Thermochaetoides thermophila: CTHT_0071530
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Entry
CTHT_0071530 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12874
intron-binding protein aquarius
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0071530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0071530
Spliceosome [BR:
cthr03041
]
Complex B
Other components
Prp19-related factors
CTHT_0071530
Complex C
CTHT_0071530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
Aquarius_N_3rd
AAA_12
AAA_11
ResIII
AAA_30
AAA_19
Viral_helicase1
DnaB_C
AAA_16
AAA
UvrD_C_2
DEAD
nSTAND3
SLFN-g3_helicase
RecA_N
AAA_25
AAA_27
NB-ARC
Motif
Other DBs
NCBI-GeneID:
18261191
NCBI-ProteinID:
XP_006697422
UniProt:
G0SFN9
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MPPAKRIKSSADSRPNAGASGRPTLEDLEGENQFTNLARQHWLNVPQQAAKIKVKTDVLK
RELYLWPGYGEDSSNYHVLLIILIVNAKRRERVSTWDIFADRPADFSDLFRRALSMTLDS
SLSWTIRTHVLLFIIHAFQSLDYAIVRKECAPLVSISIWHNLSTEEKREALLDSNPHLRK
AWRAATKRFESADDATKARLRFDRAWLYSLVLDFLTLLYSGNAKQEHVLYCERFVEFLTD
LQSQLPTRRYVNTLLQDLHVLPALSLSPIYNDEGNGLLRELCNLFTHYTYFAVDDQSGVQ
LSREQAYDRHCAILAKLQRIAMKHFKEKLTVLALSNYGSIDKRSELEPLLQALTDDELVQ
LSNLMNIRTSYPDAARIPVDRKFIVEVLLTTFERRKTFQDAAQALSVLPTEETLFDISLK
RTDQYDGSRPLALPKLNLQYLSVGDFLWRSFVLYRCESFYAIRQDLEDALIRLKPEVRRG
GVTGFAGFSKMALPISKPVILDVMPPQVGDDKPSCVKAEVTIDLRRLTPQIRRDWESLRP
DDVVFLLAVDASRQKQSANGGAVLSEAERLGLVHVRAAEIIQVLDDKGKAIRDPQAYFDG
HTRSDIRKIQLRLDATSYKADTEANRNVYEDINLIVRRSSRENNFKPVLESIQDLTLSEV
PLASWLHEVFLGYGDPAGATFKQLPNRLKKINFRDTFLDWQHLVESFPGKIIEPSDDVSS
SFGPPYVLESVEKQVEEHPSKPSKKRRRDVEPALMSKVETLKVSTYKPPNNGPYPVDAPK
LNKIRFTPTQIDAIYSGTQPGLTIIVGPPGTGKTDVAVQIISNIYHNFPEQKTLLVAHSN
QALNQLFAKIVALDIDERHLLRLGHGEEELETEGSFSKHGRVESFLDNRQRFLYEVSRLA
ASMGAPGAHGNSAETAGYFNKVYVEPAWAKFNDIIQREDVGPEDIVRAFPFHAYFSDAPQ
PLFPPEADRETVLEIANGCYRHISKIFEELADVLPFEILRRDKDKANYLLTSEARIIAMT
STHAAMKRGEIASLGFQYDNVIMEEAAQITEIENFIPLALQKPKNGQMALQRVVLCGDHY
QNSPVIQGLAFRHYANLEQSLFSRLVRLGVPTINLDQQGRARPSISNLYRWRYPQLGDLP
HTQTEPEFLTANAGFRYDYQFVNVPDYRGMGESEPTPHFIQNLGEAEYAVAIFQYMRLLG
YPASKISILATYAGQKALIKDVLAHRCAKNPIFGLPRVVTTVDKYQGEQNDYIILSLTRT
TRVGYLRDLRRLTVALSRARLGLYILGRRAVFESCYELRDAFSLLLRRPDKLALVTGELW
PSKRLLADETDDTKKLEGEVVMEGVEHLGQWVFEMTKTKIAELRKEKGLSEEVPVEMPKE
VVSAEADEGYLPLDEEEGDGEEGEGERVKGFEIEDS
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgcgaaaagaatcaaaagcagcgcggattcccggcccaacgctggggcgtcg
gggcggccaactcttgaagatctggaaggagaaaaccagtttacgaaccttgcgcgtcaa
cactggctcaacgtccctcaacaagccgccaagattaaggttaagactgatgtgcttaag
agggaattatacctgtggccaggctacggcgaggattcatcaaactaccatgttcttttg
atcatcttgatcgttaatgcaaagaggcgggagcgcgtcagcacatgggacatatttgcc
gaccgacccgctgatttttcagatctcttccgccgcgcgctatccatgacgcttgatagt
tctctctcctggacaatccggacccatgtgctcctcttcatcattcacgctttccagagt
ctggactacgctattgtccggaaggagtgtgcccctctagtctccatttcgatctggcac
aacttgtcgaccgaggagaagcgggaggccttgttagactcgaatcctcatctaaggaag
gcctggagggctgccacaaaacgctttgaatcagcagatgatgccacaaaagcgcgattg
cgcttcgacagggcttggctatacagcttggtcctggacttcttgaccctgctctactct
ggcaatgccaaacaagaacatgttctatactgcgaacgctttgtggagtttctgacagac
ctgcaaagtcagcttccgacaaggcggtatgtcaatactctgctccaggacctgcacgtt
ctcccagccctcagcctctcccctatctataatgatgagggaaacgggctgctgcgagaa
ctgtgcaatcttttcacccactacacctactttgctgtggatgaccagagcggtgttcag
ctgagccgggagcaggcctatgatcggcactgcgccattctggcgaagctacagcggata
gccatgaaacacttcaaggagaaactgacagtgctggcactgtcgaactatggctcgatt
