Cupriavidus taiwanensis: RALTA_A3140
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Entry
RALTA_A3140 CDS
T00702
Symbol
hupB1
Name
(GenBank) DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation
KO
K03530
DNA-binding protein HU-beta
Organism
cti
Cupriavidus taiwanensis
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cti03032
]
RALTA_A3140 (hupB1)
03036 Chromosome and associated proteins [BR:
cti03036
]
RALTA_A3140 (hupB1)
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_A3140 (hupB1)
DNA replication proteins [BR:
cti03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RALTA_A3140 (hupB1)
Chromosome and associated proteins [BR:
cti03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RALTA_A3140 (hupB1)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RALTA_A3140 (hupB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Lmo2446-like_N
RsdA_SigD_bd
Motif
Other DBs
NCBI-ProteinID:
CAQ71059
UniProt:
B3R809
LinkDB
All DBs
Position
1:3325731..3326009
Genome browser
AA seq
92 aa
AA seq
DB search
MTKTELIDAIAAGVDGLTKAKAEQALNVTLSAIMDAVAKGDTLSLIGFGTFSKGERGERM
ARNPRTGEEIKVEAAKTVKFKAGQKFKDAVNQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaccgaactgatcgacgctatcgcagccggggtggacggtctgaccaaggcc
aaggccgagcaggcactgaacgtgaccctgtcggccatcatggatgcagtggccaagggt
gacacgctgagcctcatcggctttggcacgttcagcaagggcgagcgtggcgagcgcatg
gcgcgcaacccgcgtaccggtgaagaaatcaaggtcgaggccgccaagaccgtgaagttc
aaggctggccagaagttcaaggacgctgtcaaccagtga
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