Thermochaetoides thermophila: CTHT_0072880 Help Entry CTHT_0072880      CDS       T03100                                  Name (RefSeq) hypothetical protein   KO K14772   U3 small nucleolar RNA-associated protein 20 Organism cthr  Thermochaetoides thermophila Brite KEGG Orthology (KO) [BR:cthr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cthr03009]     CTHT_0072880 Ribosome biogenesis [BR:cthr03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     CTHT_0072880 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UTP20_N UTP20 UTP20_C Htt_N-HEAT_1 TAF6_C Motif Other DBs NCBI-GeneID:  18261326 NCBI-ProteinID:  XP_006697546 UniProt:  G0SHP3 Structure PDBPDBj LinkDB All DBs Position Unknown AA seq 2612 aa AA seqDB search MPSATSGRILKTSRGSKKTPHQKNHRWESFSQKISKLHSLDPLRKVRRHDLDAEDLSVTT SYLRNGLDKWAELNISRPYQAFKREINPLTESLAQILYHEDRIMDLLVEYISRHEKEALE PLLDLVTAFAHDLGVRFEKHYPRALSLIVDLAGSMHDVEVIEWTFAALAFLFKYLSRLLV PDLRPTYDVVAPLMGKAKHPGHIARFSAEAMSFLVKKAAAPSHKDKALSLFIEHVKKDLE SMVGTKQFDLYSQGIMTMFAEAMKGVGEGLHSTAPDLFSALMRAVPKEELSLPERTVWSD VCCGVITSVIHHSNTDTFNTVESRVVDDAMACQQQVLFIRVFGTMAGVRKGTRIHDWASF AKALNQMLVSLGTQAKQIEVMDSSRVWKHIIVNSAIVWSRAPMDALIPAMSTFQTAMTKE PWMKWYIPFCSYLADQNAERFRGLFLKEFQKFIVAHWSQGNNEDLLCVLIPRMVESGGLP APGSKEIFPLPQSWQDQIVSKFVRLEDTPFPESGGFGKDPETWRDKCLPKYSARLRVLKS TTVHPSTNSRIAEVLLKKLKLALRPSSSLPTDEANFITSDGFHAYLRMCKAPGSIDPSLA PLLRAAAPRFCRSPSFLQALLAYEQEIKAKGKNTPESDSGAESSHEEHEPLINCLIANLS SPSHELRLASLQILEVLDFTPDSNNALSIMIQTEEMPLNLQSVRAIGAHLRRLGLVYSHI EQDSWLARAVPSFLWGMMTVPLAPVWDDAVEAMKKVAESKHGEEVLANIAFDWLDVPSPQ WSGPYKPPADDNHGPLTNFECLNLIHLTEAAEATNQIIEEPGQDMLSTYEEGQKIIDLRS ERARSKALKALAALPWMAERRSRKLVPHLFAFTDDSETPEEDIEEESPESGEGSWNLADR KDLIKVFSQFSNPRVLYLSQKVYQALLKLLANGDIELQKLALKAILTWKSEGIKPYQEHL EYLLDEARFKNELTVLFQGDNKILPEHRSEVIPVLLHLLYGRAISRKGAASGRHGLHATR LAIIRQLDVEDMGSFLDIGLGPLRAIRVVDEQGVRESVFAHEPLPPRKQVGLLNMLEAVI NELGTSVEPYMDALVNSVLYCLVNACRKLGVSAEEPESGEGGQIENESLYRVIRTTALKS LSRLFQNAPDFNWVPYRELMVKEIISPRIEKLPVESTQGVSATWRLMATWSSLPKAAPFL NVDKRILPKIVETLSIEKAKDEVKVFALDILKNLINLAQAPETESQFNELIKTELLDPNT DLILKTIGGVLHGQSDIGRELLSSAVDTVVVFAPMIEVSSHIQDMLEIATWLLNQPLRKV NPKVKGAILLILKRFIELDDLQSNQELQRKVYSTISALFGFFKDKQNRQTLAEVLDVFAR REVWAQEVSDICRGLNSYVEQRLDEPDYNTRLAAFNSITKDRDKPFTLDQWMPLVHNLLY FIQQPEEFGVLSSNSADGLCKFISAVESVWATPDQAAWIDVVANIILPAIYAGSRDPSET