Crotalus tigris (Tiger rattlesnake): 120297307
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Entry
120297307 CDS
T08476
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120297307 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120297307 (NDC1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120297307 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
SoxE_N
GP41
Motif
Other DBs
NCBI-GeneID:
120297307
NCBI-ProteinID:
XP_039175725
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MGDVSTREQLSILRWRATASIAWSVLLLPLCVAVFIIISSIDLFHPVQWITNSFNDLYTS
YVIFCILLLSVVILVINVFNVQFHTVVPSIHCSRLALISKIIHPQQVIHSIAHAVMGVLV
AWCAAVMTKGKFLFLSMPCTATTTESAADATLRTCLNEYHLFILLLGAFMGYSYSLRYLI
HNLNYLPFPAIQQYKYLRFRRSLPLLAKHSCVESFYMVRNFCAVYYFFGYIPRTWIMTTM
NIQPDSNLPLLDTVTGLLDLSLLYHSWLCGLFLLMTWYIAWLLFRIFSTEAHHFPVQPTF
AEEADQCLPKILNSNPPPLLKFLALQDLMFLSQYSSVRRQAVFSLSQPGGHPYNWTSICG
ECLNLLSELTQKLIIQQEIAAANGRMKQPSPGDLTQSFSSPAPEESSFQTPRTGIFPPAH
MHSLVKSSLLPLKTSPASDLGSNLGSPFNTSLLGHKPGLLELNSPWHGSVQSPHIMRRGP
KLWTSSSDLQLTGYPDEPRPMVVVAKDAKEAAQPGSFYIWLQNKKEQIKNFLSKRVLIMY
FFNKHPEASIQALFSDTQMHIWALEGLSHLVAASFTEDRYGVVQTTLPAILNSLLTLQEV
IDKHFKLPHVSSKPPKTSGNLADTSYKTLRFALRSSLKTAIYRITTTFGEHLNAVQVSSE
HKKRLQQFLEFKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtttcaacgcgggaacaactgagtatcttaagatggagagcaacagcaagc
attgcttggtctgtgctgttgcttcctttgtgtgtggcagtgttcatcatcattagcagt
attgatctcttccatcctgttcagtggatcacaaattctttcaatgatttatatacgtcc
tatgtgatcttttgcatactactgctgtctgtggtgatactggtaataaatgtcttcaat
gttcagtttcacacagttgtgccttctattcactgctcccgattagccctaataagcaag
attatccacccgcagcaagtgatccattcaattgcccatgctgtgatgggggtgctggtg
gcttggtgtgctgctgttatgaccaaggggaaattcctctttttgtccatgccctgcaca
gctacaactacagaaagtgctgctgatgctacccttcgcacgtgcctgaatgaatatcat
ctcttcattttgctccttggagcttttatgggttatagttacagtctccgatatcttatc
cacaatttgaactacctcccatttcctgccatacaacagtacaagtatctgcgcttcaga
agatctcttccactactggcaaaacatagttgtgtggagtcattttatatggttaggaac
ttctgtgctgtttattacttctttggttacattccaaggacatggataatgaccacaatg
aacattcagcctgatagcaatcttcctcttctagatacagtgactggtctcctggatttg
tctcttctgtatcatagctggttatgtggtctgtttctactcatgacttggtacatcgca
tggcttctcttcagaattttttcaaccgaggcacaccactttccagtccagccaaccttt
gcagaagaagcagaccagtgtttacctaaaatcttaaacagcaaccctccacccctttta
aagtttttagctttacaggacctgatgtttctttctcaatattcttctgtgcgtcgtcaa
gcggtctttagcctcagccaaccaggtggacatccatacaactggacttcaatttgcggg
gagtgtttgaatcttctaagtgaactgacacaaaagctgataatccagcaagagattgca
gctgcaaatggaagaatgaaacagccatccccaggagacttgacacagtccttcagctct
ccagctcctgaagaaagctcatttcagacgccaaggaccggcatatttcctccagcccac
atgcattccctggttaaatcgtctctgttgcccttaaaaacatcacctgcatctgacctt
ggaagcaatttaggatcaccttttaatacttcccttttgggtcataagcctggactgttg
gagttaaactctccttggcatggatctgtccaaagtccccatattatgagaagaggacca
aaactatggacatcaagttcagatctgcaattgacaggctatcctgatgaacctcgccca
atggtggtggttgcaaaagatgctaaggaagcagcacagccaggttctttctatatatgg
ttgcagaacaagaaagagcagatcaaaaatttcctgtcaaaacgagtcctgataatgtat
tttttcaacaagcaccctgaagcatcaatccaagcattattttcagatacccaaatgcat
atttgggctttggaaggtttatcgcatcttgtagcagcctcatttactgaagatagatat
ggtgttgttcagacaacattgccagcaattctgaattccttgctaactcttcaggaggtt
atagacaaacacttcaaacttcctcatgtgtccagcaaacctccaaaaacttcaggaaat
cttgcagacacttcctacaagacccttcgatttgctttgagatcatcattaaaaactgca
atctatcggataaccactacctttggagaacatttaaatgcagtgcaagtatcttcagaa
cataagaaaagactgcagcagttcttggagttcaaagaatag
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