcaaaaa
aagccattgatggtcacctccaagatggatagcgaagacgagagtgagagcgacagcgac
agcgactctgacgattctgagtctgaagacgaagccgaaaagttccccgtcacccacgaa
attgtcctgaagacacatgagcgggcgattaccaccatcgcgcttgatccagccggttcg
cgcatgcttacgggctcgctggatggcactatcaggttccatgactttacctccatgacg
ccgacgacgttgagggcattcaagagcatcgacccatgggagacgaagaagtccgttaac
aacgattcgcacccgatccagcacctcgagttcagccgacactcgggcggccttttcatg
tgcgtaactgcgcacccacagctgaagatcatggaccgagatggcgccgttgtgacggag
ttcgtcaagggcgacatgtatttgcgcgacatgcacaacactaagggccatgtgggcgag
atcaacaacggtacatggcatcccttagatcaaaatatttgcatcacggctgggtcagat
agcacagtacggatatgggatatcaacaacaagcggtgtcaaaaggaaatcatcgtcttc
aagtccaaggctgctggcgcggcggggaggacaagaatgacagcagtcgcttggggctcc
cctcccgaggggaacagctcactcatcgtcgcggccgctcttgacgggtcactggtgatg
taccccggcaatgggccgttcacaagaccagccggcgaggttaaggacgcacaccagccc
gatacctggaccggtggtatcgatatcagccctgacggccggatggtcgtcacccgcggc
ggcgacggcctaatcaagctctgggacacgcgcaagttcaaggcgcccctaattaaagtt
gagcacgcctcaacttcagaccgctatcccatgaccaacatcaaatatgcccccgacgcc
cgctacatcatcaccggctccgtcaacggcgagctgcacatcctgaacccagcaaacctc
cgccccgaacatgttacccccatcaccccaggagtccccctcatcactgtcgaatggcac
cccaagatcaaccagatcatcactggctccgccaacgccgaaacccacgtcctctataac
cccaaactctcccatcgcggcgcgctcgaagtgatgtcccgcgcgcccaagaagcgtcac
atcgacgatgacccggccttcacaatggaccagagcagtttgggcttctcaggcgacgcg
atcgttgctccgggcgcactgggtcgtcgcggcggcgtgtcggcatcaggcaagtcgcgc
gatccaaggaggccgcaggttcagcagatcacgccgtttatgaggagccagccggatgag
aagcatatcgagcagaatattccgctaagcaagatgctgcatgaggatccacgcgaggcg
ctgttgaagtatgcggaggtggcgaagaaggagccgttgtttacgaatgcatgggcaaag
acgcagccggtgacacaatatgccgagttgagtgatgatgaggaggaggggccggagaag
aagaaggttaagagacgcgctgctgctgcgatgatggggcagcccacgaactgcatcttg
cgattggccggcacagctgagccgctgcctagtgcttgcatgaacgctgcttccggggtt
tcgccgcaccagcaggagggcgcagacaggccccgcgacagggtgagcgcgcgcatcaaa
aaaatcaccaatctccctccgcgacgcatcaacgccatctccaaacagccggcctcggac
ggagccatcaattcccagccgcatcctccggccacaaccctcgaaaccccgctgtgcctg
cacgactttctctattttgaccacgccaaaactcgcactcttctgtttttctccccacca
ggcctgtgttcgcccttcttcgccccccggcgcgcccaggctggacacctacaacctctt
tctctcccccctccccccccattgctgcgtctgttccaccgacgcgacaaccacaccccg
gccgacccggtagcccgcgcgcaccaccacaacgttttcgccggacgtcgcagtgaccgt
ccataccgagcaattgccattaatcgtacggacgccgtagtcgactctgccgtcgccatg
actagcgtccaggtgccgcaggtgccgcctgcggtccagctcccaggcactgccattccg
gcaaacatgacccagcagcaagcgcaagaagtctacaagcgctggcggcaaatgaaggag