VRREILRVFGFLVSHLPQWELVADLTCLVPESEDSDEAFFFHIMSPAVSRQLQALRVLEA ANDKREFRSKHISQFFIPLFEHFIFDRPEGGDDHGLSAQATNTIAALTLSLEWQQYRAIL RRFISYVESKPDWQKRVVRLLEKEVDALRTAVASKKPADAMEVDGEAKPRRLASTLPDQE KLGAEIVNNFLPTLLNYIHEKDETNVSARVPVGVIIAKLLTLLPDQLLNEKLPGVLTDIC HILRSKAWESREMARDTLSKIAGILGPEKFEFIVRELRGSLQKGYQLHVLGYTLHSILLV AIPSFPQGSLDYCLGIIMTVIMDDIFGVTGQEKDAEDYVSSMKEVKSSKSQDSMELLAKT ASITRLSELTLPLQSLLMEKLDLRTVRKIDELLLRITKGLLENPAAASQEVLVFCYEVIQ EVYRSQKPEELPKMDPRLKRFIVQKAAKKSDGAVTAKHTYKMTRFAIDILRAVMKKHDHL RTAANLIGFLPVLGDAVLAVEEEVKVSAFKMLTVIVKVPFKNNESNGLYKVAHKEAIKSI AMSSSTQSELAQAALKLISVILRDRRDIQMREAALDMLLSKLKDDLTEPLYRHVTFNFLR SVLDRKLETASVYDTLDHVGTVMITNDDKDTRDLARGAFFQFLREYPQKRNRWEKQLKFI VANLKYEREGGRLSVMECINLLLKKSADEFTQEVAATCFIPLVFVLANDDSDKCRLAAGE LIKETFRVADKERQSRFLTLLRGWIAQDGNMAVVKLALHAFGLYFEGREPSAKDINDLTL VYDKLVNVLGDEKALEDDWELAHVALGTLRTLVLKHPQKVLSGDATDLWAEVQALLAHSH TEVKLSAIRLLSMYLADFAKNTTKGAKLPLSGSHGLQLDTDDVTDLVRLSLGILSAPEVD EALAQEVAQVLLFLGGYLELAGEDDEEEGDEAEEDEANDAKERAHTADVRYLFWKLASII RKERPPKPEVLVSKHVAMDLVEAFCNRVSVETIMASIKTILRPLRNLTDPSIKPPHSLND IFRQRYDELKNKAQTVMELLQRRLGSAEYTKALLAVSEMVREKRQQRSTKRKIEALTAPE KYGREKRKKFEKKKERRKIKGREARELRKLYH NT seq 7839 nt NT seq  +upstreamnt  +downstreamnt atgccgtctgcaacatcgggccgcattctaaagacgtcgcgggggtcgaaaaagaccccc catcagaagaatcatcgatgggagtccttcagtcaaaagatctctaaactccattcccta gaccccctccgcaaggtccggcgacatgatctcgacgccgaagacctttccgtaacgacc tcgtatcttcgaaatggcctggacaaatgggccgagctcaacatctcccggccgtaccag gccttcaaacgggagatcaacccacttaccgaatcgctagcgcagatcctctatcacgaa gatcgcatcatggacttgcttgtcgagtacatctcccgccacgagaaggaagcgcttgaa ccgctactagatttggtcacagcgttcgcgcacgatcttggtgtccgttttgagaagcat tacccgagagctctctccctgattgtcgacttggccggttcaatgcacgatgtcgaagtc attgagtggacattcgctgcgcttgccttcctcttcaagtacctttcgagattacttgtt ccagacttgcgccctacatacgatgttgttgcacctctgatgggcaaagcgaaacaccca ggtcacatcgcccgcttctctgctgaggccatgagcttcttggtcaagaaggctgccgcc cctagccataaggacaaggcgctgtctctgtttattgaacatgtgaagaaggatctggag agcatggttggcacgaagcaattcgacttgtacagccagggtatcatgactatgtttgcc gaggcgatgaagggtgttggagagggtctgcactccacagccccggatctcttttccgcg ctgatgcgcgctgtaccgaaagaggaactgtcactgccagagcggactgtctggtcagac gtctgctgtggcgtgatcacgagtgtgatccatcattcaaacacggacacattcaacaca gtcgagagtcgagttgtcgacgatgcaatggcttgccagcagcaagtcttgttcatccgt gtctttggcaccatggctggtgtgcggaagggcacgcgcatccacgactgggcttcgttt gccaaggcattgaaccagatgctcgtgtctctgggtacccaagcaaagcagattgaagtg