Crotalus tigris (Tiger rattlesnake): 120297157
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Entry
120297157 CDS
T08476
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04137
Mitophagy - animal
ctig04140
Autophagy - animal
ctig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120297157 (HIF1A)
04137 Mitophagy - animal
120297157 (HIF1A)
04148 Efferocytosis
120297157 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120297157 (HIF1A)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120297157 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
120297157
NCBI-ProteinID:
XP_039175387
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MEPCRTTDGPCEKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHHVSAHLDKA
SVMRLTISYLRMRKLIEADDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDMIYTSENVN
KCVGLTQFDLTGHSLFDFTHPCDHEELREMLIHRNGSVKKGKDQNTERSFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRVYENYNNQTVCGYKKPPMTCLVLICEPIPHPSNIEVPL
DSKMFLTRHSLDMKFSYCDERITELIGYEPEELLGRSVYEYYHALDSDHLTKTHHDMFAK
GQVTSGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQRDLVFSLQQT
ERMLKPVDSPEMGMIKVLNNSDLEDSSSLFEKLKKEPDALAYLAPAAGDTIIALDFDNDE
PEEQQSDDVPLYNDVMLPSSNEKLQNINSAISPLSASETTKPLCSSADPALNREVVAKLE
PSTEPLDLTFSSRRTQDQPATPSDRSTSQSSPEPNSPPNDYCFSVDNEIASEFKLELVEK
LFAIDPESKNPFSMQETDLDLEMLAPYIPMDDDFQLRTFDQLSPLEGSTANSSNVTPATG
FQQTPMQSSATDTIKSMTVRHETDPKMLVTSAPINPQRLTDPAPIISPPASPYPKNQSRT
SSPVRTGNGTIDQRDQMSPGAPDLLTVTFGNRSTEANEDISPRIIALHNIQRKRKMEQDG
LLFQAVGIGTLLAQPGPPGTNISLAWKRVKGCRSNGQNEVAEKTVILLPSDIASKLLGQS
MDEKGLPQLTSYDCEVNAPIQGNRNLLQGEELFRALDQIN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggagccttgcaggacgacggatggcccctgcgagaagaaaaggattagctcggaacgt
agaaaagagaagtctagagatgcagccaggtgtcggaggagtaaggaatcagaagtgttc
tatgaacttgctcaccagttgcctcttccccatcacgtgagcgcacatcttgataaagcc
tctgttatgaggcttacaatcagctacctgcgtatgagaaagctgattgaagcagatgac
ttagaggcagaagctgaaatggagacacagttgaattgtttttacttaaaagctcttgat
ggatttgttatggtcctctctgaagatggtgacatgatctatacttctgaaaatgtgaac
aagtgtgtgggactcactcagtttgacttgacaggacacagcctgtttgatttcactcac
ccatgtgatcatgaagagttgagagaaatgctcatccatcgaaatggatctgttaaaaag
ggaaaggatcaaaatacagaacggagttttttcctcagaatgaaatgtacattgaccagc
agaggaagaactgtgaatataaaatcagccacatggaaggtacttcattgtacaggtcat
attcgtgtttacgagaattacaacaatcagactgtgtgcggctataaaaagcctcccatg
acatgtttggtattaatttgtgagcctatacctcatccatcaaatattgaagtcccattg
gatagtaaaatgttcctcacccgtcatagccttgacatgaaattttcctattgtgatgaa
aggattacagaactaatagggtatgaacctgaagaactcctggggcgttctgtatatgaa
tattatcatgcactggactctgatcatctgaccaaaacacatcatgacatgtttgccaaa
gggcaagtcaccagcggacagtatcgaatgcttgccaagcaagggggctatgtgtgggta
gagactcaagcaactgttatatacaatactaagaattctcaaccacaatgtatagtgtgt
gtgaactatgtcttgagtggaattgttcaaagggacttggttttttcacttcagcaaacg
gagcgtatgttgaaaccagtggattctcccgagatgggaatgataaaagtactcaataac
agtgatctggaagatagcagcagcctctttgagaagcttaaaaaggaacctgatgcatta
gcctatcttgctcctgctgctggagataccataatagcattagatttcgacaatgatgag
ccagaagaacaacagtctgatgatgttcctttgtataatgatgtaatgctcccctcatcc
aatgagaaactgcagaatataaattcggcaatttccccactatctgcttcggaaacaaca
aagccactctgtagcagtgctgacccagcactcaatagagaggtggtggccaaactggag
cccagcacggagcctttagatcttactttctccagccggcggacccaagatcaaccagct
actccttctgatagaagcactagccaaagctcacctgagcccaatagtcctcctaatgat
tattgcttcagtgtggataatgagatagcaagtgagttcaagctggaattggtggaaaag
ctctttgcaatagatccagaatcaaaaaacccattttcaatgcaggaaacagatttagat
ttggaaatgttagcaccttatatccccatggacgatgatttccagttgcgcacattcgat
cagctttctccactggagggcagtactgcaaattcttctaatgtgactcctgcaacaggg
tttcagcaaactccaatgcagtcatctgccactgacacgataaaatccatgacagtcaga
catgaaactgatccgaagatgcttgtaacatctgctcctattaacccccaaagactcaca
gaccctgctcccataatcagtcccccggcatcaccttatcctaagaatcaaagtcggact
tcatctccagtcagaacaggaaatggcacaatagaccagagggaccaaatgagtccagga
gcaccggacttgttgacagttacttttggtaacagatcgactgaagcaaatgaagacatc
agtccaaggataatagctctccataatattcagaggaaacggaaaatggagcaggacggc
ttacttttccaggcagtaggaattggcacattattggcacaaccggggcctcctggaaca
aatatatcactggcttggaaacgtgtaaaaggatgcagatcaaatggacagaatgaggtg
gcagagaagactgtaattttattaccatcagatatagcaagtaaacttctagggcagtca
atggatgagaagggactcccacagcttaccagctatgattgtgaagtcaatgctcctata
caaggcaaccgaaacttgttacaaggtgaagagttgttcagagccctggatcagatcaac
tga
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