Crotalus tigris (Tiger rattlesnake): 120297012
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Entry
120297012 CDS
T08476
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120297012 (CHD6)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120297012 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120297012
NCBI-ProteinID:
XP_039175071
LinkDB
All DBs
Position
Unknown
AA seq
2746 aa
AA seq
DB search
MIMKIQKKEKQLPNFKVLSHSPMSDASITFECKPQSPFDGSPDQEDLSDLVTISDLASVS
LAHKDHQNVLSVEVPSEIVQNMITCHNGMQDDGGGGTGVKKKRKKKELGQQEMGNEREVK
PKRKREPKEPKDPQKPKEPKKPKEPKQEGAKKPRKPREPKVPKESKEKKNILETSSKAKP
KKSSMEQGPTPVEKKKKGKRKNDTSLDNLELDQGLLSLSGQNLDESVESVDSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIEKILASR
MVQKEIYPGGATYEQEEFYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDSETGEEVTHYLVKWCSLPYEESTWELEEDVDP
GKIKEFEFLQIPPEVKSLDRPASESWQKLEKSRDYKNNNQLRDYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIYLMGLRGPFLIIAPLSTITNWEREFRTWTELNAIVYH
GSQISRQMIQQYEMVYRDMQGIPLPGLFKFQVVITTFEMILADCPELKKIHWRCVIIDEA
HRLKNRNCKLLEGLKLMCLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG
DLKTEEQVKKLQSLLKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFHKTHNSEAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSNNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTQTITIQTEGKGSTFSKASFVASGNRTDISLDDP
NFWQKWAKIAELDTDAKDEKESLVIDRPRVRRQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVRHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKN
ADWLTTCNPEIILHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPAKDL
DVLLPDIDYVEIPVDWWNADADKSLLIGVFKHGYERYNAMRADPALYFLEKVGMPDEKLL
CAEQNVTDGVQDAPERGNTDKEESSADKLAGVDKQEEISDTCGPDPEKKDDNVAAQDGSD
PDKFSWPVSSALTARLRRLVTIYQRCNRKELPSRPDVIGPCNHGYWLQEEMIRRANEMDP
MNNEIQKRWTRREQADFYRTVSSFGVIYEPEKKVFDWTQFRSISRLEKKTDESLEKYFYN
FVAMCKNVCRLPHWKDDGPTDPNIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQNKRT
GVLGEEHLCCHHQANSKLYYSPLYNQVERKQALAEAEIDNCAKLMNSGNDLLQAENNSQD
GSCENFMSKVRSMISVNYDESSLPDSLSCIMYDEKACNSEHSSFARDSPSCTDISSNATK
MAEGKTDGDEDLSSCDAETIRESTYLDHLQFGSDQLESQNTGQELSEKETKPSESFAQET
CNVLQHMENRYISPKAVPFERDGVESVLSIGIYSPSLHNFDIKVQPEKRLMGLLQEKSLE
EKLMQSQSLSEEEEEEEEEEEEDHLEAATDIVKDSGEAKCSIQEEQKHNSCILTTLDAFM
EERNKVLVESVSSELAASKCDSEPGMGEDDQAECESLEEHTPGLQEIQTCLHHYHHSART
QASAIQVELLKSHPVCMEGDLWGDDTEEKRDSPIAQPLYESEMKREEECEHQDLEKRDGI
SQNQDGFEKFSEDESKSSAFAVPGENDELHDVRAPTIAQLLQEKTLYSFSEWPKDRVIIN
RIDNICHAILKGKWPSSSQTFDIPYMMTTPALVSSTCNRSGYTEPEVSESSFSNGVLATQ
LPKETFLAPTFVKDESKHRQSYEFEMERDTKHRSLDQLVASHSHTSAVLNGWRDAVDLSR
VPDGTSGSSTPFSMSTNIPKIGAVNALQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDD
AAIRRRRGRRKNVEGIDLILLKERNLQAGLPEDEGQTITSNSNSDGPVLTTSNQQTVPAT
NVQTDKIVPNKSLLDWLRQQSDYTLEIPGFGTNFSEKPKQRRQRCKDPSKLDINSLTGEE
RVPVVHKGTGRRLGGAMAPALKELPRWLDANMEYAVAADWCDIVKLSGFLPESKFNRILT
EPVLRDIGPRRRGRRPRSDLFKTPGIGADASSGMGPLFMNGLIAGMDLVGLQTMRNMQGI
PLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMAAVPQMFGVGGLLNPSIATTCTSTA