atggactcttctcgggtatggaagcatatcatcgtcaattccgccatcgtgtggagccgg gctcccatggacgctctcattccagcgatgtccacattccaaactgccatgaccaaggag ccgtggatgaagtggtatattcccttctgttcttatttggccgaccagaacgctgagcgt ttccgtggcctgtttttgaaggaattccagaagtttattgttgcacattggtctcaaggt aataatgaagacttgctctgtgtccttatcccccggatggtagagtctggaggtctaccc gcccctgggagcaaagagatcttcccactcccacaatcatggcaggaccagattgtgagc aagttcgtaaggctcgaggacactcctttcccagaaagtggtggatttggaaaggatccc gaaacctggagagataagtgcttgcccaaatattcggctcgtttgcgtgtcctgaagtcg accactgtccacccctctaccaactcccggattgccgaggtactccttaagaaattgaag ctcgctctccgcccgtcctcctctttgccgaccgacgaagccaacttcatcaccagcgat ggcttccatgcctatctccgcatgtgcaaggcacctgggtcgattgatccgagcctggcg cccttgctcagagctgctgccccacgattctgccggtcaccatctttccttcaagctctc ctggcctatgagcaggaaatcaaggccaagggcaagaatactcctgaatcggacagtggt gctgagagctcacatgaggagcatgagcctttgatcaactgccttatcgccaacctctct tcaccttcccacgagttgcggcttgcttcgcttcagatcctcgaggtcttggatttcaca cctgactcgaacaatgccctaagcatcatgatccaaacagaggagatgcctctgaacttg caaagtgttcgtgccattggcgcgcatctccgcaggctcgggctggtatactcccacatt gagcaggactcttggttggctcgggctgtgccgtcctttttgtggggcatgatgaccgtc cctcttgcgcctgtttgggatgatgccgtcgaggcgatgaagaaggttgcggagagcaag cacggtgaagaggtattggccaacattgccttcgactggttggacgtgccgtctccccag tggtctgggccctacaagccgccggctgatgataatcatgggcctcttaccaatttcgag tgtcttaatctcattcacttgaccgaggcggctgaggccacaaaccaaatcattgaggaa cccggacaggacatgctctctacctatgaggaaggccaaaagatcatcgatctgcgatcg gaaagagcaaggagcaaggctctcaaagcgcttgctgccctgccttggatggcggagaga cggtctcgtaagctagtgcctcacctgtttgcctttactgatgacagtgagacgccagag gaagatatagaggaggagtctccggagtcaggcgaggggagctggaatcttgccgacagg aaggacctcatcaaggtgttttcgcagttcagcaacccacgcgtgctttacctgagccag aaggtttaccaggctctgctcaagcttttggcgaatggtgatatcgagctgcaaaagctg gctctgaaggctatcctgacctggaagagcgagggcatcaagccgtatcaggagcacctc gagtacctgctcgatgaagccaggtttaagaacgagctcacggttctgttccaaggcgac aacaaaatcctgcctgagcatcgctccgaggtcattcctgtcctcctgcacctgctctat ggtcgtgcgatttcccgcaagggcgcggcaagtggtcgccatggtcttcatgccactcgt ctggccatcatccgccagcttgatgtggaggatatgggcagcttcctggatatcggcctg ggccctcttcgtgccattcgtgtcgttgatgagcaaggcgttcgggagagtgtgtttgct catgaaccccttccaccgcgcaagcaggtcggtctgctcaacatgcttgaggccgttatc aacgagcttggcaccagcgtcgaaccctacatggatgctctcgtcaactcagttctctac tgcctggtcaatgcctgcaggaagcttggcgttagcgccgaggagccagagtccggggaa