Cupriavidus taiwanensis: RALTA_A1151
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Entry
RALTA_A1151 CDS
T00702
Symbol
recJ
Name
(GenBank) ssDNA exonuclease, 5'--> 3'-specific, Mg-dependent
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03410
Base excision repair
cti03430
Mismatch repair
cti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RALTA_A1151 (recJ)
03430 Mismatch repair
RALTA_A1151 (recJ)
03440 Homologous recombination
RALTA_A1151 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A1151 (recJ)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RALTA_A1151 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RALTA_A1151 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RALTA_A1151 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAQ69115
UniProt:
B3R482
LinkDB
All DBs
Position
1:complement(1179614..1181317)
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AA seq
567 aa
AA seq
DB search
MTRIAIRQYSPEHASALAATGLHPTLARILAARGVARAAELATDLPELVPPAAMKGIGHA
AAYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAAKQNPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGAELPQAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRRRGVYTQQTQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDANRAWEIAQELDSMNRERRDIEAGMQQEALRILEQPMAGLAGADASRFTVSV
FNDTWHQGVIGIVASRLKDKFHRPTITFAPGDDTTVKGSGRSIPGFHLRDALDLVSKRHP
GMLLKFGGHAMAAGLTVRAERFAEFQEAFEAVGREWLTDDQLARVIETDGDIEDQCFSPE
FVSLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRFDAIWFNHADSLGA
SAQVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgccatccgccagtattcccccgaacacgccagcgcgctggccgccacc
ggcctgcacccgacgctggcgcgcatcctggccgcgcgcggcgtggcccgcgccgccgag
ctggccaccgacctgcccgaactggtgccgcccgcggccatgaaagggatcggccacgcc
gcggcttacctggcggatgccatcgccgccggcaagcgcctgctgatcgtcgccgactat
gactgcgacggcgccaccgcctgcgcggtcggcgtgcgcggcctgcgcatgctgggcgcg
cgggtcgagtacatcgtgcccaaccgcttcgagtacggctatggcctgacgccggagatc
gtcgcgctggcggcgaagcagaatccggacgtgatcgtcaccgtcgacaacggcatcgcc
agcgtcgacggcgtcgccgcggccaatgcgctgggcatcgacgtggtagtgaccgaccac
cacctgccaggcgcggaactgccgcaggccgcggtgatcgtcaacccgaaccagccgggc
tgcgaattccccagcaagaacctggcgggcgtgggcgtgatgttctacgtgctgctggcg
ctgcgggccgagctgcgccgccgcggcgtctacacccagcagacccagccgccgctgcag
acgctgctggacctggtggcgctgggcaccgtggccgacgtggtcaagctggacaccaac
aaccgcatcctggtggcacagggcctgcgccgcatgcgcgccggacgcatgcagcccggc
gtcgccgcgctgttccgcgccgccggccgcgaggccgcgcgcgccaataccttcgacctg
ggctttggcctgggcccgcgcctgaatgcggccggccggctggccgacatgtcgctgggc
atcgagtgcctgctgaccgacgatgccaaccgcgcctgggaaatcgcccaggagctggac
agcatgaaccgcgagcggcgcgacatcgaggccggcatgcagcaggaagcgctgcgcatc
ctcgagcagcccatggccggactggccggcgcggacgcctcgcgctttaccgtcagcgtg
ttcaacgatacctggcaccagggcgtgatcggcatcgtggcgtcgcggctgaaggacaag
ttccaccgccccaccatcacctttgcgccgggcgacgacaccaccgtcaagggctcgggc
cgctcgatccccggcttccacctgcgcgacgcgctcgacctggtgtccaagcgccacccc
ggcatgctgctcaagttcggcggccacgccatggcggcggggctgaccgtgcgcgccgaa
cgctttgccgaattccaggaagccttcgaggcggtcgggcgcgaatggctgaccgacgac
cagctggcgcgcgtgatcgagaccgacggcgatatcgaggaccagtgcttcagccccgag
ttcgtcagcctgctggaacagcaggtgtggggccagggcttcccggcgccgaccttctgc
ggcgagttcgacgtgctgcgccaaagcgtgctcaagggcaagcacctgaagcttcagctg
gggcgcggcagccagcgcttcgacgcgatctggttcaaccatgccgactcgctcggcgcc
agcgcgcaggtggcctaccggctcgacaacaacaccttcaacggcgtcacccgcgtgcag
ctggtgatcgagcacgcgcagtaa
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