Cupriavidus taiwanensis: RALTA_A2208
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Entry
RALTA_A2208 CDS
T00702
Symbol
rhlE2
Name
(GenBank) DEAD box ATP-dependent RNA helicase with P-loop hydrolase domain
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RALTA_A2208 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cti03019
]
RALTA_A2208 (rhlE2)
Enzymes [BR:
cti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RALTA_A2208 (rhlE2)
Messenger RNA biogenesis [BR:
cti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RALTA_A2208 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
AAA_22
HEM4
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CAQ70143
UniProt:
B3R5B9
LinkDB
All DBs
Position
1:complement(2338396..2339931)
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AA seq
511 aa
AA seq
DB search
MCRVRLPPIPIPMTTTNAPEPTTAVPTAVQTFDSFGLDARILRALSEQGYTSPTPIQAQA
IPVVLLGKDVMGAAQTGTGKTAGFALPIIQRLLPLANASASPARHPVRALMLTPTRELAD
QVYDNVARYAKHTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQQKSVNLSQ
VQMLVLDEADRMLDMGFLPDLQRIINLLPAQRQTLLFSATFSPEIKRLASSYLKQPVTIE
VARSNSTNENVRQAVYQVEDGHKQAAVVHLLKQRAEQSQSRQCIVFVNSKIGCSRLARHL
EREGINAAAIHGDKTQTERMQTLDGFKSGTIDALVATDVAARGLDIPDMPCVINFDLPYS
AEDYVHRIGRTGRAGASGDALSIYVPGNDERLLSDIEKLIKRSIPRGKLEGFDPTGERAR
QADSERRRERNDLRRARGADSEDRPRRHDHGASRQAFRASDDPFFSRPYEPSPSSAAQAK
AADEVAAALTRGRQAPKRPVAALLGGVPRKS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccgggttcgcctcccgccaataccgatacccatgaccactacgaacgcaccagaa
cctaccaccgcggttccgaccgccgtgcagaccttcgacagctttggcctggacgcgcgc
atcctgcgggccttgtccgagcagggctatacctctcccacgccgatccaggcgcaggcc
attccggtcgtgctgctgggcaaggacgtgatgggcgccgcgcagaccggcaccggcaag
accgcgggcttcgcgctgccgatcatccagcgcctgctgccgctggccaatgccagcgcc
tctccggcacgccacccggtgcgcgcgctgatgctgaccccgacgcgcgagctggccgac
caggtctacgacaacgttgcccgctacgccaagcacaccgacctgcgcagcaccgtggtg
ttcggcggcgtcgacatgaacccgcagaccgacgcgctgcgccgcggcgtcgagatcctg
gtggccacgcccggccgcctgctcgaccacgtgcagcagaagtcggtgaacctgtcgcag
gtgcagatgctggtgctggacgaagccgaccgcatgctcgacatgggcttcctgccggac
ctgcagcgcatcatcaacctgctgccggcgcagcgccagacgctgctgttctcggcgacg
ttctcgcccgagatcaagcgcctggcttccagctacctgaagcagccggtcaccatcgaa
gtggcgcgcagcaactcgaccaacgagaacgtgcgccaggcggtgtaccaggtcgaggac
ggccacaagcaggcggcggtggtgcacctgctcaagcagcgcgccgagcaatcgcagtcg
cgccagtgcatcgtcttcgtcaacagcaagatcggctgctcgcggctggcgcgccacctg
gagcgcgagggcatcaacgccgccgcgatccacggcgacaagacccagaccgagcgcatg
cagacgctggacggcttcaagagcggcaccatcgatgcgctggtcgccaccgacgtggcc
gcgcgcgggctcgacatccccgacatgccgtgcgtgatcaacttcgacctgccgtacagc
gccgaagactacgtgcaccgcatcggccgtaccggccgcgcgggcgccagcggcgacgcg
ctgtcgatctacgtgcccggcaatgacgagcgcctgctgtccgatatcgaaaagctgatc
aagcgcagcatcccgcgcggcaagctggagggcttcgaccccaccggtgagcgcgcccgc
caggccgacagcgagcgccgccgcgagcgcaacgacctgcgccgcgcgcgcggcgccgat
agcgaagaccgtccgcgccgccacgaccacggtgccagccgccaggccttccgcgcttcg
gacgacccgttcttctcgcgcccgtatgagccgagcccctcgagcgcggcgcaggccaag
gccgccgacgaagtcgccgcggcgctcacgcgcggacgccaggcgcccaagcggccggtg
gcggccctgctgggcggggtgccgcgcaagtcctga
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