Thermochaetoides thermophila: CTHT_0073630
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Entry
CTHT_0073630 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03440
Homologous recombination
cthr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTHT_0073630
03450 Non-homologous end-joining
CTHT_0073630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthr03032
]
CTHT_0073630
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0073630
DNA replication proteins [BR:
cthr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CTHT_0073630
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CTHT_0073630
BRCA1-C complex
CTHT_0073630
NHEJ (non-homologous end-joining)
MRX complex
CTHT_0073630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_15
Crescentin
AAA_29
AAA_16
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
18261401
NCBI-ProteinID:
XP_006697619
UniProt:
G0SHW7
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MSKIEKLSILGVRSFGPHHPETIAFNTPLTLIVGYNGSGKTTVIECLKYATTGELPPNST
RNGAFIHDPDLVGEKEVRAQVKLSFRSTIGESYVVTRNIQLLVQRNNKRTQKTLEGSLLL
RNNGERTVISTRVAELDKLVSEKLGVPPAILDAVIFCHQDDSLWPMSEPAALKKRFDEIF
EAQKYTKVIENIRLLKKKKGDELKILKEREVQDKANKERAEKVDRLMAQLTREILEAREK
CNELSKQMEEESAKIKDKYEQANSFLKIMNDLQTKTEKLEYKKDAIVELRSRIEELPDPD
EVLRNTLDEYEQTINRIVADRDHKAAQFHDLQAELKSARDQHTAKAAEQGKHQSDKEKYE
RQLVARERMIREAAERHEIRGYNGDLDDRRIAIFNERIQKILNDKRRELERLQRENQEEL
DRKTAVIAERESRKQSVIRDRKAAKDRIISLGKDMASIQGELSSIDIDEGTEEMLRAEMK
ELQARIEAAKADEQNANLDAQIKEVNEEIWKLESLSAKLARELVECTRLASERAQLDLRR
KQLAERKRELEIMTNTWNEQFSTLLGEGWRPETLERDFSDVLKQQQLLVGEHRKKKDATQ
QELKQAEYQLSNARNLHNKLTNEMEACMRAVQTAMKEARDLDSAPPVDEYITMLETDEKE
LAEVETALKLYDELKKHYSTIKDRALRFNKCYICDRDFTNQEAAKTRLLEKVAKRLGDEE
KKELLEDQAAFMKSLDILRAVRVKYDTYQRLSSELPQLSREIDSETNRREDLVRRLEDQD
LAFREADNKLQEMETLNKHVMKITQLLKDISDAEKQVERSQQLSNIETRSADEINEEQTT
CAEQTRAAQAKLTKLTAEKQRLKDLVRQLEVERLQLENKISSAVQQLERKKRLQESIARH
KEDQNQARNAVQEADEELERLEPEIAGARAALDEARQACRAKEQKVAAERDAIAQTVSEL
NMINSEIQEYLDRGGPSSLAANQRAIANLETQMANLEGEMRELTVQINKLNKEIDNSDAK
KRNIADNLTYRKNLREKDALEREIAELEARNAQEDYDRLIKEAHYLEAHRSKLNADRERL
MGMMSTKDEEFRRLNEEYELDLKDAKAKYKETHIKVETTKAAIEDLGRGMAAVDHAIMQY
HSKMMEQINRTIAELWQSTYQGTDIDTIQIRSDVESTTSSDSGTRRNYNYRVSMVKGDTE
MDMRGRCSAGQKVLASIIIRLALAESFCANCGLIALDEPTTNLDSDNIRSLAESLHGIIK
ARQAQGNLQLIVITHDEEFLKYMQCSDFCDDFYRVKRDEKQNSVIVRESITRITE
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcgagaaactctccatcctgggagtgcgctccttcgggccgcaccaccct
gagaccatcgcgttcaacactccactcaccctgattgttggttataacggctctggtaaa
acgactgtcattgaatgcctgaaatatgccactaccggcgagctgcccccaaacagcacc
agaaatggcgcattcattcacgatccggacttggtcggcgagaaggaggtgcgcgcccag
gtgaagctctcgttccgctcaacgatcggcgagtcctacgtcgtcacccgcaacatccag
ctgttggtgcagcgcaacaacaagagaactcaaaagactttggagggcagtctgctgctt
cgaaataatggagagcgtaccgttatctctacccgtgtggccgagctggacaagctggtc
tcggagaagctaggagtccctcctgctatcctcgatgccgtcattttctgccatcaggac
gactcattgtggcccatgagcgagccggctgcgctgaagaagagattcgatgagatcttt
gaggcccagaaatacaccaaggtcattgagaatatccgtttgctcaagaagaagaagggc
gacgaactcaagattctcaaggagcgcgaggtgcaagataaggcgaacaaggagagggcc
gagaaggtcgatcgcctgatggcccagctgactcgggaaatcctggaagcgcgcgagaag
tgtaacgagctctcgaagcagatggaggaggagtcagccaaaatcaaggacaagtacgag
caggcgaacagcttcctcaagatcatgaacgacctgcaaaccaagaccgagaagctcgag
