Cupriavidus taiwanensis: RALTA_B0204
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Entry
RALTA_B0204 CDS
T00702
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cti
Cupriavidus taiwanensis
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_B0204 (sbcC)
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RALTA_B0204 (sbcC)
Archaeal homologous recombinant proteins
RALTA_B0204 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_27
SMC_N
AAA_29
AAA_16
nSTAND3
ABC_tran
AAA_21
AAA_22
NACHT
TsaE
cobW
AAA
GTP_EFTU
ATPase_2
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAP63404
UniProt:
B2AI05
LinkDB
All DBs
Position
2:221504..224566
Genome browser
AA seq
1020 aa
AA seq
DB search
MRPLHLTLQAFGPFAATEAIDFTRLGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSGGE
RSAQAMRSANAAAGLRTEVTLTFSLGAQRWRVVRSPVQERPKQRGEGWVTEPARAQLDLH
DGNGWVSKASQPGKVTDAVRELLGFDSAQFRQVIVLPQGRFRELLTASSQARQAILERLF
RTELYRRVEELLKTEAASIRRGAERIAIQREEALRQAGVESAPALADGIATMHAALQALQ
GQEQGARAAQAAAQAALAAGEQVAARLQERQQAQAAHAALLARQAAMDDQRGRLQAAQRA
ARVMPAVQAAQAAQRDHAAGAAALAQATGHAARAGQRAMEAAAALQAQVQQADARQAAQR
RVAQLEAMLPRAQRLGALQRALHEAEARQAAAATARDRAAARLEACRTAAVTAESALGQA
QLAAAQAQASALQLAALQERARQFERYRQAARSLDAANMQAAGYAQAEQHARQQRDRCRT
ALAEAEAAWRAGQAARLAQTLASGDACPVCGSTAHPEPARHIAQPLSDLALEAARQALLE
AEAEAVRCAGQHQAAQLAIAQARERLEELAAALGDASEAAAAGVSADIATRQAALAQQRQ
ESASLAQREAAIAASRAARDSAEAGHRNAVAAADAAAQALAHCRGEWQAESAQVPDDSRD
PVALGEALRQAQAALAGLEQALATAQAAERQAAAEAAGAQAALVSARQSQAQVAERLASA
DAALAHALAQHGFADARAHADACLDDDAMQALDATLRTFDSQLAAAADRRERAEAAAQAL
DAPDLDGLRAALAASAATVEDLVRQQAERGRSRDALLQCQQRLQQLDREGRDIEARFAVL
GRLAEVANGNNPRRMTFQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVREQADQRSAG
GLDIEVFDHDTGAARPANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGT
LDPESLDFALRTLLDLQQAGRLVGIISHVTELRERIDVRLEVRPGSGGSRVVLSGMPAAA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgcatctgacgctgcaggcgttcggtccctttgccgcgaccgaggcgatc
gatttcacgcggctgggcgagcaagccttcgtgctgatccatggccccaccggcgcgggc
aagaccacgctgctcgatgccatctgctttgcgctgtacggcgacacctccggcggcgag
cgcagcgcgcaagccatgcgcagcgccaatgcggcagcgggcttgcgcaccgaggtgacg
ctgacctttagcctgggcgcgcagcgctggcgcgtggtgcgctcgcctgtgcaggagcgc
cccaagcagcgcggagagggctgggtgacggagccggccagggcgcaactggacctgcac
gacggcaatggctgggtcagcaaggccagccagccgggcaaggtcaccgatgccgtgcgc
gagttgctgggcttcgacagcgcgcagttccgccaggtcatcgtgctgccgcaggggcgc
tttcgcgagctgctgaccgccagttcgcaggcgcggcaagccatcctggaacggctgttc
cgcaccgagctgtaccgccgcgtggaagagctgctgaagaccgaggccgccagcatccgg
cgcggcgccgagcgcatcgccatccagcgcgaagaagccctgcggcaggccggggtggaa
