Cupriavidus taiwanensis: RALTA_B1170
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Entry
RALTA_B1170 CDS
T00702
Name
(GenBank) ATP-dependent DNA helicase, DEAD_2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cti
Cupriavidus taiwanensis
Pathway
cti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RALTA_B1170
09124 Replication and repair
03420 Nucleotide excision repair
RALTA_B1170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cti03021
]
RALTA_B1170
03036 Chromosome and associated proteins [BR:
cti03036
]
RALTA_B1170
03400 DNA repair and recombination proteins [BR:
cti03400
]
RALTA_B1170
Enzymes [BR:
cti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RALTA_B1170
Transcription machinery [BR:
cti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RALTA_B1170
Chromosome and associated proteins [BR:
cti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RALTA_B1170
DNA repair and recombination proteins [BR:
cti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RALTA_B1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAQ71772
UniProt:
B3RA47
LinkDB
All DBs
Position
2:1224347..1226617
Genome browser
AA seq
756 aa
AA seq
DB search
MPAQPAYVVAVRALCEFTAKAGDLDLRFVPTPSAQDGVAGHGVVTGRRGAGYQAEVALSA
DFGPLHVRGRADGYDPAANRLEEIKTFRGDAAVPDNHRHLHWAQARIYGWLLCRKLGLPG
LEIAVVYFDIVSQREHPVVAHFDAPALEAFFVQSCERFLHWAQAEMAHRQARDAALAQLA
FPHQGFRPGQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQRLDKVFFL
SARSTGRAVALHAAAALRAHGAQPLRVLELTARDKACEHPELACHGESCPLARGFYDRLP
AAREAARAVPVRDREAVRALAREHAVCPYYLAQELVRWSDVVVADYNYYFDRSAMLYALT
VANGWRASVLVDEAHNLVERGRAMYTAELDPQALRALRRSAPAAVSRPLARLARQWNTLA
RQGDDAYEVLPDVPAAFRRALDECCAAALAYMTEHPGAHDPALQRFYFDALHFARLAEQL
DANSLFDIQRTPRGRRGHHARLCLRNVIPAPFLRPRLAAAHSVTLFSATLDPADYYLDTL
GLPADCARVQVPSPFRADQLSVRIASRISTRYARREQSLPAIVALMADQFRARRGNYLAF
FSSHEYLQQAVARFAVSHPDIPHWVQARGMDEAAQAAFLAAFVEGGEGIGFAVLGGAFAE
GVDLPGERLIGAFVATLGLPQFNAVNEQFRARMEQAFGQGYAYAYLYPGLRKVVQAAGRV
IRTQQDQGVLYLIDDRFAAAQVRGLLPSWWEIAPAA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcgcaaccggcgtacgtggtcgccgtgcgcgcgctgtgcgagttcaccgccaag
gccggcgacctggacctgcgcttcgtgccgaccccgtcggcgcaagacggggtggcgggg
cacggcgtggtgaccggccgccgcggtgcgggctaccaggccgaagtggcgctgtccgcg
gatttcggtccgctccatgtccggggccgtgccgatggctacgatccggctgcgaaccgg
ctcgaagaaatcaagacgttccgcggcgatgccgccgtgccggacaaccaccgccacctg
cactgggcgcaagccaggatctacggctggctgctgtgccgcaagctggggctgccgggg
ctggagattgcggtggtctatttcgacatcgtcagccagcgcgagcatccggtggtggcg
catttcgacgcgccagcgctcgaggcattctttgtccagtcctgcgagcgcttcctgcac
tgggcgcaggccgagatggcacaccggcaggcgcgcgatgccgcgttggcgcagctggcg
ttcccgcaccagggctttcgcccgggccagcgcgaactggcccaggcggtctacaacgcc
aaccgcgccgggcgccacctgctggcgcaggcgcccaccggcatcggcaagtcggtcggg
acgctgttccccgtgctcaaggccatgccgggccagcggctcgacaaggtgttcttcctc
tcggcccgctccaccggccgcgcagtggcgctgcacgccgccgcagccttgcgcgcccat
ggcgcgcagccgctgcgcgtgctggaactgaccgcgcgcgacaaggcctgcgagcatccc
gagctggcctgccatggcgaatcctgtccgctggcgcgcggcttctatgaccgcctgccg
gccgcgcgcgaagcggcgcgcgccgtgccggtgcgcgatcgggaagcggtgcgcgcgctg
gcgcgcgaacatgccgtctgcccttactacctggcccaggaactggtgcgctggagcgac
gtggtggtggccgactacaactactacttcgaccgcagcgcgatgctttatgcgctgacc
gtggccaatggctggcgcgccagcgtgctggtggacgaggcccacaacctggtcgagcgc
gggcgcgcaatgtacacggcggagctggatccgcaagcgctgcgggcgctgcgccgcagt
gctcctgcggcggtgtcccggccgctggcgcggctggcgcggcagtggaacacgcttgcg
cgccagggtgacgatgcctacgaggtcctgccggacgtgcccgcggcatttcgccgtgcg
ctggacgaatgctgtgcggcggcgctggcctacatgaccgagcatccgggcgcgcacgat
ccggcgctgcagcgtttttacttcgacgcgctgcatttcgcccgcctggccgagcagctc
gatgcaaattctctgttcgatatccagcgcacgccacgcggccggcgcggccaccatgcc
cggctatgcctgcgcaatgtcatcccggcgccgttcctgcgcccgcggctggccgccgcg
cattcggtcacgctgttttccgcgaccctcgatccggcggactattacctggacacgctg
ggcttgccggccgattgcgcgcgcgtgcaagtgccatcgccgtttcgcgccgaccagctc
tcggtacggatcgcctcgcgcatctccacgcgctatgcgcggcgcgagcagtcgctgccg
gccatcgtggcgctgatggcggaccagtttcgcgcgcgccgcggcaactacctggccttc
ttcagcagccacgaatacctgcagcaggcggtcgcccgctttgccgtgtcgcacccggac
atcccgcattgggtccaggcacggggcatggatgaagccgcgcaggcggcgttcctggca
gcctttgtcgagggcggcgagggcatcggctttgcggtactcggcggcgcatttgccgaa
ggcgtggacctgccgggcgagcgcctgatcggcgccttcgtcgccacgctggggctgccg
cagttcaacgccgtcaacgaacagtttcgcgcgcgcatggagcaggcgttcgggcagggc
tacgcttatgcctatctgtatccggggctgcgcaaggtggtgcaggcggccggccgcgtg
attcgcacgcagcaggaccagggcgtgctgtatctgatcgacgaccgctttgccgcggcg
caggtacgcggcttgctgccgtcatggtgggaaatcgcaccggcggcgtag
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integrated database retrieval system