gacaagcgatctgaactggagccactccttcaagcattgacggatgatgagctcgtgcag
ctttctaatctcatgaatattcgcacatcctatccggacgctgcccggatacctgtggat
cgcaagttcatagtagaggttttgcttactacttttgaacgccgaaagacgttccaggac
gcagcccaggccttgagcgtcctccccacggaagagacgctcttcgacattagtctcaaa
aggactgatcaatacgacggatctcgtccccttgccctcccgaagcttaatctacagtac
ttatcggtcggggactttctctggaggtctttcgtgctgtatcggtgcgagtcgttctat
gctattcgtcaagatctcgaagatgccttgatcaggctaaagcctgaggtcaggagaggt
ggggtgactggtttcgctggtttctccaaaatggcacttcctatctccaaacccgtcatt
cttgacgtcatgccaccccaggttggcgatgacaagccttcctgcgtcaaggccgaggtg
accattgacttgagaagactgacgcctcaaatccgcagagactgggaatctctgcgccct
gatgacgtggttttcctccttgctgtcgacgcctcaaggcaaaagcagtccgcaaacgga
ggagccgtcctgtccgaagccgagaggctaggcttggtccatgttcgcgctgccgagata
atccaggtgctcgatgacaagggtaaggctattcgggatccacaggcatattttgatggc
cacacgcgcagcgatatcaggaaaattcaactgcgtttagacgcaacctcgtataaagcg
gacacggaagccaaccgaaatgtttacgaggacatcaaccttatcgtacggcggagcagc
cgcgagaacaacttcaagccagtactcgaatcaattcaggacctcacgctctccgaggtt
cccctcgcctcctggctacatgaagtcttcctgggctatggtgacccggccggcgctaca
ttcaagcagctgcccaaccggctcaagaagattaatttccgagatacgtttcttgactgg
cagcatctcgtggaaagctttcctggaaagatcattgagcccagcgacgacgtatccagc
agcttcggacctccctatgttcttgagagtgtggaaaagcaagttgaagaacacccttcc
aaaccgtctaaaaaaaggcggcgcgatgtagagccagccctaatgtccaaagtcgaaact
ctcaaggtctcaacttacaagcccccaaacaacggaccttatcctgtggacgcccccaag
ctcaataaaatccgattcacgcctacgcaaattgacgccatctactccggcacacagcct
ggtttgacaatcatcgttggtcctccgggaactggcaagacagatgttgccgtacagatc
atcagcaacatatatcacaacttcccggagcaaaaaaccctcctcgttgctcacagcaac
caggctctcaatcagctctttgccaagatcgttgcgttggatatcgacgaacgccacctc
ctccgtctcggtcatggcgaggaagaattggaaactgaaggaagtttcagcaaacatggt
cgagtggaatccttccttgacaaccggcaacgtttcctttatgaggttagccgcttggcc
gccagtatgggtgctccaggggcccatggcaactcggcagagacagctggttatttcaac
aaggtttatgtagagccagcatgggcaaagttcaacgacattatccagcgagaagatgtt
ggtcctgaggatattgtgcgagcattccccttccacgcctacttttccgatgcgccccaa
cccctgttcccccccgaagccgatcgagagacggttttggaaatcgcgaatggatgctac
cggcacatctccaagattttcgaggagcttgcagatgtactgccctttgagatcttgcgg
cgagacaaagacaaggccaattacctgcttaccagcgaggctcggatcatcgccatgaca
tccactcacgccgcgatgaagcgtggtgaaatcgcttcattgggtttccagtacgacaac
gttatcatggaagaagccgcccagattaccgagatcgagaactttattccgcttgcgctt
cagaagcccaagaacggccagatggcattgcagcgtgttgtcttgtgcggcgaccactac
caaaactctccagttatccagggcctggcgttcagacactacgcgaatctggagcagtcg
ctcttctcacgtcttgtgcgtctgggagtcccaactatcaacctcgatcagcagggccgt
gctcggccttctatctccaatctctaccgttggagatacccgcaacttggagacctgccg
cacacccagaccgagcccgagttcctcacggccaatgctgggttccggtacgattaccag
ttcgtcaatgttccagactacagaggcatgggcgagtcggaaccgacaccacacttcatc
cagaatttgggtgaggccgagtacgctgtggccatctttcagtacatgcgtctgcttggg
tatccagcgtccaagatcagcatcctcgcaacatacgctggccagaaggcgctcatcaaa
gatgtgttggcgcaccggtgcgccaaaaacccaatctttggcctgcctcgcgtcgtcact
acggtggacaaataccagggcgagcagaacgactatatcatcctttcgttgacgcgcacc
actcgcgttggctatctgcgtgacctacgccggctaaccgtcgccctctctcgtgcgcgc
ctgggtctgtatatcctgggtcggcgcgccgttttcgaatcctgttacgagctgcgcgac
gccttttccctgctgttgcgtcggccagataagttggcgttagtgacaggtgaactgtgg
ccatcgaaacgtctgctggccgacgagactgacgacaccaagaagctcgaaggcgaggtc
gtcatggagggcgtggagcatctgggtcagtgggtgtttgagatgaccaagacgaagatc
gctgagctcaggaaggagaagggtctgtctgaagaggtgcctgttgagatgccaaaagag
gtagtaagcgccgaagcggatgagggatatctcccgctagatgaagaggagggcgacgga
gaagaaggcgaaggcgaaagggtgaaagggtttgagattgaggactcataa
DBGET
integrated database retrieval system