tacaagaaggatgccatcgtggaactacgcagccgcatcgaagagctccccgatcctgac
gaggtcctgcgcaataccctcgacgagtatgagcagaccatcaaccggatcgtggctgat
cgcgaccacaaggctgcccagttccatgacctgcaggccgagctcaagtcggcacgggat
cagcacactgccaaggccgctgagcagggcaagcaccagtcggacaaggagaagtacgag
cggcagttggtcgcgcgcgagcgcatgatccgtgaagcggctgagcgccatgagatccgc
ggctacaatggcgatctggacgatcgaaggattgctatcttcaacgagcgcattcagaag
atcttgaatgataaaaggcgtgagttagagcgcctgcagcgggagaaccaggaggagttg
gataggaagaccgcggtgatcgcggagcgtgagagccgcaagcagtcagttatccgggat
cgcaaggctgcgaaagatcgcatcatctctcttgggaaggatatggctagcatccaggga
gagttatccagcatagatattgacgaaggcacggaggagatgcttcgcgctgagatgaag
gagctgcaggcacggattgaggcagctaaggctgatgagcaaaatgccaacctagacgca
cagatcaaggaggtcaacgaggagatttggaagttggagtcgctctcggccaagctagct
cgggagttggttgagtgcaccaggttagcgtcggaaagggctcagctggatttgcgcagg
aagcaactagcagagcgtaagagggagctggagatcatgacaaacacgtggaatgagcag
ttttcgactttgctgggagagggctggcgtccagagacccttgagcgcgacttcagtgat
gttcttaagcaacagcagctgctcgtgggtgagcaccggaagaagaaagatgccacacaa
caggaactcaagcaggctgagtaccagctctcgaatgccaggaatctccacaacaagctt
accaacgagatggaggcctgcatgagagctgtccagacggcgatgaaggaagcaagagac
cttgactctgcaccacctgtcgatgagtacatcactatgctggaaaccgacgaaaaagag
ctggctgaggttgagacagcgctcaagttgtacgatgagttaaagaagcactattcgact
atcaaagatagggctctgcgcttcaacaagtgctacatttgcgaccgggacttcaccaac
caagaagcggccaagactaggttgttggagaaggtggccaagcggctcggggatgaagag
aagaaagagttgcttgaagaccaagcagccttcatgaaatctctggatattcttagggca
gtccgtgtcaaatatgatacgtaccagcgcctgagcagcgaactcccacagctgagccgg
gaaatcgactcagagacaaatagacgggaggaccttgtccgccgtttagaggatcaggac
ctggccttccgcgaggccgataacaagctgcaggagatggagacgcttaacaagcatgtc
atgaagattacgcagctgctcaaggatatcagtgatgcggagaagcaggtcgagaggtcg
cagcagttgtcgaatatcgagacgcgcagtgccgacgagatcaacgaggaacagacaaca
tgcgctgagcaaactcgagcggcccaggcgaagctcaccaagctgacagctgagaagcag
cgcctaaaggacctggtccgccagctcgaggtcgagcgcttgcagttggaaaacaagatc
agcagtgccgtccagcagctcgagcggaagaagcggctgcaggagtccatcgcccggcac
aaggaggaccagaaccaagcacgtaacgccgtgcaggaggccgacgaggagctggagcgt
ctggagcctgagattgccggtgcccgggctgcactcgacgaagctcgtcaggcctgccgg
gctaaggagcagaaggtcgctgcagagcgcgatgccatcgcgcaaacggtcagcgagctc
aacatgatcaacagcgagattcaagagtatctcgaccggggcgggccctcaagcctcgca
gccaaccagcgggccattgccaatttggagacccagatggccaacctggagggcgaaatg
cgcgagctgacggtgcagatcaacaagctcaacaaggagatcgacaacagcgacgccaag
aaacgcaacattgccgacaatctgacataccgcaagaacctgcgggaaaaagatgcgctg
gagcgtgagattgccgagcttgaggcacgcaacgcccaggaggattatgaccggctgatc
aaggaggctcactacctcgaagcccaccgcagcaagctcaacgcggaccgcgagcgcctt
atgggcatgatgtcgaccaaagacgaggagttccgccgcctaaatgaagaatacgaactc
gacctgaaggacgccaaagccaagtacaaagaaacgcacatcaaagttgagacaaccaaa
gcagccattgaggacctcggccgcggcatggctgccgtcgaccacgccatcatgcagtac
cacagcaagatgatggagcagatcaaccggacgattgctgagctctggcagagcacatac
cagggcaccgatatcgataccatccagatccggtcagacgtggagagcacgacctcctca
gacagcgggacaagaaggaactataactaccgcgtgtcgatggtcaagggcgatacggaa
atggacatgcgtgggcgatgctcagccggtcagaaagtcctcgccagtatcatcatccgg
cttgcgctggcggagtccttttgcgcgaactgtggtctcatcgcgcttgacgagccgacg
actaacctggatagcgataacatccggagtctggcggagtccttgcacggaattattaag
gcacgccaggcgcaggggaatctgcagctgattgtgattacgcacgacgaggagttcctg
aagtacatgcagtgtagcgatttctgtgacgatttctatcgggtgaagagagatgaaaag
cagaacagtgttattgttagggagagcattacgaggattacggagtag
DBGET
integrated database retrieval system
