Thermochaetoides thermophila: CTHT_0072720
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Entry
CTHT_0072720 CDS
T03100
Name
(RefSeq) putative ribosome assembly protein
KO
K14848
ribosome assembly protein RRB1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0072720
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CTHT_0072720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_EIPR1
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_C
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
18261310
NCBI-ProteinID:
XP_006697530
UniProt:
G0SFZ7
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MPKRQAEDEKAAGPLKGGERPDAMDVDDKDNDMGEFEDEFEDEFSEEEIIEAGVDGRPDT
EREAEEMEVDSAAPETFIVGRTKLEPGQTLVPDASTYRMLHHLSTPWPCLSFDIIRDGLG
DNRSVYPVTMYTVAGTQADSARANDNSIMVMKFSGLSKMQGGGDDSDSDTESSDDDDEDD
DPILEHKSIPLTSTTNRIRAHQTPSQDSSKPPITLVATMTESSNVLIHDITPHLTSFDTP
GTVITPQQNKPVCTIRAHKVEGYGIDWSPLHPAGKLLTGDCEGIIYMTTRTDGGGFVTDT
RPFVGHQGSVEEIQWSPSEASVFASASTDGTVRVWDIRSKARKPAITMKISDVDVNVMSW
SRLTTHLLASGDDAGVWSVWDLRQWKPGAAGAAGAASSVGKPTPIASFNFHKEQITSVEW
HPTDDSIVAVSAGDNTVTLWDLSVELDDEESKDTGGVQDVPPQLLFVHYQNLAKEVHWHP
QIPGVLVATGEEFSVFRTISV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtcaagcagaagacgagaaggccgccggcccactcaaggggggggagcgc
cccgacgccatggacgttgacgacaaggacaacgacatgggcgagttcgaggatgagttc
gaggatgagttcagcgaggaggaaattatcgaggccggcgtcgacggcaggccggacact
gagcgggaagccgaggagatggaagtagattccgctgctcctgaaaccttcattgtcggc
aggacaaagctagaacccggccagacccttgttcctgatgcgagtacctaccgcatgctg
caccaccttagcacgccctggccgtgtctctcgttcgacatcattcgcgatggcttgggc
gataaccgctccgtttatcctgttactatgtacacagtcgccggtacgcaggccgatagt
gcgcgcgccaatgacaactccatcatggtcatgaagttcagtggcctcagcaagatgcag
ggcggcggcgatgacagcgacagcgatactgaatccagcgatgacgacgacgaggacgat
gacccaatcctggaacacaagagcatccctctaacctccacaactaaccgaatacgcgcc
caccagaccccctcgcaagattcatccaagccccccatcacactggtcgcaaccatgacc
gagtcttctaacgtcctcatccacgatatcaccccccatcttacttcgttcgatacccct
ggcactgtcatcaccccacaacagaacaagcctgtgtgcacaatccgggcgcataaggtc
gagggctacggcatcgattggtcacctttgcatccagctggcaaactgctgactggcgat
tgtgagggcataatctacatgaccacccgtaccgacggcggtggtttcgttaccgataca
cgccctttcgtcgggcatcagggcagtgtcgaggagattcagtggagtccctcagaggca
tctgtctttgcgtctgcgtctaccgacggtactgtgagagtttgggacatccgcagtaag
gcgcgcaagccggccattactatgaaaattagcgacgtcgatgtaaacgtcatgtcatgg
tcgcggttgaccacgcatttgctggcatctggcgacgatgctggggtgtggtcggtgtgg
gatcttagacaatggaagcctggcgctgccggcgctgccggcgctgcttcctcagtcggc
aagccaacacccattgcaagcttcaacttccacaaggagcagatcaccagtgtggagtgg
cacccgacagatgacagtatcgtggccgtgtcggctggcgacaacaccgtcacactgtgg
gatttgtcggtcgagttagacgacgaggagagcaaagacacaggcggtgtgcaagacgta
ccgccacagcttctgttcgtgcactaccagaatctagccaaagaggtgcactggcatccg
caaataccgggtgtgttggttgccactggagaggagtttagcgtgtttagaacgattagc
gtatag
DBGET
integrated database retrieval system