ggcggacagattgagaatgaatccttgtacagggttatcaggacgacagcactcaagtcc ctgtccaggctcttccagaatgctcctgacttcaactgggtgccgtaccgcgaacttatg gtcaaggagatcatcagtcccaggatcgagaagctcccggttgagtcaactcagggtgtg tccgctacctggaggctgatggccacctggtcttctctgccgaaggcagcgccgttcctc aatgtcgacaagcgcatcctgcccaagatcgtggagacactttccattgagaaggcaaag gatgaggtcaaggtgtttgcacttgatatcctcaagaatctcatcaatcttgcgcaggcc ccggaaactgagtcccaattcaatgagctcatcaagactgagctcttggatcctaatact gacctcatcctcaagaccatcggcggcgtgctgcatggtcaatccgatatcggccgcgag ctcttgtccagcgccgttgacactgtcgtcgtattcgcgcccatgatcgaggtgtcttcg catatccaggatatgctagagattgctacttggctgctcaatcaacccttgcgcaaggtt aaccccaaggttaagggcgctatcttgttgatcctcaagcggtttattgaactcgacgac cttcagagcaaccaggagcttcagcgcaaggtctacagtaccatttctgctctcttcgga ttcttcaaggacaagcagaaccggcagacgcttgccgaggtcctcgatgtgtttgccagg cgtgaagtgtgggctcaggaagtgtcggatatctgccgtggtctcaactcctatgttgag cagcggctggatgagcctgattataatacccgccttgcggctttcaactccattaccaag gaccgtgataaaccattcaccctcgaccaatggatgccactcgttcacaacctcctctac ttcatccaacagcccgaggaattcggtgtcttgtcctcgaactcggccgatggcttgtgc aagttcatctccgctgttgagtctgtctgggctactcccgaccaagcagcatggatcgat gtcgtcgcgaacatcatcctgcccgctatctacgctggttccagagacccatcggagact gtccgccgcgagatcctgcgtgtcttcggcttcctggtctcccatctcccccagtgggag ctggtggctgacttgacctgcctggtccctgagtcggaagactccgatgaggctttcttc ttccatatcatgagccctgcggtgtcgagacaactccaggctcttcgcgtgcttgaggcc gctaatgacaagagagagttccgcagcaagcacatcagccagttcttcatcccgttgttt gagcacttcatttttgatcgacctgaaggtggtgatgaccatggcttgagtgcgcaggct acgaacaccatagcagcgttgactctgtctttggagtggcagcagtaccgtgctattttg aggcggttcatttcctatgtcgagtctaagcctgattggcagaagcgcgttgtgcgtctt ctggagaaggaggttgacgctttgcgaacggccgtcgcctccaagaagcccgctgatgcc atggaagttgatggcgaagcgaagccgcgtcggcttgcctcgactctccccgaccaagaa aagcttggtgctgagatcgtcaacaacttcctgccgacgctccttaactacattcacgag aaggacgagactaacgtcagcgctcgtgtccctgtcggcgtcatcatcgccaagctcctt acgctcttacccgaccagttgctcaatgagaagctgcctggtgtccttaccgacatctgc cacattcttcgcagcaaggcctgggagtctcgcgaaatggcccgtgacacgctctctaag atcgcgggtatcttgggcccggagaagttcgagttcatcgtcagagaactgcgcggttct ctgcagaaaggctatcagctgcacgtccttggctacacgctgcactcgatcctgctggtt gccatcccatccttccctcagggttccctcgactactgcttgggtattatcatgaccgtc attatggacgatatcttcggtgtaactggtcaagagaaggatgcggaggattatgtcagc tcgatgaaggaggttaagagcagcaagagtcaagactcgatggagcttcttgccaagacg gcgtccattacacgtctaagtgaactaaccttgcctcttcagtcgttgctgatggagaag