Caldalkalibacillus thermarum: HUR95_14300
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Entry
HUR95_14300 CDS
T07471
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cthu
Caldalkalibacillus thermarum
Pathway
cthu03030
DNA replication
cthu03430
Mismatch repair
cthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUR95_14300 (holA)
03430 Mismatch repair
HUR95_14300 (holA)
03440 Homologous recombination
HUR95_14300 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthu03032
]
HUR95_14300 (holA)
03400 DNA repair and recombination proteins [BR:
cthu03400
]
HUR95_14300 (holA)
Enzymes [BR:
cthu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUR95_14300 (holA)
DNA replication proteins [BR:
cthu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUR95_14300 (holA)
DNA repair and recombination proteins [BR:
cthu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUR95_14300 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DUF5839
AcnX_3rd
Motif
Other DBs
NCBI-ProteinID:
QZT33407
UniProt:
F5L8R3
LinkDB
All DBs
Position
complement(2788757..2789785)
Genome browser
AA seq
342 aa
AA seq
DB search
MNITEANTQIKQGHIAPVYVLYGSQRFLIDEIIRNLSEHILDEASVDFNYETFDLEEHPI
QSVLEAAETLPFMGEKRLIVAYGAHFLSGAKEKYKVEHDLEALMRYVSHPVDYSVLVLVV
PQEKLDERKKIVKLLKKEGAVVQAGSLPMDQLVPWLKQRAADLGVQITDEACALLHQFAG
DHMQMLANEMAKMASYVGKQGVITEETVHQLIAKTVEQDVFNLVDHVVQLRVSQAFATLE
ELLRRNEEPIKILFLLARQFRLIYRAKDLAKQGYSERQMCQMMGVHPYVCKLAVRQGRRF
SLKQLAEVLDQLAELDFKLKTGQLDKRLALELFILQLTKKAI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcacggaggccaacacacaaattaaacagggccatattgcacctgtctatgtt
ctgtacggatcacagcggtttctaatcgatgagatcattcgcaacttaagcgagcatatt
ctggacgaggccagtgtggatttcaattatgagacgttcgacttggaagaacatccaatc
cagagtgtacttgaagcggcggaaacactgcctttcatgggtgaaaaacggttgatcgtt
gcctacggagcccattttttaagcggggcaaaagaaaaatacaaggttgaacatgattta
gaggccttgatgcgctatgtaagccatcccgttgattattctgtattggtgcttgtggtg
ccccaggaaaagctggatgagcgcaaaaagatagtcaaactgctgaagaaagagggggct
gttgtgcaagccggttccctgccaatggatcagcttgttccctggctgaagcaacgtgca
gccgatctgggggtacagataacagatgaagcttgtgcattgttacatcaatttgccggg
gatcacatgcagatgctggccaacgaaatggctaaaatggccagttatgtgggcaaacaa
ggcgtcataacggaggaaacggttcatcaactgattgccaaaacagtggaacaggatgtg
ttcaacctggtggaccatgtggtgcaacttagggtcagccaggcttttgccaccctggag
gagttgcttaggcgaaatgaagaacccattaaaatattgtttctattggcccggcaattc
cgccttatctatcgcgccaaagatttggctaagcaagggtactctgagcgccagatgtgc
cagatgatgggtgtccatccctatgtctgcaaattggcggtaaggcaaggacggcgattt
tcgctgaaacagctcgctgaggtccttgatcaattggccgagctggactttaaactgaaa
acaggccagctggacaaacgcttggctcttgaattgtttattttgcagttaaccaaaaaa
gcaatctaa
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