Thermochaetoides thermophila: CTHT_0073250
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Entry
CTHT_0073250 CDS
T03100
Name
(RefSeq) putative cleavage and polyadenylation protein
KO
K06100
symplekin
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTHT_0073250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0073250
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0073250
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CTHT_0073250
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CTHT_0073250
U7-dependent histone pre-mRNA processing factors
CTHT_0073250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
18261363
NCBI-ProteinID:
XP_006697582
UniProt:
G0SHT0
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MADNPTDSGGPAAAADTNSSNSPKTLSVAEQLEQLNAARKLVLEQPAYYDRIVKGVLPII
GPNAALPLRRWGAEFLAESLATPVLSTRDKENLVIAVLDTLRSLLEGVGEDLIVLKACVG
AAASAYPVTLRWIIHNSYYAEPWEQMTAIKSRILNIWDSAPAPIKISCIKFAQRVVLAQT
ASNGMEQKYNGLDVSLNMIPPNHNLLDPRHLEAEATGLLDRMLGVLQDNSSNALMVDATL
NCLSILIRTRPSTSNRIINAILNFNPLKLATMSPMTPTTRMHVKSMEKTTRMFLTHLIKR
DPANPFNGRIQQYLERLMRAKAELLDDARKRALSEQGYPMDAKRQKVEGAVPFVVPPLGP
GPHSLASVFTLTNNAGLQAFDATLIPAPLAAKISIRALATISPAVIDAAINGVRDRLAAL
YAAGASDAAAATAAVAPSVLNPATAPLGVDDDDDDYEPDLTPAEDTEQILNKLDNAPPEV
PLEEENHEDSAALALGPFKLPSPPATDADSASKAVPSLATRLFELLPHLKESAGRKKAGF
NRLAGSQDDRDWFATVIIRLATRGTSNLSGLFPSERALIKQEDGTVRPGLGDAIREILYN
HVFEDWRRNIDTAIAWLTEEWYCDQVAKATAAGNGASLQMHYEKWALRVMDGFINYITAQ
DKLLTRFLAEIPELTRPLLGKLKVLCEDPTTVQLALTSLLYLVMTKPPAKELALDMVGEI
WTEYEDARPLAAKYLVKYRPGWIEAQLSRSNGN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatcccaccgacagcggtggccccgccgctgccgctgacaccaattcctcc
aacagccccaagaccctctccgtcgccgaacaactcgaacagctcaacgcagcacgcaag
ctggtcctcgagcagccagcctactacgatcgcatcgtcaagggcgtgctgcccattatc
gggcccaacgctgccctcccactccgccgctggggtgccgagttcctcgccgagtctctc
gccactcccgtcctgagcacccgtgacaaggagaatcttgtcattgctgtgctggatact
ttgcgcagtttgctagagggcgtgggcgaggatctgatcgtgttgaaggcttgtgttggg
gctgcggccagcgcgtatcctgttacgctgaggtggatcattcacaactcctactatgct
gagccgtgggagcagatgactgccatcaagtctagaatcctcaacatctgggatagtgcc
ccggctcctatcaagatcagctgcatcaagtttgctcagcgagttgtcctggcccagact
gcttctaatggcatggagcagaagtacaatggcttggacgtctcactcaacatgatccca
cccaaccacaatctcctggatcctagacatcttgaggcagaggctactggcctgctggac
cgaatgctgggtgtcttgcaggataacagcagcaatgctctgatggttgacgctacgctc
aactgtctgtccatcttgatccggactcggcctagtacctccaaccgcatcatcaatgcc
attctcaacttcaaccccctgaagttggctaccatgtcacctatgacccctaccaccagg
atgcacgtgaagtccatggagaagactactcggatgttcctcactcatctcattaagcgc
gatcccgccaaccccttcaatggccggattcagcagtacctcgagcgccttatgcgcgca
aaggccgagctcctcgatgacgcacgcaagcgtgctctgtccgaacagggctatccaatg
gatgcaaagcgtcaaaaagtggagggcgcggtaccctttgtggtccctcccttgggacct
ggcccgcacagcttggcctccgtcttcaccctcaccaacaatgccgggttgcaagccttt
gatgcgaccctcatccccgcccctcttgccgccaagatcagcatcagggctttggcgact
atctcccccgcagtcatcgacgccgccatcaatggggtccgggaccggctggctgctctc
tatgcagccggcgcgtctgatgctgctgctgccaccgcggcagttgctccctctgttctc
aaccccgccacggctcctctgggtgtcgatgacgacgacgatgactacgagccagacctc
accccagctgaggataccgaacagatcctcaacaagctcgacaacgccccgcctgaggtc
cctctcgaggaagaaaaccatgaagacagcgccgccctagccctgggccccttcaaactt
ccctctccccccgccaccgacgccgactccgcctccaaggccgtcccgagcttggctacc
cgcctcttcgagctgcttccccatctcaaggaatccgcgggccgcaagaaggctggtttt
aatcgtcttgctggcagccaggacgaccgcgactggttcgcgacggttatcatccgtctc
gcgacgcgcggcacctcgaatctcagcggcctattcccgtcggagagggcgctcatcaag
caggaggatggtaccgttcgtcccgggctgggtgatgctatccgagagattttgtacaac
catgtgttcgaggactggaggaggaatattgataccgcaattgcgtggttgacggaggag
tggtactgtgatcaggttgcgaaggccactgccgccgggaatggggcctcattgcaaatg
cattatgaaaagtgggcgctgcgcgtgatggatggttttattaattacattacggcgcag
gataagctgctgacaaggttccttgcggagattccggagctgacgaggccgcttttgggg
aagctcaaggtgctctgtgaggatccgactaccgtacagctggcgctgacgagcttgttg
tatctggtcatgacgaagcctccagcgaaggagttggcgttggatatggtgggggagatt
tggacggagtacgaagatgcccgccccctggcagccaagtacctcgtcaaatatcgccct
ggctggatcgaagcccaactttctcgttccaacggcaactaa
DBGET
integrated database retrieval system