cttgacctgcggactgttcgcaagattgatgagctcctgctccgcatcacgaagggcctt ctggagaacccagcggctgcttcccaagaggtcctggtgttctgctacgaggtcatccag gaggtctacaggagccagaagcccgaggaactgcccaagatggacccccgcttgaagaga ttcatcgtgcaaaaggcggccaagaagagcgacggcgctgttactgccaagcatacgtac aagatgacccggttcgcgatcgatattcttcgtgctgtcatgaagaagcacgatcatctg cgcacggcggctaaccttatcggctttctgccggttctcggtgatgcagtcttggccgta gaggaggaagtcaaggtttccgctttcaaaatgctcaccgttatcgtcaaggtacctttc aagaataacgaatcgaacggcctgtacaaagtcgcgcacaaggaagccatcaagtccatc gcaatgtcctccagcacacaatccgaacttgctcaggccgcgctcaagttgatatctgtc atccttcgcgaccgtcgcgacatccagatgagggaagccgccttggacatgcttctcagc aaacttaaggacgacctgacggagcctctctaccggcacgtcacattcaacttcctgcgt tccgttctcgaccgcaaactagagactgcatccgtctacgacaccctagaccacgtcggc acggtgatgatcaccaacgacgacaaggacacgcgcgacctagcccgcggcgcgttcttc cagttcctgcgcgagtacccgcagaaacggaaccgctgggaaaagcagctcaagttcatt gtggctaacctcaagtacgagcgtgaaggtggaagactctcggtcatggagtgcatcaac ctgctgctgaagaagtcggcggatgagttcacgcaggaggtggcggccacgtgcttcatc cctctcgtgttcgtgctggccaatgatgacagcgataagtgccggttggcggctggggag ttgatcaaggagacgttccgcgtggccgacaaggagaggcagtcccgcttcttgacgctg ctccgaggttggattgcgcaggatgggaatatggccgttgtgaagcttgcgctgcatgcg tttgggctgtactttgagggtcgggagccgagtgctaaggatattaatgacctgactctt gtttacgacaagcttgtcaacgtcctgggagatgagaaggctctggaggacgattgggag ttagcccacgttgccctgggcaccttacgcaccttggtccttaagcacccgcagaaggtc ctgtccggggatgcgaccgacctctgggccgaagtccaggccctcctggcccactcccac actgaagttaaactcagcgccatccgactcctcagcatgtaccttgccgactttgccaaa aacaccaccaagggagccaagctgcccctttccggctcccatggcctgcagctcgacacg gacgacgtgaccgaccttgtccgtctctccctcggcatcctgtccgcgcccgaagtcgac gaggccttggcacaggaagtcgcccaggtcctgctcttcctaggcgggtacctcgagctg gcgggcgaggacgacgaagaagagggcgacgaggccgaggaggacgaggccaacgacgca aaggaacgcgcgcacaccgcggacgtgcgctacctcttctggaagttggcgtctattatc cggaaggaaaggccgccgaagccggaagtgctcgttagcaagcatgtggcgatggatctg gtcgaggcgttttgcaatcgggtgtcggttgagacgatcatggcgtctattaagacgatc ctaaggccgctgaggaacttgacggatccgtcgatcaagccgccgcactcgttaaatgat atcttccggcagcggtatgatgaattgaagaacaaggcgcagacggttatggagctgttg cagaggaggctgggtagtgccgagtatacgaaggcgttgcttgcagttagcgagatggtg cgggagaagaggcagcagaggtcgacgaagcggaagattgaggcgcttacggcgccggag aagtacggccgggagaagaggaagaagtttgaaaagaagaaggagaggaggaaaattaag ggtagggaggccagagagttgcggaagttataccattag

DBGET integrated database retrieval system