Cupriavidus taiwanensis: RALTA_A1287
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Entry
RALTA_A1287 CDS
T00702
Symbol
xthA
Name
(GenBank) EXODEOXYRIBONUCLEASE III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RALTA_A1287 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A1287 (xthA)
Enzymes [BR:
cti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RALTA_A1287 (xthA)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RALTA_A1287 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAQ69247
UniProt:
B3R4L4
LinkDB
All DBs
Position
1:complement(1322840..1323670)
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AA seq
276 aa
AA seq
DB search
MSATGLPGQGPLRIASWNVNSLKVRLPQVLQWLAEQEQAGAPIDALCLQELKLPDDKYPL
AELENAGFHSIYTGQKTYNGVAILARDASMPGPVDVVRNIPGFEDAQQRVIAATYGDLRL
VCAYFPNGQSLDSDKFAYKLQWLEAMTAWLREEMARHPRLALLGDFNIAPEDRDVHDPAK
WEGQNLVSPPERAAFAALLELGLADAFRKFEQPEKAFSWWDYRMLAFRRNAGLRIDHILL
SPALAEQCTACVIDRVPRTWEQPSDHTPVVATLHCA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacgggactgccgggccagggcccgctgcgcattgccagctggaacgtcaac
tcgctgaaggtgcgactgccgcaggtgctgcagtggctggccgagcaagagcaggccggc
gcgccgatcgacgcgctgtgcctgcaggaactgaagctgcccgacgacaagtacccgctg
gccgaactggaaaatgccggtttccacagcatctacaccggccagaagacgtacaacggc
gtcgccatcctggcgcgcgacgcgagcatgcccggtcccgtcgacgtggtgcgcaacatc
cccggcttcgaggacgcgcagcagcgcgtaatcgccgcgacgtatggcgacctgcgcctg
gtctgcgcctacttccccaacgggcagtcgctcgactcggacaagttcgcctacaagctg
caatggctggaagcgatgaccgcgtggctgcgcgaggaaatggcgcgccacccgcggctg
gcgctgctgggcgacttcaatatcgcgccggaagaccgcgacgtgcacgatccggccaag
tgggaaggccagaacctggtctcgccgccggagcgcgccgcctttgccgcgctgctcgaa
ctgggcctggccgatgcgttccgcaagttcgaacagccggagaaggcgttctcgtggtgg
gactaccgcatgctggcgttccggcgcaatgccgggctgcgcatcgaccatatcctgctg
tcgccggcgctggcggagcagtgcaccgcctgcgtgatcgaccgggtgccgcgcacgtgg
gagcagccatccgaccacacgccggtggtcgcgacgctgcactgcgcctga
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