Cupriavidus taiwanensis: RALTA_B0605
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Entry
RALTA_B0605 CDS
T00702
Name
(GenBank) DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (modular protein)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03030
DNA replication
cti03430
Mismatch repair
cti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RALTA_B0605
03430 Mismatch repair
RALTA_B0605
03440 Homologous recombination
RALTA_B0605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cti03032
]
RALTA_B0605
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_B0605
Enzymes [BR:
cti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RALTA_B0605
DNA replication proteins [BR:
cti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RALTA_B0605
DNA repair and recombination proteins [BR:
cti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RALTA_B0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAQ71225
UniProt:
B3R8V7
LinkDB
All DBs
Position
2:complement(656537..658135)
Genome browser
AA seq
532 aa
AA seq
DB search
MPDLPTYLPSRLPADGARLLDAQSLAAALSRPIVFVDLETTGADAQRDRITEIGVVEVGP
DGIVEWETLLDPGMSIPPFIQRMTGISDDMVRGQPTFESLAESLAERLQGRLFVAHNARF
DYGFLKNAFRRAGVTFRADVLCTVRLSRSLFPSVERHGLDALIARFGLTPKGRHRALADA
ELLWQFWQKIHATYSVELVEAAVRTLVRRASLPAGLEETALEDVPASPGVYIFYGDQDVP
LYVGKSVHLRQRIGAHFSGDYRYGKDMRLARLVRRVEWRETGGETGALLLEAQLVKAMQP
VHNQMLRRNTRLYAWELPQQLPVPRLRSDRDTDFCRHRDLFGVFGSRGAAEARLRALAEE
HGLCMATLSLEKTTRRGSPCFARQVHRCAGACVGAESPREHRARLAAALGPIALLPWPFD
GAVAWREQHGARACWHVVDEWCYLGCADTLEDAGALAAAPAHFDLDTYQILAPRRDQWMP
DAVPLSVRRDFTLTAPEAPAEAPRPGRVAPSHAARKSSAAGQQSLGLFADQA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccagacttgcctacctacctgccgtcgcgcctgccagcggacggcgcgcgcctgctc
gacgcccagtcactggccgctgccctgtcgcgccccattgtctttgtcgacctggagacc
accggcgcggacgcccaacgggaccgcatcaccgagatcggcgtggtcgaggttggcccg
gacggcattgtcgaatgggagacactgctggaccccggcatgtcgattccgccgtttatc
cagcgcatgaccggcatcagcgacgacatggtgcggggccagccgacctttgagtcgctg
gccgagtcgctcgcggagcgcctgcaggggcgcctgttcgtggcccataacgcacgcttc
gactatggcttcctgaagaacgcgttccgtcgcgccggtgtgacgttccgggctgacgtg
ctgtgcaccgtccggctctcgcgctcgctgtttccgtcggtagagcgccatgggctggat
gccctgattgcccgcttcggcctgacgcccaagggccggcaccgcgccttggccgatgcc
gagctgctgtggcagttctggcagaagatccatgccacgtattccgtcgaactggtggaa
gcggccgtgcgcaccctggtgcggcgcgcaagcctgccggccggcctggaagaaaccgcc
ctcgaagacgtgccggcgtcgcccggcgtctatatcttctatggcgaccaggacgtgccg
ctctatgtcggcaagagcgtgcacctgcgccagcgcatcggcgcccatttttccggcgac
taccggtatggcaaggacatgcggctggcgcggctggtccgccgggtcgaatggcgggag
accggcggcgaaaccggcgccctgctgctcgaggcccagctggtcaaggccatgcagccg
gtgcacaaccagatgctgcgccggaatacgcgcctctacgcctgggaactgccgcagcag
ttgccggtgccgcgcctgcgctcggatcgcgacacggacttctgccggcatcgcgacctg
ttcggcgtcttcggcagccgtggcgcggccgaggcgcgcctgcgcgcgctggccgaggag
catggcctgtgcatggccacgctgtcgctggaaaagaccacgcgccgtggcagcccctgc
tttgcgcgacaagtccaccgctgcgccggtgcctgcgtcggtgcggaatcgccgcgcgaa
caccgtgcccggctggccgcggcgctgggtccgatcgcgctgctgccatggccgttcgac
ggcgcggtggcctggcgcgagcagcacggcgcgcgggcctgctggcacgtggtggacgag
tggtgctacctgggctgcgcggacacgctggaggatgccggcgcactggccgccgcgcca
gcgcatttcgacctcgacacctaccagatcctggcgccgcgccgggaccaatggatgccg
gacgccgtgcccctgtcggtgcgccgggacttcaccctgaccgcgccggaagcgcccgcg
gaagccccgcgacccggacgcgtggcgccgtcgcatgccgcgcgcaagtcttccgccgcc
ggtcagcaaagcctcggcctgttcgccgatcaggcctga
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