Caldalkalibacillus thermarum: HUR95_07210
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Entry
HUR95_07210 CDS
T07471
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cthu
Caldalkalibacillus thermarum
Pathway
cthu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUR95_07210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthu03019
]
HUR95_07210
03009 Ribosome biogenesis [BR:
cthu03009
]
HUR95_07210
Enzymes [BR:
cthu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUR95_07210
Messenger RNA biogenesis [BR:
cthu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUR95_07210
Ribosome biogenesis [BR:
cthu03009
]
Prokaryotic type
rRNA helicases
HUR95_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZT35353
UniProt:
A0A8X8IBR6
LinkDB
All DBs
Position
complement(1429648..1430964)
Genome browser
AA seq
438 aa
AA seq
DB search
MGFEEATPIQAEAIPLALKGQDLIGQAQTGTGKTAAFGIPMIEGIQAHANHIQGLVITPT
RELTIQVAEELNRIGEFKKVKVLPVYGGQDINRQIKALKQYPQVIVGTPGRLLDHLRRKT
LRLAHIRHVVLDEADEMLNMGFIDDITAILEQCPQEKQTLLFSATMPEPIKELALRFMQN
PAEVKIKVKQVTVPLIEQYYLEVQEKQKFDILCRLLDLESPELAIVFGRTKRRVDELSEA
LKRRGYLAEGIHGDLSQARRDQVINLFRTGSIDILVATDVAARGLDIQGVTHVCNFDIPQ
DPENYVHRIGRTGRAGQTGKAITFVVPRELDHLKTIEHLIRRKLEKKRIPTISEVLKGRQ
QAAMERLLRVAEEGDLQVFQRMAQALLEEQDSVTLVAAALKLLTKEPDQTPVRLTAEAPL
QVKKKKYAHGMKRRKHRQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagaagccacacccatccaggccgaagcgatcccattggctttaaaaggt
caagacctgattggccaggcccagaccggtacgggaaaaaccgctgcttttggcatcccc
atgattgaaggtatacaagcccatgccaaccatatacaaggactggtcatcacaccaacc
cgtgaactgacgattcaagtggccgaagaattgaaccggattggtgagtttaaaaaagtg
aaggtgctgcctgtctatggcgggcaggacatcaatcgccaaatcaaagccttaaaacaa
tatccacaggtgattgtagggacacctggacgcttattggaccatttgcgccgcaaaacc
ctgcgtctggctcatatacgccatgtcgtgttggatgaagcagatgagatgctgaacatg
gggtttattgatgacatcaccgctatattggaacaatgcccccaagaaaaacaaacgctg
ctgttttcagccaccatgccggagccgataaaagagctggccctgcgctttatgcagaat
ccagcagaagtaaagataaaggttaagcaagtgaccgtgcctttaatcgagcaatattat
cttgaggtgcaggaaaagcaaaagtttgatatcctctgccgcctccttgatctggagtcc
cctgaattggctattgtgttcgggcgtacaaaacgccgggtggatgaactttctgaggca
ctaaaacgccggggatacttggctgaagggattcacggtgatttgagccaagctagacgg
gaccaggtgattaacctattccggaccggatcaattgatattttggtagccactgatgtg
gctgcccgtggcctggatattcagggtgtgacccatgtctgtaactttgacattccgcag
gaccctgaaaattatgtgcaccggatcggccgcacaggacgggccggacaaaccggaaaa
gcgatcacctttgttgtcccgcgcgaactggaccatttaaaaacaattgagcacctcatt
aggcgcaaactagagaagaagcggattcccactattagtgaagtattaaaaggccggcag
caagcagccatggagagacttttaagggtggcagaagaaggggaccttcaagttttccaa
cgcatggctcaagcgctgcttgaggaacaagattccgtcacattggtggccgcagccttg
aaattattgaccaaagaacctgatcaaaccccggtccggcttacagctgaggctcccctg
caggtgaagaaaaagaaatacgcacacggaatgaaaagacgtaagcaccgccagtaa
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