PTSLASTTKSGTTHSENEIEDKQNTQGSKIETVSEDKLSPNSFSDQSEPAITTSSPVAFN
PFLIPGMSSGLIYPSMFLSPGIGMALPGLQQTRHSEATNLESQKRKKKKTKGELANVDSE
MLSLSDKEHANKQNCTEQIPYVSMEHERDVPAEEEEEELKEIKDIS
NT seq
8241 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagaaaaacagctgccaaattttaaagtgttgagtcat
tccccaatgtctgatgcctccatcacttttgaatgcaagccacagtccccttttgatgga
agtccagatcaggaagatttgagtgacttggtgacgatctctgacttggccagtgtgagc
ctggcccataaggaccatcaaaatgtgctatctgtggaggtacccagtgagattgtgcag
aatatgataacctgccataatgggatgcaggacgatgggggtgggggtactggagtaaaa
aagaaacgaaagaaaaaagagctggggcagcaagagatgggcaatgagagagaagtcaaa
ccaaagaggaaaagagaacctaaggaaccaaaagatccccaaaagcccaaggagcccaaa
aagcccaaggagcccaagcaggaaggggctaagaaaccgaggaagcctcgggagcctaaa
gtcccaaaggagtccaaagagaagaagaacatcttagagacttcctccaaagccaagccc
aagaaatccagtatggagcaaggaccaactcctgttgaaaagaagaagaaaggaaaaagg
aaaaatgacacgtcacttgataatttagaattggatcaaggcctactttcattgtctgga
caaaaccttgatgaatctgttgaatcagttgacagtcagaagcgccgttctggacgccag
gtgaagcgtaggaagtacaatgaagatttggatttcaaggtggttgatgatgatggtgaa
acaatagctgtgctgggtgctggccgagcttctgcactttctgcatctaccttggcttgg
caagcagaggaacctcctgaggacgatgccaacatcattgagaaaattcttgcctccagg
atggtgcagaaagagatttatcctggaggagcaacttatgaacaggaagagttctatgta
aagtaccgcaatttttcttatttgcactgtaaatgggccaccatggaggagctagaaaaa
gatccccggatctcccagaagattaaacgctttcgcaataaacaggcccaaatgaagcat
attttcactgagcctgatgaagacctattcaatccagactatgtggaagttgatagaatc
ctagaagtggctcacacaaaggactccgaaactggggaggaggtgactcactacctggtg
aagtggtgctccttaccctatgaagaaagcacttgggagcttgaggaggatgttgatcct
gggaagattaaagaatttgaatttctccaaattccaccagaagttaaatccttggaccgt
cctgcctcagagtcctggcaaaagctggagaagtctcgggactataagaataacaaccaa
ttgcgagactaccagctggagggaatgaattggctgctttttaactggtataacaggaaa
aactgcattctggctgatgaaatgggtttggggaagacgatccagtccattacattcctc
tctgagatctatctgatgggtcttcgaggtccatttctcatcatcgctccactttctacc
atcacaaactgggagcgagaattccgcacttggaccgagttgaatgccattgtgtatcat
ggcagccagataagccgccagatgatccagcaatatgagatggtttatcgggatatgcag
ggtattcctcttcctgggctcttcaaattccaagtagttattaccacctttgagatgatc
ctggcagattgtccggagctgaagaagatccactggcgctgtgtgattattgatgaggcc
catcggctcaagaacaggaactgcaaattactggaaggattaaagctcatgtgtctggaa
cacaaagtactgctgactgggacgcctctgcagaactcagtggaggagctcttcagccta
ctgaacttcttggaaccacagcagttcccatcagagacagcctttcttgaggagtttggg
gatctcaaaacagaggaacaggtgaagaaacttcagtccctcctaaaacccatgatgttg
cgacggctgaaggatgatgtggagaagaatctagcacccaaacaggagactataattgaa
gtagagctgactaacatccagaagaaatactatcgagctatcctggagaaaaattttagc
tttctatccaagggtgctaaccagcataacatgcccaatctcattaataccatgatggag
ttgcgcaagtgctgcaatcacccctacctcattaatggagcagaggaaaagatcctagaa
gatttccataaaacccacaactcagaagctcctgacttccagttgcaggcaatgatccag
gcagcaggcaagctggtgctgattgataagttgctgccaaagttgattgcaggcgggcac
aaggtgttgatcttctcccagatggtgcgctgccttgatattctggaggattatctcatc
cagcggcgatatacttatgagcgcattgatggccgggttcgtgggaatttacgtcaggct
gcaatcgatcgcttctgcaagccagattcagaccgttttgttttcttgctctgcacaagg
gcaggaggtctaggcatcaatcttactgctgctgatacctgtatcatctttgactcagat