tcgggcgtccctcccaccgatccagagttcattaagacgcaaaacattttatcggccctc
cagcggcaaagcgatatgcgcaagcagatgcagatgcaacaacagatgcaattacaacag
caacaacaacagcaacaacaacaacaacagcagcaacagcagcagcagcagcagcagcag
caagtaatgcaaaatggcgctaacggtgtcattaacggcacgcagtttggtcgcgtcgcg
caaccaggtgctgcaccggcctccatgccgcctgctacaggcgcactcggcgcgtctgcg
ttgcctgctggttctgctgctcctgcccagaacgcggcgggtgcctctgcgctgccccct
cagctgcagggccaccctcacttcacgcaggctcagctgaatctgctcatgaaccaaatt
aaggctttcaggatgctgggcaagaatgctggcgtccccattcagatgcaaaaggccatc
ttcgagcaccgtgctcgtcggcgccagtccctcggcaagcaggagccgcaacctgctgct
acttctgttacacctacgacatcggccgaaacaccagctccagacgcctcgaagcccgct
gttaacggccccgaggctatcaaggccgctgctcctgcgaccacaaccgcgagtttgagc
gacccgcaatccaagacattcaagacggtcaagtcgccgtttgacgccggtttcgttcgc
aagactatctcctacatcgaccatagccgccgcaagaatcgccagcttgtccctggcctc
ttccctaccggtatcgactttgagcaactgagggctgatcgggagaaaatcatctttaac
cgcatgagccagagatatcaggagctcaagtcgctgcccggcaatcttgcccactgggat
gcctcaaaggacgagctagttgccgatgacacggcgaagcgaaaggccatcatcgagatg
aagaagctcgccctctactccaagcagcgtgctctgcgcgagaagatcggtcggcagatg
atgcactacgacaacctggctatgaccacgaaccgtgctcaataccgccgcatgaagaag
cacaacgtcagggaagcccgcatcaccgagaaacttgagaagcagcagcgcgatgcccgc
gagaatcgggagcgcaagaagcacatcgatttcttgcaggccatccagaaccatcgcaat
gaggtactcaatgccggcgcggctcagcgtctcaaaatgtccaagcttagccgccacatg
tacaaccatcacttcaacattgagaaggaggagcagaagaggatcgagaggacggccaaa
cagcgtctgcaggcgcttaaggccaacgatgaagaggcctacctcaagcttctcgaccag
gccaaagatacccgcatcacccacttgctcaagcagaccgatggcttccttaagcagctc
gctgcctccgttcgtgaacagcaacggcaggccgctgaaaagtacggagagccgatggac
atcccgtccagcgaagacgaggacgaagatgacgagaatggccgcagcaagatcgactac
tatgcggttgctcaccgcatcaaggaggaggtcaccgaacaggccagcattctggttggc
ggtactcttaaggagtaccagctcaagggtcttcagtggatgctttcgctctacaataac
aacctcaatggcattctggccgacgaaatgggtctcggcaagactatccagaccattagc
ttaattacctacttgatcgagaagaagaagcagaacggcccctacctggtcatcgtgcct
ctctctacgcttaccaactggaacctggagttcgaaaagtgggcgccgtcggtcaccaag
gtcgtctacaagggcccgccgaacgccagaaagatgcagcaggagaagatccggcagggc
aagttccaggtcttgctaactacctacgaatacatcatcaaggacaggccgctgctgagc
aagatcaagtggttccatatgattatcgacgaaggccatcgtatgaagaacaccaactcc
aagctcagcgccaccatccagcaatattacacgacccgcttccgtctcattctcactggt
acccccttgcagaacaaccttgctgagctgtgggccatgctcaacttcgtcctgcccaac
atcttcaagtcggccaagaccttcgacgagtggttcaacacgccgtttgccaacacgggc
ggtcaggataagatggagcttacggaagaagagcaaattctcgttatccgccgcctgcat
