Caldalkalibacillus thermarum: HUR95_04045
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Entry
HUR95_04045 CDS
T07471
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
cthu
Caldalkalibacillus thermarum
Brite
KEGG Orthology (KO) [BR:
cthu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthu03021
]
HUR95_04045 (sigB)
Transcription machinery [BR:
cthu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUR95_04045 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
GerE
HTH_23
DUF1492
HTH_37
HTH_3
HTH_28
NirdL-like_HTH
PapB
HTH_31
DUF134
DUF3734
Motif
Other DBs
NCBI-ProteinID:
QZT34556
UniProt:
F5L791
LinkDB
All DBs
Position
787729..788520
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AA seq
263 aa
AA seq
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MTVQSKRHLHNKDDIYRLIEAFQKEPDEEIKTRLVLHFEPLVHSLARKFASNEQVLDDLI
QVGMIGLLSALDRYDTSYGRTFESFAVPTIVGEIKRYIRDKTWSVHVPRRIKELAPKIKQ
AIDDLTTELGRSPQIKEIAQRVEASEEEVLETLEISRSYQALSMDSDFEAGQDGSTVNLL
DMVGETEQGYEQVNRRMLLEKLLPVLSEREQQVIRLTFFEGLSQREAGERLNISQMHVSR
LQRRALHKLRELLKKTDTLTQSS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccagtccaaacgtcatcttcataataaagatgacatttaccggttgattgag
gctttccagaaagagccggacgaagagattaagacccgcctagtgctgcattttgaaccc
cttgtccattcattggcccgcaagtttgccagcaacgagcaagtgcttgatgacttgatt
caagtcggtatgatcggtctattgtcagccttggaccgttatgatacttcatacggacgg
acgtttgaaagttttgctgttcccaccattgtgggagagataaagcgctatatccgggac
aaaacttggagtgttcatgttccgcgacggattaaagagctggcacccaaaattaagcaa
gcgatagatgatttaaccactgaattgggccgttcgccacagattaaagaaattgcccaa
cgggtggaagcgtcggaagaagaagtgttggaaactttggaaatcagccgcagttaccag
gccttgtctatggatagcgattttgaggctggccaggatggcagcacggtgaacctcctt
gatatggtgggtgagacagaacagggctatgaacaggtcaacaggcgcatgttgctggaa
aaattgctgcccgtcttatcggaaagggaacaacaggtcatcaggctgactttttttgag
ggtttaagtcaaagggaggctggggagcggctcaatatatcccaaatgcatgtttcccgt
ttgcaaaggcgagctttgcacaagttaagagagctgttgaaaaaaacagacaccttgact
caaagcagttag
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