Thermochaetoides thermophila: CTHT_0071040
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Entry
CTHT_0071040 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTHT_0071040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0071040
Enzymes [BR:
cthr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
CTHT_0071040
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CTHT_0071040
mRNA degradation factors
5'-3' decay
Decapping complex
CTHT_0071040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
18261142
NCBI-ProteinID:
XP_006697376
UniProt:
G0SFJ3
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MAETKLTLEDWLDDLCVRFIIHLPKEDLSSVARICFQVEEAQWFYEDFIRPLDPTLPSMS
LRSFCLRIFQHCPLLAPFSVENHMRAFEEFLQYKTRVPVRGAILLNEAMDATVLVKGWKK
GANWSFPRGKINKDEDDLDCAIREVYEETGFDIREAGLVPKDDEVKYIQISMREQQIRLY
VFRNVPMDTVFQPKTRKEISKVQWWKLSDLPAYRKKGNGNNHDDGVVASSSSSANNKFYM
VAPFLVPLKKWIAQQKRKDAARAARANNGAQLPGQLPAEEGLTEDDLGAQTEPVPEEAPP
SNNGTPAIETLEGATLELQRLLKVQPPTQGLQVGGQPSGAGKAEALMALLQKKTETPGQT
PQPQRSYDYPTGPDTPQRVPGHADYNQPPASFPIPSSAGQPYSSGYYKQDPQPAPRFPEP
YSHNPFTNQGRDPPLLHPQPMLPQSILTRAILQTPNLPDLSTPSVAPTQQGVYGPPTGGG
YGDVYGPQQPPQQPLQPVQPAAKPQLSAHALSLLNAFKSGSQEGPSAQSSQPASSAPAAV
LATAPGPGPWSQAQPSAVSALPYLSQHLGGAAPQMQTSPRGGADLPIQLPPKPAPPTDAH
RSALLDMFKRGARSPGSPLRNEIKASSFEETVALGRARERECEGEREGTGSGSSSGSKEG
PGQGFNKQPSAAEAIAAANQARGGPVQMNPEVMLPYRAVEILTRPKQQQHHQQQQQQAQQ
AQVGGNVQQEQQQPQPPPQPQQVEDTRETIQRLHQRIQPPGQQRGRAGSGSGVSPRERKS
SGYLFQQAQREQQRELEREREREERSPKVPTGGSPFTISGPGPSTGVAAAAAPQGIPISY
GSQAQQQQQQQQQQQQQQQPPPYNYQSSPAAVYASLSSSYGQSSQSPIALLQQQHQRLAA
SKGKEGTSVEQRQKLLALFGTGASAGAKEGGAGIGVQQPQRRGSGTSAGTGGVSPATSIP
PGFGPGPGAAAGYAAGLYGDDLKGKRRDSAASGSGPGVIGSGMHRSSANTTPQSTGQPAA
TQYQQQPQQRSRVASLAEAIGVPISATSAGASLPGASMPGVMPDALSSSSIPGFIPGIGV
GAGFGPGASMVPPGAPGNASSSAVGGSMSRRASSQTTATGGATISQEDRNFLLMEEMHRK
VNSRTMEDGYSSYEELLFIQACRDIWYCVRIYLMEACRPT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccaagttgacgctcgaagattggctggacgacctgtgcgtccgcttcatc
atccacttgcccaaggaagacctctcgtcggtcgcgcgcatctgcttccaagttgaggag
gcacaatggttctacgaagacttcatccgcccgctggacccgaccctgccgtccatgtca
ctgcgcagcttctgcctgcgcatcttccagcactgtccgctgctggcccccttctccgtc
gagaaccacatgcgcgccttcgaggagttcttacagtacaagacccgcgtgcccgtgcgc
ggcgccatcctgctcaatgaagccatggacgccactgtgctggtcaagggctggaaaaag
ggcgccaactggagcttcccgcgcggcaagatcaataaggacgaggacgacctcgactgc
gccatccgcgaggtctatgaggagaccggcttcgatatccgtgaggccggcctcgtgccc
aaggacgacgaggtcaagtacatccagatctcgatgcgcgagcagcagatcaggctctat
gtcttccgcaacgtgcccatggacaccgtcttccagcccaagacccgcaaggagattagt
aaagtgcagtggtggaagctgtctgatctgcctgcataccgcaagaagggcaacggtaat
aatcatgacgatggcgttgttgcgtcctcttcatctagtgccaacaacaagttttacatg
gtggcgccattcctggtgcctttgaagaagtggatcgctcagcagaagcgcaaggacgcg
gcccgggctgcccgtgctaacaacggcgcccagctgcctggccagctaccggccgaggaa
gggcttactgaggacgatctcggtgctcaaaccgagccggtgccggaggaggctcctcct
