Cupriavidus taiwanensis: RALTA_A2956
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Entry
RALTA_A2956 CDS
T00702
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RALTA_A2956 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cti03019
]
RALTA_A2956 (recQ)
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A2956 (recQ)
Enzymes [BR:
cti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RALTA_A2956 (recQ)
Messenger RNA biogenesis [BR:
cti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RALTA_A2956 (recQ)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RALTA_A2956 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAQ70879
UniProt:
B3R7T4
LinkDB
All DBs
Position
1:complement(3117126..3118973)
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AA seq
615 aa
AA seq
DB search
MSQALAILKDVFGYHAFRGRQAEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGD
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLTGAEASAVERDLLAGRIEILYVAPER
LMTPRFLDLLERTRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPYVPRIALTATAD
ALTRDEIVERLALHDARIFISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSG
IVYCLSRKKVEDTAQWLSGQGINALAYHAGMDAQVRQHHQARFREEEGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADE
AFKRVSSSKLDALLGLCETAGCRRQRILAYFNEASEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDVLRGNASEKIKQWGHDKVSTFGIGKDRSVHEWHTVFRQ
LIAQGLLMIDHGGHGALLLGERAREVLKGERQIILRRQAARPGKSGERAARGTRIDHTAD
MDADTLANWEALRRWRTEAAREHGVPAYVIFHDATLAELARTAPDSLSAMQGIPGIGASK
LERYGQSILAALRTV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcactggcgatcctcaaggatgtcttcggctaccacgccttccgcgggcgc
caggccgagatcatcgatcacgtcgcgaccggcggcgactgcctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagatcccggcgctgctgcgccagcgcgccggcgat
ggcgtgggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggtcgcggcgctg
accgaggccggcgtgcgcgccgcggtgctcaactcgacgctgaccggcgccgaggcctcg
gcggtcgagcgcgacctgctggccgggcgcatcgagatcctctacgtggcgccggaacgg
ctgatgacgccgcgcttccttgacctgctggagcgcacccgcgtcggcctgttcgccatc
gacgaagcccactgcgtgtcgcaatggggccatgactttcggcccgagtacatccagctg
tcggtgctgcacgagcgcttcccgtacgtgccgcgcatcgcgctgaccgcgaccgccgac
gcgctgacgcgcgacgagatcgtcgagcggctggcactgcacgatgcgcgcatcttcatc
tccagcttcgaccggcccaacatccgctaccgcatcgtcgagaaggacaatgcgcgccag
cagctgctggcctttatcaaggccgaacataccgcggccgacggcacccacgacagcggc
attgtctattgcctgtcgcgcaagaaggtcgaggacaccgcgcagtggctgagcggccag
ggcatcaacgcgctcgcctaccatgccggcatggacgcccaggtgcggcagcaccaccag
gcgcgcttccgcgaagaggagggtctggtgatggtggcgacgatcgccttcggcatgggc
atcgacaagcccgacgtgcgctttgtcgcccacctggacctgcccaagagcatggagggc
tattaccaggaaaccggccgcgccggccgcgacgggctgcccgccaatgcctggatggcc
tacggcctgggcgacgtggtgcagcagaagcgcatgatcgacgaatccgaggcggacgag
gccttcaagcgcgtgtcgtcgtccaagctcgatgcgctgctgggtttgtgcgaaaccgcc
ggctgccggcgccagcgcatcctcgcgtacttcaatgaagccagcgagccctgcggcaac
tgcgatacctgcctggagccgccggccacctgggacggcacgcgcgaggcgcagatggcg
ctgtcgtgcgtgtaccgcaccgcgcaggccagccgcgttcacttcggcgcgacccatctg
atcgacgtgctgcgcggcaatgcctcggagaagatcaagcaatggggccatgacaaggtc
tcgaccttcggcatcggcaaggaccgttcggtgcatgagtggcacaccgttttccgccag
ttgatcgcccagggtttgctgatgatcgaccacggcggccacggcgcgctgctgctgggt
gaacgcgcgcgtgaggtgctcaagggcgagcgccagatcatcctgcggcgccaggctgcc
aggccgggcaagtccggcgagcgcgcggcacgcggcacgcgcatcgaccataccgccgac
atggacgccgatacgctggccaactgggaggcgctgcgtcgctggcgcaccgaggccgcg
cgcgagcatggcgtgccggcctatgtcatctttcacgacgccaccctggcggaactggcc
cggaccgcgccggactcgctgtccgccatgcagggcatccccggcattggcgcttccaag
ctggagcgctacgggcagtcgatcctggcagcgctgcgcacggtctga
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