Thermochaetoides thermophila: CTHT_0071140
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Entry
CTHT_0071140 CDS
T03100
Name
(RefSeq) putative polyadenylated RNA protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0071140
03041 Spliceosome [BR:
cthr03041
]
CTHT_0071140
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CTHT_0071140
Spliceosome [BR:
cthr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CTHT_0071140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_MUD2_C
RRM_10
RRM_7
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
18261152
NCBI-ProteinID:
XP_006697386
UniProt:
G0SFK3
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAENGPSTATSQLPPPPQPNAGAPGYENGQNTTSNPAHLPPPPLHIPQNTNPIPSAITSP
MGGNNENKTNIMSPTNNAPHFPGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQ
SVKIIPDKNHRGYNYGFVEYDDPGAAERAMQTLNGRRVHQNEIRVNWAYQSNNANKEDTS
NHFHIFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKA
LSSMDGEWLGSRAIRCNWANQKGQPSIHQQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMV
VNQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVECRMQADRGFAFIKMDSHENAAMA
ICQLNGYMVNGRPLKCSWGKDRNPNHHQQFDPNHQYSPQGAQAPGYPGAPGAYPYNQYGG
AYGPPGQQSGYAGPQAQSPAGYGPQMGYNGPPSAGGYGRGQGPAAPWSQPPPAQNFNSGF
AGYQG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacggtccttcgacggctacgagccagcttcctccccctcctcagcccaac
gcgggcgctcctggctatgaaaatggccagaacacgacgtcaaaccccgcacatctgcct
cctcctcccctccatatcccccagaacactaatcccatcccttcagccatcacctctcca
atgggcggcaacaatgagaataagactaatatcatgtcacccaccaacaatgccccacac
ttccctggccgtcgcgcagctcctgagcctaacaagcgcgcgctgtatgtcggaggcctg
gatccccgcgtcacggaggacgtcctgcgtcagatcttcgagacgactggccacgtccag
agtgtcaagattattcccgacaagaatcatcgcggttacaactatggcttcgttgagtac
gatgaccccggcgcagctgagcgtgccatgcagaccctgaatggccgccgggtccatcag
aatgaaatccgcgttaactgggcctaccagtccaataacgcgaacaaggaggatacctca
aaccacttccatatctttgttggcgatctttccaacgaggtcaacgacgaggttctctgg
caagccttctctgctttcggttctatctctgaggctcgagtcatgtgggatatgaagact
ggccgttcccgtggctacgggtttgttgctttccgcgagcgtgctgatgctgaaaaggcc
ctgagctccatggatggcgagtggcttggctcccgcgccattcgttgcaactgggcaaac
cagaagggtcagccctcgatccatcagcaacaagccatgcagcagatggggatgactccg
accacgccatatggccatcatcactttcccacgcacggcatccatagctatgacatggtt
gtcaaccagactccagcctggcaaactacctgctacgttggcaatctgaccccctacacg
acccagaacgatctggtacccttgttccagaacttcggctacgtcgtcgagtgccgcatg
caagccgaccgcggtttcgcgttcattaagatggacagccatgagaacgcggcgatggcc
atctgccagcttaacggctacatggtcaacggtcgccctctcaagtgcagctggggcaag
gatcgtaaccccaaccaccatcagcagtttgaccccaaccaccagtacagcccgcagggc
gcccaggcccctggctaccctggtgctccgggcgcttatccctacaatcaatatggtggc
gcctatggtccaccgggccagcagtctggttatgctggccctcaggcccagtcgcctgcc
ggttacggtcctcagatgggttacaatggccctccgagcgctggcggctatggccggggc
cagggccccgcggctccctggagccagcctcctccggcccaaaacttcaacagcggcttc
gccggctatcagggctag
DBGET
integrated database retrieval system
