Caldalkalibacillus thermarum: HUR95_11615
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Entry
HUR95_11615 CDS
T07471
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cthu
Caldalkalibacillus thermarum
Pathway
cthu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUR95_11615 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthu03019
]
HUR95_11615 (pnp)
03016 Transfer RNA biogenesis [BR:
cthu03016
]
HUR95_11615 (pnp)
Enzymes [BR:
cthu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HUR95_11615 (pnp)
Messenger RNA biogenesis [BR:
cthu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUR95_11615 (pnp)
Transfer RNA biogenesis [BR:
cthu03016
]
Prokaryotic type
tRNA degradation factors
HUR95_11615 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SMC_hinge
SPATA25
S1_RRP5
OB_RRP5_4th
DNA_pol_B
Motif
Other DBs
NCBI-ProteinID:
QZT32976
UniProt:
F5L9T6
LinkDB
All DBs
Position
complement(2284295..2286433)
Genome browser
AA seq
712 aa
AA seq
DB search
MSHDDFKVYEMEWAGKPLRFEVGKMAKQANGAVLARYGDTAVLCTVTASKEPKDLDFFPL
TVNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFPDGFRNEVHVISTVLS
VDQDCSPEITAMIGSSLALMISDIPFAGPIAGVNVGRIGDELIINPTWQQLEKSDINLIV
AGTQQGINMVEAGADEVPEEIMLEAMLRGHEEIQKLVNFQLEITKEVGKEKMEVELYEVA
PEIEQAVEAFTKDRLLDVILVKEKKAREEAIQALKDETVQHISESIAEDDEEREKKLKDV
EIVFDSLLKKEVRRLITVEKIRPDGRKSDEIRSISCEVGLLARTHGSGLFTRGQTQALSV
CTLGALGDVQILDGLGVEESKRFMHHYNFPPFSVGEARPPRAPGRREIGHGALGERALEP
VIPSEEEFPYTIRLVSEVLESNGSTSQASICASTLALMDAGVPIKAPVAGIAMGLVKEGD
QITILSDIQGIEDALGDMDFKVAGTKKGVTALQMDIKIDQLSKEILVKALEQARKGRLYI
LDKMLAVIDQPRKELSTYAPKIKTMRISPEKIRDVIGPSGRMINQIIDETGVKIDIEQDG
RLYIASPDVNMIKKAQQMIENIVRDVEVGETYLGKVKRIEKFGAFVEILPGKEGLVHISQ
LAEGRVNRVEDVVKIGDDILVKVTEIDEHGRVNLSRKALLKDQNRKFFSKRN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgacgacttcaaagtctacgaaatggagtgggcaggtaagccgcttcgtttc
gaagtgggcaagatggccaaacaagctaatggtgctgttttggcccgttacggtgacaca
gctgtcttatgtacagtgactgcttcgaaggagccaaaagacctggacttttttccctta
acggtcaattacgaagagcggctctatgcagtggggaaaattccaggtggatttatcaaa
cgggaaggccgtcccagtgaaaaagcggttttggccagccgtttgattgacaggccaatc
cgccccctgtttccagatgggttccgcaacgaagtgcatgtgatcagcacagtgttatct
gttgatcaggattgctcaccagaaattacagcgatgattggctcttccttggctttgatg
atttcagacatcccctttgccggtcctattgctggtgttaatgttggtcggataggtgat
gaattaattatcaacccgacttggcaacagttggaaaagagtgacataaacctgattgtt
gccggtacccagcagggcattaacatggtggaggcaggagcagatgaagtgcctgaagag
atcatgctagaagccatgctaagggggcacgaggaaattcaaaaattggtcaacttccag
cttgaaattacgaaagaagtcggcaaagaaaaaatggaagttgaactgtatgaagttgca
cccgagatcgaacaggctgttgaagccttcaccaaagaccgtctgctggacgttatcctg
gtcaaggagaagaaagcacgggaagaggcgattcaagctctaaaagatgaaactgtacag
cacattagtgaaagtattgctgaagatgatgaagagcgggagaaaaaactgaaggatgtt
gagatcgtatttgactctctgcttaaaaaagaagttcgccgcctgatcacagtggagaag
atcagacccgacggacgtaaaagtgatgagattaggtctatctcctgtgaggttggcttg
ctggcgcgcacgcacggctcgggattatttacccgcggacaaacacaggcactcagcgtc
tgcacactgggcgcgttgggagatgtccagatcttggacggtttaggtgttgaagaatcg
aaacgctttatgcaccattataactttccaccgtttagtgttggggaagctcggccaccg
agagctcctggccgccgggaaatcggtcatggcgcgttaggagagcgagccttggaaccg
gttattccttctgaagaagaatttccatatacgatccgcttagtttctgaagtcttagag
tccaacggttccacttcccaagcaagcatttgtgccagcacgttggctttaatggacgcg
ggtgtaccgattaaagcacctgttgccggtatcgccatgggtctggttaaagaaggcgat
cagattaccattctttcagatattcaaggcattgaagatgccctgggagatatggacttt
aaagtcgctggaaccaaaaaaggtgtcacagctttgcagatggacattaagattgatcaa
ttgtccaaggagatcttggttaaagcgctggagcaggcgcgcaaagggcgcttgtacatt
ttggataaaatgctggctgtaattgatcagcctagaaaagagctgtcaacgtatgcgccg
aaaattaagacaatgcgtatttcaccggagaaaatacgcgatgtcattggaccgagtggc
cgcatgatcaatcaaattattgatgaaacaggagttaagattgatattgagcaggatgga
cgtttatacatcgcttcgccagatgtgaacatgatcaagaaggcacagcaaatgattgaa
aacattgtacgggatgttgaagttggtgagacctaccttggcaaagtgaagcggattgaa
aagtttggtgcctttgtagaaattctgccaggcaaggaagggctggttcacatttcacaa
ctggctgaaggtcgggtcaaccgcgtggaggatgtggttaagattggggatgatatcttg
gtcaaagtgacagaaattgatgaacatggacgtgtcaatctgtctcgcaaagcattgctt
aaagaccaaaaccggaaatttttcagcaaaagaaattga
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