Thermochaetoides thermophila: CTHT_0069830 Help Entry CTHT_0069830      CDS       T03100                                  Name (RefSeq) DNA ligase-like protein   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism cthr  Thermochaetoides thermophila Pathway cthr03030   DNA replication cthr03410   Base excision repair cthr03420   Nucleotide excision repair cthr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cthr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CTHT_0069830    03410 Base excision repair     CTHT_0069830    03420 Nucleotide excision repair     CTHT_0069830    03430 Mismatch repair     CTHT_0069830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cthr03032]     CTHT_0069830    03400 DNA repair and recombination proteins [BR:cthr03400]     CTHT_0069830 Enzymes [BR:cthr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CTHT_0069830     6.5.1.6  DNA ligase (ATP or NAD+)      CTHT_0069830     6.5.1.7  DNA ligase (ATP, ADP or GTP)      CTHT_0069830 DNA replication proteins [BR:cthr03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     CTHT_0069830  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      CTHT_0069830 DNA repair and recombination proteins [BR:cthr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      CTHT_0069830    NER (nucleotide excision repair)     Other NER factors      CTHT_0069830    MMR (mismatch excision repair)     Other MMR factors      CTHT_0069830 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  18261021 NCBI-ProteinID:  XP_006697261 UniProt:  G0SHF4 LinkDB All DBs Position Unknown AA seq 863 aa AA seqDB search MAPKQATLGQFFGQANGTKSKPAPMQQTKLSFATKAKTEEKNDKAKREDDVEDVQPEEDA GGKSPEPKKKRGRPAKSAVAQKDANGVEDEEGESAAPVTKRPRKGRRVVKDDEEDEIMED VLSESDAKQEAKKPPVSAPEPALIKKSEVEERTPESESEVEEAEEELQDEEEKPDVAAKV RQKIQATLKSNVKHPYPDWKEGEPVPYAALCQTFSLIELTSKRLEIMAHCSLFLRQVMRL TPDDLLPTVLLMVNKLAPDYAGIELGIGESLIMKAIGETTGRSLSVIKQDQKEIGDLGLV AVKSRATQPTMFKPKPLTVRGVHKILMDIATVTGNGAQQKKVDFIKKLLSASDVNMKGKA DITKDKGGPSEAKFLVRFLEGKLRLGLAEKTVIVSLAQAMVAHEAWKKGKVPSTADLEKG EQILKQVYSELPSYDVIIPAMVKHGIFNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFE GQTFTCEYKYDGERAQIHYVAKDTGEALSQSASGASKEVGKGVAAIFSRNSEDLSKKYPD VLAKLPTWVKEDTKSFVLDCESVAWDVNEKKVLPFQTLMTRKKKDVKVEDVKVKVCVFAF DLLYLNGEAIVHKSLRERRELMYKAFQPVEGEFAFATHMNSQELEDIQAFLDESVKASCE GLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFL LACYNPIKETYETVCNIGTGFSDSVLEELYKQLSEIVIDRPKPFYSHSSTAQHQPDVWFE PRYVWEVKTADLTLSPRYKAGMYEGVDPSGEKGISLRFPRFIKVRDDKKPDEATSSRQVA EMYRKQESVAKSKGPAVDDDWEY NT seq 2592 nt NT seq  +upstreamnt  +downstreamnt atggcgccgaaacaggcaactttaggccaattttttggccaggcgaatgggacgaagagc aagccagcgccgatgcagcagacaaaattgagcttcgcgaccaaggcgaagacagaagag aagaatgataaagcaaaacgagaggatgatgttgaggatgttcaacctgaagaagacgcg ggcggaaaatctccagaacccaagaaaaagcgggggcgcccagcgaagtcagcggttgcc caaaaggatgccaatggggtcgaagatgaagagggagaaagcgcagctccggtaacaaag cgtccacggaagggcaggcgggtagttaaagatgacgaagaagatgagatcatggaagat gtgctgtctgaatcggatgccaaacaggaggcaaagaaaccccctgtgtcggcccctgaa cccgcgctaatcaaaaagtcagaggttgaggagcggactcccgagtcagaatcagaagtc gaagaggcagaggaagagctgcaggatgaggaagagaagcctgatgttgcggcaaaggtg cggcaaaagatccaggccactctcaagtcgaatgtcaaacacccgtatccggactggaag gagggcgagccggtgccatatgcggccctctgccagacattctcgctcatcgagcttacc tccaagcggttggagatcatggcgcactgctccttgttcctcagacaagtcatgcggctt acccctgacgaccttctgcctactgtcttgctcatggtcaacaagctcgcccctgactat gccggtattgagttgggcattggcgagtcgctgatcatgaaggccatcggcgagacgaca ggccgcagtctctcagttatcaagcaggatcaaaaggagattggtgaccttggtctcgtg gctgtcaagtcaagggcaacgcaaccaaccatgttcaagccgaagcctcttactgtccgg ggcgtccataagattcttatggacattgccaccgtcacaggtaacggcgcgcagcagaag aaggttgatttcatcaagaagttgctttcggcttcggacgtgaatatgaagggcaaagcc gacattaccaaggacaaaggtggcccaagtgaagccaagttcctcgttcgtttccttgag ggcaagctgagactcggtctcgctgaaaagactgtcatcgtctcacttgcccaagcgatg gtggcccatgaggcatggaagaaaggcaaggtgcctagcacagctgacttggagaagggc gagcagattctcaagcaggtctacagtgaattgccgagctacgatgttatcatccctgcg atggtcaagcatggcatcttcaacctgcgggagcactgcaagctacgacccggcgttccc cttaagcccatgctggccaaacctactaaggctatcactgaagtgctggatcgcttcgaa gggcagaccttcacttgcgagtacaagtatgatggtgagagggcccagattcactatgtc gccaaggataccggggaggcccttagccaatcggcctcgggcgcttctaaggaggttggc aagggtgtggcggccattttctctagaaactcggaagacctgtccaagaagtacccggac gtcctggccaagctgccaacatgggtcaaggaggacaccaagagtttcgtgctcgactgc gagtcggtagcctgggatgtcaatgaaaagaaggtgttgccgtttcaaacgctcatgacc cgcaagaagaaggatgttaaggttgaagatgtcaaggtcaaggtctgcgtctttgcattc gacctgctctacttgaatggcgaagccattgtgcataagtcactgcgggaacgccgcgag cttatgtacaaggcgttccagcccgttgaaggcgagtttgccttcgccacgcacatgaac agtcaggagctggaagacattcaggcattcctggatgagtcggtcaaggcgtcgtgtgaa ggcttaatggttaagatgttggacggagaggaaagtggatatgagcctagcaagcgcagt cgcaattggctcaagattaaaaaggactacctctcgggcgtgggtgactcgctcgacctt gttgttttgggcgcttactacggcaagggcaagcgcacctccgtctacggtgcgttctta ctggcctgctacaatcccatcaaagagacctacgaaactgtgtgcaacattggcacgggt ttcagcgactccgttctcgaggagctgtataagcagctctctgagattgtcattgaccgc cccaagcctttctattctcacagctcgactgcccagcatcagcctgacgtgtggttcgag cctcgctatgtctgggaagtcaagaccgccgaccttactctcagcccgcgctacaaggcg ggcatgtatgaaggtgtcgacccgagcggcgagaagggtatcagtttgcggttcccgcgc tttatcaaggtccgcgatgataagaagcccgatgaggctacttcaagcaggcaggttgcg gaaatgtatcggaagcaggagagcgttgcgaagagtaaaggacctgcggtggatgatgac tgggagtattaa

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