Cupriavidus taiwanensis: RALTA_A2244
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Entry
RALTA_A2244 CDS
T00702
Symbol
polA
Name
(GenBank) DNA polymerase A; 5'->3' exonuclease; 3'->5' polymerase; 3'->5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03030
DNA replication
cti03410
Base excision repair
cti03420
Nucleotide excision repair
cti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RALTA_A2244 (polA)
03410 Base excision repair
RALTA_A2244 (polA)
03420 Nucleotide excision repair
RALTA_A2244 (polA)
03440 Homologous recombination
RALTA_A2244 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cti03032
]
RALTA_A2244 (polA)
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A2244 (polA)
Enzymes [BR:
cti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RALTA_A2244 (polA)
DNA replication proteins [BR:
cti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RALTA_A2244 (polA)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RALTA_A2244 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RALTA_A2244 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAQ70178
UniProt:
B3R5F3
LinkDB
All DBs
Position
1:complement(2375147..2377966)
Genome browser
AA seq
939 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDDLYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVVVDGVEADDVIGTL
SRQAMEQGVRTVVSTGDKDLAQLVNEHVTLVNTMSGEVLDPPGVLAKFGVPPERIIDYLS
LIGDAVDNVPGVPKVGPKTAVKWLAEHGSLDGVMAAASGIKGVVGENLRNTLEWLPMARR
LVTVKTDCDLSKSVADFHALRETGEDKEQLVAFFQRYGFKTWLREATGESLPDARAQARA
RAATSAPAQGGLFDAPAPSAGDGAPPADDAAPTEIRYETVTTPGMLEDWLRRIESAPLVA
IDTETTSLDPMQAQLVGISLSAAPGEACYIPVAHRGPDVAGLPEHGQLSREFVLERMRAW
LEDASRPKLGQNLKYDIHVFANHGIKLRGVAHDTMLQSYVLASHRNHGMDSLAERLLSLK
TITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRRMFPQVEAAAGLRRVYEEI
EMPVSVVLQKVERNGVLIDAERLAAQSAELGQRMLALEQSAYEAAGQPFNLGSPKQIGEI
LFNQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLSKLKSTYTDKLPKMVN
PRTGRVHTSYGQATAVTGRLASTEPNLQNIPVRTDEGRRIREAFIAEPGSVIVSADYSQI
ELRIMAHISGDENLLRAFANGEDIHRATAAEIFGVERDAVSSEQRRYAKVINFGLIYGMS
AFGLASNLGIERDAARHYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDIN
GGSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWLERDGLQTRQIMQVHDELVLEVP
EHELELVKARLPELMCTVAELRVPLVAEVGSGANWEEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatggatcgagctatctgtatcgcgct
tatcacgctttgccggacctgaggaatggggagggtctgcccacaggggcaatctacggc
atgatcaacatgctgcgcaagttgcgcaacgactacccggcagagtatagcgcttgcgtg
ttcgacgccaagggcaagaccttccgcgacgacctgtacccggcctacaaggaacaccgc
ccgtcgatgcccgaggacctggcgcgccagatcgagccgatccacgaggccgtgcgcgcg
ctgggctggccgatcgtggtggtcgacggcgtcgaggccgacgacgtgatcggcacattg
tcgcgccaggccatggagcagggcgtgcgcacggtggtgtccaccggcgacaaggacctg
gcgcagctggtcaacgagcacgtcacgctggtcaataccatgagcggcgaagtgctcgat
cctccgggcgtgctggccaagttcggcgtgccgcccgaacgcatcatcgactatctgtcg
ctgatcggcgatgccgtcgacaatgtgccgggcgtgcccaaggtcggccccaagaccgcg
gtcaaatggctggccgagcatggctcgctcgacggcgtgatggcggccgcttccggcatc
aagggcgtggtgggcgagaacctgcgcaacacgctggaatggctgccgatggcgcgccgg
ctggtaacggtcaagaccgactgcgacctgagcaagtcggtcgccgatttccacgcgctg
cgcgagaccggcgaggacaaggagcagctggtggcgtttttccagcgctatggcttcaag
acctggctgcgcgaagccaccggcgaaagcctgcccgacgcgcgcgcccaggcccgcgcc
cgtgccgcgacgagcgcgcccgcgcagggcggactgttcgatgcgcctgcgccgtcggcc
ggcgacggtgcgccgccggccgatgacgcggcgcccaccgagatccgctacgagaccgtc
accaccccgggcatgctggaagactggctgcggcgcatcgaatccgcgccgctggtggcg
atcgataccgagaccacctcgctcgatccgatgcaggcgcagctggtcggcatctcgctg
tcggcggcgccgggcgaggcctgctatatcccggtggcgcaccgcggccccgacgtggcc
ggcctgcccgagcacggccagctgtcgcgcgagttcgtgctggaacgcatgcgcgcctgg
ctggaagatgccagccggcccaagctcggccagaacctgaaatacgacatccatgtattc
gccaaccacggcatcaagctgcgcggcgtggcgcacgacaccatgctgcagagctacgtg
ctggcctcgcaccgcaaccacggcatggacagcctggccgagcgcctgctgagcctgaag
acgatcacctatgaagaggtctgcggcaagggcgccagccagatcggcttcgaccagatc
gacctggcccgcgccaccgaatacgccgccgaggatgccgacgtgacgctgcgcctgcat
cgcaggatgttcccgcaggtcgaggccgcggcggggctgcgccgcgtctacgaagagatc
gagatgccggtctcggtggtgctgcagaaggtcgagcgcaacggcgtgctgatcgacgcc
gaacggctggccgcgcagagcgccgagctgggccagcgcatgctggcgctggagcagtcg
gcctacgaggccgccggccagccgttcaacctggggtcgcccaagcagatcggcgagatc
ctgttcaaccagatgaagctgccggtggtgaagaagaccgcgagcggcgcaccgtcgacc
gacgaagaggtgctgcagaagctggccgaggactacccgctgcccaagctgctgctggat
taccgcggcctgtccaagctcaagtccacctataccgacaagctgccaaagatggtcaac
ccgcgcaccgggcgcgtgcacaccagctacggccaggccaccgcggtgaccgggcggctg
gcgtcgaccgagcccaacctgcagaacatcccggtgcgcaccgacgaaggccgccgcatc
cgcgaggcctttatcgccgagccgggcagcgtgatcgtgtcggctgactattcgcagatc
gagctgcgcatcatggcccatatctcgggcgacgagaacctgctgcgcgcctttgccaac
ggcgaggacatccaccgcgccaccgccgccgaaatcttcggcgtcgagcgcgacgccgtc
agcagcgagcagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatgagc
gcgttcgggctggccagcaacctgggcatcgagcgcgacgccgccaggcactatatcgac
cgctacttcatgcgctaccccggcgtggcccactacatggaagagacgcgccagaccgcg
cgcgagcagggctatgtcgagaccgtgttcggccgccggctgtggctgccggatatcaac
ggcggcagcggcccgcgccgccaggccgccgagcgcgccgccatcaatgcgccgatgcag
ggcaccgcggccgacctgatcaagctgtcgatgatcgcggtgcaggactggctggagcgc
gacggcctgcagacgcgccagatcatgcaggtacacgatgaactggtgctggaagtgccc
gagcacgagctggagctggtcaaggcgcgcctgccggaactgatgtgcacggtggccgag
ttgcgcgtgccgctggtggccgaagtgggcagcggcgccaactgggaagaagcgcactga
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