tggaatccacagaatgatctgcaggctcaggctcgctgccaccgaatagggcaaagcaag
gcagttaaagtctatcgcctcatcaccagaaattcctatgaacgagagatgtttgacaag
gccagcttgaaactaggattagacaaggcagtgttgcaggatatcaaccgcaagggaagc
aacaatggggtgcagcagctctccaagatggaggttgaagacttgttgcgaaaaggtgct
tatggggctttaatggatgaggaagatgaaggctccaaattctgtgaagaagatatcgac
caaatcctgcaacgtaggacccaaaccatcactattcagactgaagggaaaggctccaca
ttttccaaggccagctttgttgcttcaggaaacagaactgacatttcattagatgatccc
aacttctggcagaaatgggcaaaaatagctgaactggatactgatgcaaaggatgaaaag
gagagcctggtgattgacaggccccgggtccgtaggcaaaccaaacactacaactccttt
gaggaagatgagctgatggagttctcagagctggacagtgactctgatgagcgacctaca
cgttcacggcgtctcaatgaaaaaacacgtcggtatttaagggctgaatgttttcgtgtg
gagaaaaatctgcttatatttggctggggacgttggaaagatattctgacccatggccgg
tttaaatggcatcttaatgaaaaggatatggagatgatatgccgagcactgctggtctac
tgtgttagacattataagggagatgagaagattaagagttttatttgggatttgatcacg
ccaacaaaggatgggcagaaccaagccctacagaaccattcaggattatcagctccagtg
ccaagaggaaggaaggggaagaaaaccaagaatcaaatgctgctacctgagattaagaat
gcagactggcttactacttgcaatcctgaaatcatcctacatgatgatagctacaaaaaa
catctgaaacaacactgcaataaagtgctgttgagagtacggatgctctattacttgaaa
gctgaagtgctgggggaggcagctgataaagcttttgaaggaacccctgccaaagattta
gatgtcttgctgccggacattgactatgtggagattcctgtggactggtggaatgctgat
gcagataaatccctcctcattggagtttttaaacatggttatgaacggtacaatgcaatg
cgagctgacccagctctgtactttcttgagaaagtgggcatgccagatgagaaactattg
tgtgcagagcagaatgtcactgatggagtacaggatgctccagaacgaggaaatacagac
aaagaagagagtagtgcagataaactagctggagtagacaaacaggaggaaatttctgat
acttgtggaccagatcctgagaagaaggatgacaatgtggcagcccaggatggctccgac
ccagacaaattcagctggcctgtgtcatctgctctcacagccagacttcggcgtcttgtc
actatctatcagcgctgcaaccgcaaagaactgccgtctagacctgatgttattggacct
tgtaaccatggctattggctccaagaggaaatgattagacgagccaatgaaatggaccct
atgaacaatgaaatacagaaaaggtggaccagaagagagcaagcagatttctatcgtact
gtttcctcatttggggtcatttatgagccagaaaagaaagtctttgattggactcaattc
cgatccatttcgcgtttggagaagaaaactgatgaaagtttagaaaaatatttctataac
tttgttgctatgtgtaaaaatgtctgtcggttgccccactggaaagatgatggtccaaca
gatcctaatatttatgtggaacccatcacagaggaacgtgctgcaaagacgctgtatcga
attgaactcttacggaaggtccgtgagcaagtgttgaggtgtccacagttacatgaaagg
ctcaaactttgccgcccaagcctatatctccctgtgtggtgggaatgtggcaaacatgat
cgggatctgctaattggtacggctaagcatgggctgaatcgcacagactattatataatg
aatgatccacagttatcgtttctggatgcctacagaaattatgctcagaataaaaggaca
ggggtccttggagaagaacacttgtgctgtcaccaccaagcaaattctaaactatattac
tcgcctttgtataatcaagtagaaagaaagcaggcattagcagaggcagaaatagataac
tgtgctaagctaatgaactcagggaatgatcttttgcaggcagaaaacaactctcaggat
ggcagctgtgaaaatttcatgtctaaggtccgaagtatgatttctgttaactacgatgag
agttctttacctgattctttgtcgtgcataatgtatgatgaaaaggcctgcaatagtgaa
catagttcttttgctcgtgatagccctagctgcacagacatcagcagcaatgctaccaaa
atggcagagggcaaaacagatggggatgaagatctctctagttgtgatgctgagaccata
cgagaatccacttacttggatcatttgcagtttggcagtgatcaattggaaagtcaaaat
acaggacaggagctttcagagaaggagacaaagccttctgagagttttgctcaggaaacc
tgtaatgtccttcagcatatggaaaatcggtatattagcccaaaagcagttccatttgaa
