Cupriavidus taiwanensis: RALTA_A0811
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Entry
RALTA_A0811 CDS
T00702
Symbol
dnaE1
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03030
DNA replication
cti03430
Mismatch repair
cti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RALTA_A0811 (dnaE1)
03430 Mismatch repair
RALTA_A0811 (dnaE1)
03440 Homologous recombination
RALTA_A0811 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cti03032
]
RALTA_A0811 (dnaE1)
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A0811 (dnaE1)
Enzymes [BR:
cti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RALTA_A0811 (dnaE1)
DNA replication proteins [BR:
cti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RALTA_A0811 (dnaE1)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RALTA_A0811 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CAQ68783
UniProt:
B3R3A2
LinkDB
All DBs
Position
1:841073..844585
Genome browser
AA seq
1170 aa
AA seq
DB search
MSAPRFVHLRLHSEYSIVDGIVRLDDAVKAAAADGMGALALTDLANAFGLIRYYKEARGK
GVKPVVGADVWLTNAEDRDKPARLLLLVQDRRGYLNLCMLLSRAWLGNQHRGRAEIDPAW
FQEPGEDDLPLATGLIALSGAMGGDIGMALANGNADGARRAAQHWAAVFPQRFYIELQRA
GHAGTDAYVQQAVQLAASLQLPVVATHPVQFMTPDDYTAHEARVCIAEGELLANPRRTRR
FTTDQYFKTQDEMCALFADIPSALENAVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VFMAKEGLEKRLAVLFPDEAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVITYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVT
IEEAKKEEPLLTERERNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGGQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWNCSH
IPLDDGPAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KPEEMAQHRVMFREGADKNGLSAQQADDIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAEFMAANMSLAMDDTDKVKILYEDCKLNKIAVLPPDVNASEYRFAPTDPKTIRYGL
GGIKGSGQGAIEDILRAREERPFTDLFDFCERVDRRQVNRRTIEALIRAGAFDSLNDNRA
QLLASVPIAMEAAEQKAESANQVSLFDLMGDAGDAHRPELLDEPRWSPKRTLQEEKQALG
YYFSGHLFDAYRDEVRRFNKGTLAGLEKEVQGNGGGFGRDVRGKTIAGVISGMRTQMTQR
GKMLIVTLDDGTGLVEMTVFNEVFDANRQMFREDELLIATGNARHDTFTGGVRFTAESVM
DLVAARVRFASAVRLSMNGNSSTGMLRELLMPHLARASGMQGLPVRIRYEAKAASCEAML
GPEWQVVPSDEALTALRQVLSADAVSTVYE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccccgcttcgtacacctccgcctgcattccgaatactccatcgtggacggc
attgtccgcctcgatgatgccgtcaaggccgccgccgccgatggcatgggcgcgctcgcc
ctgacggacctagccaacgccttcggcctgatccgctactacaaggaagcgcgcggcaag
ggcgtgaagccggtggtcggcgccgatgtgtggctgaccaacgccgaggaccgcgacaag
cccgcgcgcctgctgctgctggtgcaggaccggcgcggctacctgaacctgtgcatgctg
ctgtcgcgcgcgtggctgggcaaccagcatcgcggccgcgccgagatcgacccggcctgg
ttccaggaaccgggcgaggacgacctgccgctggccaccggcctgatcgcgctgtcgggc
gcgatgggcggcgacatcggcatggcgctggccaacggcaatgccgacggcgcgcgccgt
gccgcgcagcactgggccgcggtgtttccgcagcgcttctacatcgagctgcagcgtgcc
ggccacgccggcaccgacgcctacgtgcagcaggcggtgcaactggcggcgtcgctgcag
ttgccggtggtggcgacgcatccggtgcagttcatgacgccggacgactacaccgcgcat
gaagcccgcgtgtgcatcgccgagggcgagctgctggccaacccgcgccgcacccggcgc