tcggccccagcgttggccgacggcatcgcgaccatgcacgccgcgctgcaggcgctgcaa
ggccaggagcagggtgctcgcgccgcgcaggccgccgcgcaggccgcgctcgcggccggc
gaacaggtggcggcgcgcttgcaggagcgccagcaggcgcaggccgcccatgccgcgctg
ctggcacggcaggccgccatggacgaccagcgtggccgcttgcaggcagcgcagcgcgcc
gcgcgcgtgatgccggcggtgcaggccgcacaggccgcgcagcgcgatcacgccgccggc
gccgcggcattggcgcaggcgaccgggcacgcggcgcgcgccgggcagcgggccatggag
gccgccgcagccttgcaggcgcaggtgcagcaggccgacgcacgccaggcggcgcagcgc
cgcgttgcgcaactggaagcgatgctgccgcgcgcacagcggctgggcgcgttgcagcgc
gccctgcatgaggccgaagccaggcaggccgccgctgccaccgcgcgcgatcgcgcagcg
gcgcggcttgaggcctgccgtactgccgccgtgaccgctgaatcggcactgggacaggcg
cagcttgccgcggcacaggcacaggccagcgccttgcagttggccgcgctgcaggaacgc
gcgcggcaattcgaacgatatcgacaagcggcgcgttcgctggacgccgcgaacatgcag
gccgcgggctacgctcaagccgaacagcatgcgcggcaacagcgcgaccgctgccgcacc
gcgctggccgaagccgaagccgcgtggcgcgccgggcaggccgcgcgcctggcgcaaacg
ctggcgtcgggcgatgcctgcccggtctgcggcagcaccgcgcatcccgagccggcgcgg
cacatagcgcagccgctgtcggacctggcgctggaggccgcgcgccaggccctgctggaa
gcggaagccgaagcggtgcgctgtgccggccagcaccaggccgcgcaactggcgatcgcc
caggcacgcgagcggctggaagagctggccgcggcactgggcgatgccagcgaggccgcg
gccgccggtgtcagcgctgacatcgcaacgcggcaagcggcgctggcgcagcagcggcag
gaatcggccagcctcgcgcaacgcgaggcggcgatcgcggcctcgcgcgcggcgcgcgac
agcgccgaagccgggcaccgcaatgccgttgccgcggccgatgccgcggcgcaggcactg
gcccattgccgcggcgaatggcaggccgagagcgcgcaggtgcccgacgattcgcgcgat
ccggtggcattgggcgaggcactgcgccaggcccaggccgcgctggccggacttgagcag
gcgctggcaacggcccaggcggccgagcggcaggccgctgcggaagctgccggtgcgcag
gccgcgctggtgtcggcacggcagtctcaggcgcaggtcgctgaacgcctggccagcgcc
gacgcggcattggcgcacgcgctcgcgcagcatggctttgccgatgcccgcgcgcatgcc
gacgcctgcctggacgatgacgccatgcaagcgctggacgccacgctgcgcacgttcgac
agccaactggctgccgcggccgaccggcgcgaacgcgcggaagctgccgcgcaagcgctc
gatgcgcccgacctggacgggctgcgcgcggcgctggcggcttcggcggcgacggtggag
gacctggtgcggcagcaggccgagcgcggccgttcccgcgacgcgctgctgcaatgccag
cagcggttgcagcaactggaccgcgaaggccgcgacatcgaagcccgctttgccgtgctg
ggccggctggccgaagtggccaacggcaacaacccgcgccgcatgacgttccagcgcttc
gtgctggccaccctgctcgacgaggtgctggaagccgcttccgcgcgcctgctggcgatg
agccgcggccgctatgtgctgcagcgcgtgcgcgagcaggccgaccagcgcagcgccggc
gggctcgatatcgaagtgttcgaccacgataccggcgcggcgcggccggccaacacgctg
tcaggcggggaaggcttcctggcctcgctgtcgctggcgctgggcctggccgacgtggtg
cagtcgcgcgcgggcggcatccagcttgacaccctgttcgtcgacgaaggctttggcacg
ctcgatcccgaaagcctggacttcgccctgcgcacgctgctggacctgcagcaggccggg
cggctggtcggcatcatctcgcacgtgacagagctgcgcgaacgcatcgacgtgcggctg
gaagtgcggcccggctcgggcggcagccgcgtggtgttgagcgggatgccggccgcggcc
tag
DBGET
integrated database retrieval system
