Caldalkalibacillus thermarum: HUR95_14700
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Entry
HUR95_14700 CDS
T07471
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cthu
Caldalkalibacillus thermarum
Pathway
cthu03410
Base excision repair
cthu03430
Mismatch repair
cthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUR95_14700 (recJ)
03430 Mismatch repair
HUR95_14700 (recJ)
03440 Homologous recombination
HUR95_14700 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthu03400
]
HUR95_14700 (recJ)
DNA repair and recombination proteins [BR:
cthu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HUR95_14700 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUR95_14700 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUR95_14700 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
QZT33478
UniProt:
F5LAR5
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Position
complement(2865075..2867456)
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AA seq
793 aa
AA seq
DB search
MLASQTRWEVASCPLEQARQLQRELGLTSLVAKVLTARGWDAEQARQLLDIDKQTFYDPY
RMDGMAEAVERIKDAVRNNDKIRVYGDYDCDGITSTVIMYKTLSQLGATVDYYVPNRFSE
GYGLNKAAIDKAKAEGVRLLITVDTGITGREEVAYAMAQGIDVIVTDHHQPPPELPQSLA
VINPKKAGCPYPFKDLSGAGIALKVAQALLDDTPQAFLDIAALGTIADLVPLRDENRLIA
YHGLNVLNRTRHVGLQVLIEKAGLGEVSINEQHVGFVLGPRLNSCGRLASAETAVQLFLT
DDRAQASALVQNIEALNAERQRLVEQIVQEAVDMIEGEYPRVKPKALVVAQEGWHEGVLG
IVASKLVERYYRPAVVLTIDSNSGMAKGSARSIDGFDIYQALFSCREWLPHFGGHRQACG
LSLAVEHLPYIRTRLDQLAEQWLTEEDLQPATRVDISCPVSELTVEAIEQLRKLAPFGEG
NPKPVILVEELDIKDLRQVGAAGQHLKCLFQQEDIPLEAIGFGWGEVVHHICPAAKVSLV
GEPAINEWNGERKPQILIADLQVRERQYFDWRSKNRLAEQINLLPADKTVAVCYFREAQP
EGPLEGVLHISIGQDGQVGQPDLLDRSDAVVLYDLPRTRQQLHRLCRQLKDVGRIYMMFR
HDDSHFFSTLPTREHFKWYYAFLRQKGPFDLQAWGPELARRKGWTMDALQFMTEVFLELQ
FATIKEGKIHLVPSPGKKDLTESACYRKRQEEIQLEQLLVYSPYQELIRYLSHHIDGHEA
NLDRGKEEKVYGF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctggcttcgcaaacgagatgggaggttgcctcttgccctctggagcaggccaggcaa
cttcaaagggaattgggactcacctccctagtggctaaagtgttgaccgccagaggatgg
gacgcggaacaggcacgtcagttattggatattgacaagcaaaccttttatgacccctac
cggatggacggcatggcggaggcggtggaacgcattaaggacgctgtgcgaaacaatgat
aaaatccgtgtctatggggactatgactgcgacggcatcaccagcacggtgatcatgtat
aagactttgtcccagctcggggctacagtggattattatgttcccaaccggttcagtgaa
ggctacggtcttaacaaagctgcaattgacaaagctaaagcggagggtgtccggctcctg
atcacagtggataccggcatcaccggccgggaggaagtggcatatgcaatggcacagggc
atcgacgtgatcgtcacggatcaccatcagcctcctcctgaactcccccaaagtttggct
gtcatcaatcctaaaaaagcaggttgcccttatccgttcaaagacttgtccggagccggc
attgcccttaaagtggctcaagctttgctggatgataccccccaggccttcctggatatt
gcggcccttggcaccattgccgatctggtccccttaagggatgaaaaccgcctgattgcc
tatcacgggctaaatgtgctcaaccgcacccggcacgttgggctgcaagtgctaatcgaa
aaggcagggttgggtgaagtgtccatcaatgaacagcatgtgggctttgtgcttggtccc
aggcttaattcgtgcggccggctcgcctcagctgagacggccgttcaactttttctaacg
gacgaccgcgctcaagcgtcagccctcgtgcagaacattgaggcgttgaatgccgaacgc
cagcgtttggttgagcagattgtacaggaagctgtggacatgattgaaggggaatatccc
cgcgtcaaacctaaagcgttggttgtggctcaggaaggctggcatgaaggggtgctgggg
attgtcgcctccaaacttgtggagcgttattacagaccggccgtcgttttgaccattgat
tcaaacagcggcatggccaagggatctgcccgcagtattgatggctttgatatttatcag
gctttattctcttgccgagagtggttgccccattttggagggcaccggcaggcttgcggc
ttaagtctagccgttgaacatcttccatacatacgcacccgtctggatcaattggccgaa
caatggttaacggaagaagatttgcagccagcgacccgtgttgacatttcttgcccggtg
agtgaattgactgtggaggccatcgaacagctgcgcaagctggcccccttcggggaaggc
aatcccaagccggtgatcctggtggaagagctggacattaaagatctgcgccaggtcggt
gcagctggccagcacttaaaatgtttgttccagcaggaagacatcccgttagaggccatt
ggctttggttggggagaagttgtgcatcacatctgcccggcagctaaggtcagccttgtc
ggggagccggccataaatgagtggaatggagagcgcaagccacaaatcttgattgctgat
cttcaagttcgcgaacggcagtattttgactggagaagcaaaaacaggctggctgaacag
atcaaccttttgccggctgacaagacagtggcggtgtgttatttccgggaagcacagcca
gaaggcccccttgaaggtgtattgcatatttccattggtcaagacggccaggttggacag
cctgaccttctggaccgttcggacgcggtggtcttgtatgacctgccccgtacccggcag
caactgcaccgcttgtgccgccagctcaaagatgtggggcggatttatatgatgtttcgc
catgatgacagccattttttctccaccctgcccacacgggagcattttaaatggtattac
gccttcttgcgccagaagggcccttttgatctgcaagcctgggggccagagctggccaga
cgcaaagggtggaccatggatgccttgcaatttatgacagaggtgtttttggaactgcaa
tttgctacaataaaggaaggcaaaatacaccttgttcccagtcccgggaagaaagattta
actgagtcggcctgttatcggaaaagacaggaagaaatccagctggaacaattgcttgtt
tattcaccgtaccaggaacttatccgctacttatcccaccacattgacggtcacgaggcc
aatttggacagaggtaaggaggaaaaagtatatggattttaa
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