ttcaccaccgaccagtacttcaagacccaggacgagatgtgcgcgctgttcgcggacatc
ccctcggcgctcgagaacgcggtggagatcgcgcgccgctgcaacctgacgctggagctg
ggcaagccgcgcctgcccctgttcccgacgccggacggcatgtcgctcgacgactacctg
gtgttcatggccaaggaaggcctggagaagcgcctcgcggtgctgttcccggacgaggcg
gtgcgcgaagcgaagcgccccgaatactacgcccggctggagttcgagaccggcaccatc
atcaagatgggcttccccggctacttcctgatcgtggccgactttatcaactgggccaag
aacaacggcgtgccggtgggcccggggcgcggctcgggtgcgggctcgctggtcgcctat
gcgctgggcattaccgacctcgacccgctcaagtacgcgctgctgttcgagcgtttcctg
aacccggaacgggtctcgatgcccgacttcgacatcgacttctgccagcacggccgcgat
cgcgtgatcacctacgtgaaggagaagtacggcaaggatgcggtgtcgcagatcgccacc
ttcggcaccatggccgccaaggccgcggtgcgcgacgtggggcgcgtgctcgacctcggc
tacggcttcgtcgacggcatcgccaagctgatcccgttcaagccgggcaagctggtcacc
atcgaggaagcgaagaaagaagagccgctgctgaccgagcgcgagcgcaacgaggaagaa
gtgcgccagctgctggagctggcgcagcgcgtcgagggcatgacgcgtaacgtcggcatg
catgccggcggcgtgctgatcgcgcccggcaagctgaccgacttctgcccgctgtacacg
cagggcgggcagaacgacggcatgagcggcgtggtcagccagtacgacaaggacgacgtc
gaggccgccggcctggtcaagttcgacttcctgggcctgaccacgctgaccatcctggac
tgggccgagcgctatatccgccgcctggacccgagcaaggccgactggaactgcagccat
atcccgctcgacgacggccctgccttcgacatcctcaagaccgccaacacggtcgccgtg
ttccagctggaaagccgcggcatgcagggcatgctgaaggatgccaagcctgaccgcttc
gaggacatcatcgcgctggtggcgctgtaccgcccgggtccgatggacctgatccccagc
ttctgcgcgcgcaagcacggccgcgagaaggtggagtatcccgatccgcgcgtcgaaccc
gtcctgaaagagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgctcggcggcgccgacctgctgcgccgcgcgatgggcaagaag
aagcccgaggaaatggcgcagcaccgcgtcatgttccgcgagggcgccgacaagaacggg
ctgtccgcgcagcaggccgacgacatcttcgacctgatggaaaagttcgcgggctacggc
ttcaacaagtcgcacgcggccgcttatgcgctgctggcgtactacaccgcctggctcaag
gcccaccatccggccgaattcatggcagccaacatgtcgctggccatggacgacaccgac
aaggtcaagatcctctacgaggactgcaagctcaacaagatcgcggtgctgccgcccgac
gtcaacgccagcgagtaccgcttcgcgccgacggacccgaagaccatccgctacggcctg
ggcggcatcaagggcagcggccagggcgcgatcgaagacatcctgcgcgcgcgcgaggag
cggccgttcaccgacctgttcgatttctgcgagcgcgtcgaccgccgtcaggtcaaccgc
cgcaccatcgaggcgctgatccgcgccggcgccttcgacagcctcaacgacaaccgcgcg
cagctgctcgcgtcggtgccgatcgcgatggaagccgccgagcagaaggcggagtcggcc
aaccaggtgtcgctgttcgacctgatgggcgatgccggcgatgcgcatcgccctgagttg
ctcgacgagccgcgctggagccccaagcgcacgctgcaggaagaaaaacaggcgctcggc
tactacttctcgggccacctgttcgacgcctaccgcgacgaggtgcgccgcttcaacaag
ggcacgctggccgggctggaaaaggaagtgcagggcaacggcggcggcttcggccgcgac
gtgcgcggcaagaccattgccggcgtgatcagcggcatgcgcacgcagatgacccagcgc
ggcaagatgctgatcgtcacgctcgacgacggcaccggcctggtcgagatgaccgtgttc
aacgaggtcttcgacgccaaccggcagatgttccgcgaggacgaactgctgatcgccacc
ggcaatgcgcgccacgataccttcacgggcggggttcgctttaccgccgaatcggtgatg
gacctggtcgccgcgcgggtgcgctttgccagcgcggtgcggctgtcgatgaacggcaat
tcctcgaccggcatgctgcgcgagctgctgatgcctcacctggcgcgcgccagcggcatg
caggggctgccggtgcggatccgctacgaggcgaaggcggccagctgcgaagccatgctc
ggccccgagtggcaggtggtgccttccgacgaggcgctgaccgcgctgcgccaggtgctg
tcagcggatgccgtcagcacagtctacgaataa
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