agagatggtgtggagagtgttctgagcatagggatctatagtcccagtcttcataatttt
gatatcaaagtacaacctgagaagagattgatgggcttattgcaggaaaagagtttggag
gagaaattaatgcagagtcaaagccttagtgaagaggaagaggaggaggaggaagaggaa
gaggaagatcatctggaagcagcaactgacattgtgaaagatagcggagaagccaaatgt
agcatacaggaggaacagaaacacaattcatgtattctcaccactctggatgcattcatg
gaggaaaggaataaggtcctagttgaatcagtctcaagtgagctggcagcatccaaatgt
gatagtgagcctgggatgggtgaggacgatcaagctgaatgtgaaagccttgaggagcac
accccaggcttgcaggagattcagacctgtctccaccactaccaccactctgcaagaacc
caggcttcagcaattcaagtggaactccttaagtcacacccagtttgcatggaaggagac
ctctggggagatgatactgaagagaagagagatagtcctattgctcaacctctttatgag
agtgaaatgaagagagaagaagagtgtgagcaccaagacctagagaagagggatggaatc
agtcaaaatcaagatggctttgagaagttttctgaagatgaaagtaagagctccgcattt
gctgttcctggagagaatgatgaacttcatgatgttcgggcgcctaccatagctcaactt
ttacaggagaagacgctctactctttctcggagtggcccaaggatcgagtgatcattaac
cgtattgacaacatctgtcatgcaattttaaagggaaagtggccttcttccagtcaaact
tttgacataccatatatgatgaccactcctgccttagtcagcagtacttgcaataggagt
ggctatactgaaccagaagtctctgaatccagttttagcaatggagtgttagctacacag
ctcccaaaggaaacttttctggctcccacctttgtcaaagatgaatcgaagcaccggcaa
tcatatgaatttgaaatggagagagataccaagcaccggagtcttgaccagcttgtagca
tcccactcccatacttcagctgtattaaatggctggcgggatgcagtagatctctcaaga
gtgccagatggaacttcaggaagcagcactccattttccatgagcacaaatatacctaag
ataggggcagtgaatgctcttcagggctcccttggtatggacttgtctggaatccttcaa
gcagggctaattcatcctgtcacaggacagattgtcaatggaagcttacgaagagatgat
gctgctatcagaagacggcggggtaggagaaaaaatgtggaagggattgacctgatactt
ttgaaggagagaaacctccaggcagggctgcccgaagatgaaggtcagaccataacaagt
aattctaattcagatgggccagtcttaactacctcaaatcaacagacagttccagctact
aatgtccagacagataagattgttccaaacaagagtcttctggattggctgagacagcag
tctgattacactctcgaaatccctggctttggcacaaatttttcagaaaagcctaaacag
agaaggcagcgttgtaaagatcctagcaagttagacataaattctctcactggagaggaa
cgggtgcctgtggtgcacaagggcacagggcggaggttagggggagccatggcgccagct
ttgaaggagttaccaaggtggcttgatgcaaacatggaatatgctgttgcagcagactgg
tgtgacatagttaagctttcaggttttttacctgaaagcaagtttaatcgtattctcact
gaacccgtactcagagacattggacctcgacgaagaggaagaaggccaagaagtgacctc
tttaaaactccaggaataggagcagatgcttcgtctggaatgggaccattattcatgaat
ggacttatagctggaatggatttagtaggacttcagactatgagaaacatgcaaggtatt
cctttgactggactggttggctttcctgctggatttgcagcagtacctgctggtgaggat
gttaaaagtactctgagcatgttgccaatgatgttaccagggatggctgctgtaccacag
atgtttggtgttggaggacttcttaatccatcaatagctactacttgtacttcaactgct
ccaacttcattagcaagcacaactaaaagtggtacaacacattcagaaaatgaaattgaa
gacaaacaaaatacccaaggttcaaaaatagaaactgtttctgaagacaaattgagtcct
aattcattttctgatcagtcagaacctgcaataacaaccagtagtcctgtagcctttaac
ccatttcttattcctggaatgtcatctggactgatatatccctcaatgtttctttctcct
ggtattggtatggccttgccaggtcttcaacaaaccagacattcagaagcaacaaaccta
gaaagtcagaaaagaaaaaaaaagaaaactaaaggggaattagcaaatgtggactcagaa
atgctctcactgtctgacaaggaacatgctaacaagcaaaactgtacagaacaaatacca
tatgtgtcaatggagcatgaacgtgatgtaccagcagaggaggaggaagaggagttaaaa
gaaattaaagatatcagttag
DBGET
integrated database retrieval system