tcgaacaatggcacgccggccattgagactctcgaaggcgccacgctcgagctgcagcgt
ctactcaaagtccagccacccacgcaaggcctgcaggtcggtggccagccttctggggcc
ggcaaggctgaggctcttatggctctgttacagaagaagactgagacgcccgggcagaca
ccgcagcctcagcggtcttatgattatcctactggaccggataccccgcaacgtgttccc
ggccacgcggactacaaccagccgccggccagcttcccaatcccgtccagcgcaggtcag
ccttactcgtcgggttattacaagcaagaccctcagccggcgccgcggttccccgagccg
tacagccacaacccgttcaccaaccaaggccgcgacccgccgctactacatcctcagccg
atgctgccgcagtcaattctcactcgggccatcctgcaaacacccaatctgcccgacctc
agcaccccgtcggtggccccgacccagcagggtgtgtacggtccgccaaccggcggcggc
tacggcgatgtctacggcccgcagcagccgcctcagcagccgttgcagcctgttcagccg
gctgctaagccgcaactatcagcccatgccctgtcgttgttgaatgccttcaagtccggc
tcacaggagggcccctcagcacaaagctctcagccagccagctcggcccccgccgcggtg
ctcgctaccgcgcccggcccaggtccctggagccaagcccaaccgtccgcagtgtcggcc
ttgccctacctctcacagcacctgggcggtgcagccccgcaaatgcagacctcccctcgc
ggcggggccgatctgcccatccaactaccgcctaaaccagctccgccgaccgatgcccat
cgctccgcgttgctggatatgttcaagcggggagccagatctcccggttctcctttgcga
aatgagattaaagctagtagttttgaggagacggtggcacttggtcgggcgagggagaga
gaatgtgaaggtgagagggagggtactggtagtggtagtagtagtggtagtaaggaggga
cctgggcaagggtttaataagcagccgagtgcggcggaggctattgctgctgcgaaccag
gcacgtggtgggccggtacagatgaatcctgaggttatgttgccttacagggctgtggag
attctaacgaggccgaaacagcagcagcatcatcaacaacaacaacaacaggctcagcag
gcacaggtgggaggaaatgtgcagcaagagcaacagcagccgcaaccgccaccgcagccg
cagcaggttgaggatacgagagagacgattcagaggttgcaccaacgcattcaaccaccg
ggccagcagagggggagggctgggtccgggtcgggggtttcgccgagggagaggaagagt
tcggggtatttgtttcagcaggcgcagagggagcaacaaagagagctggaacgggaacgc
gagagagaggagcggtcgccaaaggtgccgactgggggttcgcccttcacgatttccggt
cctggcccctctactggcgttgctgcggctgcggctcctcaaggcattcccatctcttat
ggttcacaagcccaacaacaacaacagcagcagcagcagcagcagcagcagcagcagccg
ccgccgtataattaccagtcctctcccgctgcagtgtatgcctcgctgtcgtcatcctac
ggtcagtcctcgcaaagcccgattgcactgttgcagcagcagcatcagaggctggctgcg
tcgaaggggaaagagggtacgagtgtggagcagaggcagaagctgcttgcgctatttggg
actggtgcctctgcgggggctaaagaggggggtgccggtattggtgtgcagcagccacag
agaaggggttctggaacgtctgctggcaccgggggtgtcagtccggcgacgtcgatccct
cctgggttcggcccgggtcctggagccgcggctgggtatgctgccggcctgtacggggat
gacctcaaaggcaagaggcgcgactctgctgcgtccggatccggaccaggtgttattggg
tccggaatgcaccgctccagtgccaacactacaccgcagtccacaggtcagcctgctgct
acgcaataccagcagcaacctcagcaaaggtcgagggttgcctcgctggcggaggcgatt
ggcgttccgatttctgctacttcagcaggtgcttcgctgccaggagcttctatgccgggt
gttatgccggatgctttgtcaagttcctccattccaggattcatccctggtatcggggtt
ggcgctggcttcgggcctggagctagcatggtgccgcctggggctccgggtaatgcgtcg
agcagcgcagttggtggtagcatgtcccggagagcgagcagccagactacggcgacgggc
ggggcgacaatttcgcaggaggatagaaactttttgttaatggaggagatgcatcggaag
gtcaacagtcgaacaatggaggatgggtactctagctacgaggagctgctatttatccaa
gcgtgcagggatatatggtactgcgtacgaatctatcttatggaggcctgccgaccgacc
taa
DBGET
integrated database retrieval system