aaggtgctgcggccgttcttgctgcgccgtctcaagaaggatgttgagaaggatctcccc
gacaagaccgagaaggtcatcaagtgcaagttctcggctctgcaggctcgtctgtacaag
cagatggttacgcaccagaagatcattgtcagcgacggcaagggcggcaaaaccggcgct
cgtggtctgagcaacatgatcatgcagctccgcaagctgtgcaaccatccgttcgtcttc
gacgaggtcgagaaccagatgaaccctcagaacatcagcaacgacctgctctggcgtacg
gctggcaagttcgagctgctcgaccgcattctgcccaagtacaaggctactggccaccgc
gtcctgatgttcttccagatgactgctattatggacatcatggaggattatctgcgctac
cgtggtttgcactacctccgtctcgacggtaccaccaagtccgaggaccgttccgagctg
ctcaagctcttcaacgcacccgactcgccctatttcatgttcttgctttctacccgtgct
ggtggtctgggtctcaacctgcagactgccgataccgtcatcatctacgactctgactgg
aacccgcaccaggatttgcaggctcaggatcgtgcccaccgtatcggtcagaagaacgaa
gtgcgcattctccgtcttatcacgtccaactcggtcgaagagaagatcctcgagcgtgct
cgtttcaagctggacatggacggcaaggtcatccaggccggtcgcttcgacaacaagtcg
tctgaaaccgaccgtgatgctatgctcagaacgctgctggagacggccgacttggctgaa
tctggcgagcaagaagagatggatgacgaagagctcaacatggtcctggcccgcaacgag
gaggagctcgccatcttccagaagatcgacgaggagcgcaaccgcgatcctatctacggc
actgcccccggctgcaagggcgtgccgcgtctcatgaccgaagatgagctgccggagatc
tacctgcacgagggcaacccggccgaagaagagaacgaggtccacctgggtcgcggtgcc
cgcgagcgcaagcagatccggtacgacgacggtctcaccgaagagcagtggctcatggcg
gttgacgacgacgaggacacgcccgaggctgctgccgctcgtaagcaggcccgtcgtgag
aagcgagagcagaataagctcaaacgcctcgccatgctcaacgcctccatggaaaactcg
ccgtccgctagccgcgcgagcaccgaggatgtggagacgcccaagaagcgggggcgcaag
cctggtagcaagaaccaggagaagcgtaaggctgaggatggggatgatgagccgccggcc
aagaagcgtcgtggaccacagggacggcccaaggcggttggtactagtagtggtggtagc
gcgcttgcgcctgagttgcgcgataagctgcagaaggcgtgcaggagaatctttgatggg
ttgatgaaccttgcggtggatgatgacgagccgccggagaaaccggagggagagaacgat
gatgagagtgaagatgagggcccgccgaagaggctgatcattggtccgttcgtcaagctg
ccgcccaagcgcgagtggcaggattattatgtcatcatccagaacccgatctgcatgaac
gatatccagaagaagattaagcgggaggagtacaacagcctgggcgacatgcgtaaggat
ctggatcttcttgtgacgaattgtcgcacgttcaacgaggagacgagtggcatttgccag
gatgcgaatacgatagaggcgtatttcaaagagcactttgccaaggagctcgccgaggac
ccagaccttcgcgctctcgaggatcccaactcgcccaacttggttggtcttaacgtcgac
ggtgtcaattcctctgcatcttcctcttcggcagaagcttctggccccgctacaacaggc
gagtcgtcagccgcgcagtctagccagccagcgtcgtccacgacttcgactacccctgcc
cccgctcctgcaccggcggcgccgactggtccgccgaggatcaagcttgtgtcgtcagcg
aataaagagaataaaggggatactaatgccagtgcaaatgggagtgctgcgcagacaaat
gggggtgtgaatggggtggcgaatgggaatagtgaggcttga
DBGET
integrated database retrieval system
