Cupriavidus taiwanensis: RALTA_B0203
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Entry
RALTA_B0203 CDS
T00702
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cti
Cupriavidus taiwanensis
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_B0203 (sbcD)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RALTA_B0203 (sbcD)
Archaeal homologous recombinant proteins
RALTA_B0203 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF3203
Motif
Other DBs
NCBI-ProteinID:
CAP63403
UniProt:
B2AI04
LinkDB
All DBs
Position
2:220359..221507
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AA seq
382 aa
AA seq
DB search
MRFLHTADWHLGRLFHARSLLEDQAHLLDQFVALVRNERPDAVLIAGDVYDRAVPPPEAV
ALLDDVLGRIVVDAGVPVVMIAGNHDSAQRLEFGARLMRAQGLHVAGRTLPAASCVRLHD
AHGEVRVYALPYAEPAVVRDAIGTEMPSHEAALRAQLEAIRAVHPPGVRAVVVGHAFVVG
GAASESERPLSVGGSGAVAAELFAGFDLVALGHLHRPQTLGGGRIHYAGSLLKYSLSECA
HQKSVSRIELDADGTVAITPLTLQPLRDVRVVEGELAQLLAAGADDARREDYIHARLTDT
GALLDPMARLRRVYPNALAIERTVLARSGVASEAGRKLRQLGTGELFASFFREVADAELD
PDQRAALDQVLAGIAAAERESA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtttccttcacactgccgactggcatctcggccgcctcttccatgcgcgcagcctg
ctggaagaccaggcccatctcctcgaccagtttgtcgcactggtccgcaacgagcgcccg
gatgcggtgctgatcgccggcgacgtctatgaccgcgccgtgccgccgcccgaggcggtg
gccctgctcgacgatgtgctgggccgcatcgtggtcgatgccggcgtgccggtggtgatg
atcgcgggcaatcacgacagcgcgcagcggctggaatttggcgcgcggctgatgcgcgcg
caggggctgcacgtggctggccgcacgctgcccgcggccagttgcgtgcgcctgcatgat
gcgcacggcgaagtccgcgtctatgcgctgccgtatgccgagccagccgtggtgcgcgat
gcgatcggcaccgagatgccgtcgcatgaagcggccttgcgcgcgcagctcgaggccatc
cgcgcggtgcatccgccaggcgtgcgcgcggtggtggtgggccatgccttcgtggtgggc
ggcgccgccagcgaatcggagcggccgctgtccgtgggcggcagcggcgccgtggccgcg
gaactgttcgccggcttcgacctggttgcgctcggccacctgcaccggccgcagacgctg
ggcggcggacgcatccactacgccggctcgctgctgaaatactcgctgtcggaatgcgcg
caccagaagtcggtatcgcgcatcgaactggatgcggacgggaccgtcgccatcacgccg
ctgacgctgcagccgctgcgcgacgtgcgcgtggtcgaaggcgagctggcgcaattgctg
gctgccggtgccgacgatgcgcggcgcgaggactacatccacgcgcgtctcaccgatacc
ggcgcgctgctggacccgatggcccggttgcgccgggtctatcccaacgcgctggcaatc
gagcgcacggtgctggcgcgcagcggcgtggcgtcggaggccggacgcaagctgcggcag
ctgggcacgggcgagctgttcgccagtttcttccgcgaagtggccgatgccgagctggac
cccgaccagcgtgccgcgctggaccaggtgctggccggtatcgccgcggcggagcgggag
tcggcatga
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