Crotalus tigris (Tiger rattlesnake): 120297742
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Entry
120297742 CDS
T08476
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120297742 (BDP1)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120297742 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
DUF6123
Motif
Other DBs
NCBI-GeneID:
120297742
NCBI-ProteinID:
XP_039176668
LinkDB
All DBs
Position
Unknown
AA seq
2346 aa
AA seq
DB search
MFRRARFSVKPNVRPNAAGRSGHSGGSTSSVIPAVAASAATADADSQHDSTPTTWSSTAE
DNSVPHPGDDATASEDLHLSGDSNNSIGNEKTSDKSGDGDCRKNAEGFPQRRKRISTMPN
LIKPKIVPPPIQPTVDSSSKCSLKQGPHSPAFSNVLFQKETSLLEKIDVESSPKSSILPE
KKTSAPQVPQFSPFKKSASKEPNMCMPAQRNDEALLKNTSSPLKERPTQEILMEEETTQT
KSASTNKKRICSDREKIIKSQKLRKMLKEELKKEKKQLKFKYPVIEKNTPEDRSKMMMRD
FIYYLPENNPMKSSLIEEKKTEKTSTMTQAKEPEEKNVADHEDENEEEEDEEQAGGGGGK
EDGSFLVPRVKVAEDGSIILDEESLTVEVLRTKGQCVVEENDPIFECGSSTTYSSFRKSY
YTRPWSEKETDMFFLAISMVGTDFSMISQLFPHRARTEIKNKFKREEKVNGWRIDKAFKE
KRPFDFSFFTKLLEKILENERKKKDKVVACQHQKEKNVNKRNTPRSQKKRKDKVVNGQSN
HGPDDHQDDRSSDMEIEVDAETAEKENEESPSILEQAKEQTVIESAVTKKKRKRKKKDTE
QETDNLLEERIIPAEMMEEKRTRKKRENILANDEISGTGEVGDELEVPNRTISDEILITD
KEEPPCCIRLNEEAGKDHSIQKSKPGQEDASSLNSEYHVDQHSVSQMTPKENIEDFEKST
EAKNEVAVRDKLDKNQNMASQNCGQEIMETDRAIPEKPTQEVQLQNFESDLTGASEKTEP
LASNPLIVKVSSESLVQNKAASISGFATEVTCNESSDVIRVTEESQKAFVGKMEVRGRWT
RPKPNIGKVFGRKEASAQGKLNKSGSDSAVEKENEQNDAPGIITAEITETRCQGLDSEST
NKNQSTSQESSKQTAVKPTPLARGRFQRPKPNLGRVARRQELPGRSTETEKRTSEAGTEL
ASEAVITEKTVMQTECNACQLLSNNAIDTTAHEADTECDALENRTVVSTEKVGAAHPKQS
PLKKPIEYERETLRNASLSLDITKDVINPDSRDSSIQEEKKDNGVEIEHSLKISPSRCKK
NLENASYREELLNTIRPQLDTAEKSESECSEASNLSEAIKSKTLPSLEECPINAQEEVAT
NETHLSLQNLSGVKNDVSNEISLESDTQKKEFVGKQRTQGESEHSDTRSTPFLRGRFQRP
KPNIGGIIGRKEKRSLKGNELTTTGNPELQKSEPTNPSMTQINDKILSDEDLQSRLEDSE
KVIQKNSPVPGTCQNSSDLRLREKSNFQEDKSSTIKPAQLLRGRFQRAILNVGRSNCKKE
VPVSEDISVPIVEEVKEMEISKKDDLNITFEDEVIIQASPDNLDKKEGSETSRCIDQTKH
PSEKSLADGLLKNQDDVERKNLDALGSDTFDPQEINHSENKKPALLMINHLQKVKPNVAQ
VPQNTESSLERENSKGDTGRDAECDASYSSKFGKTTRLMGSSVYLMESASTSESRIEKKC
TENIELVSLTRRRHSGKHGSSDQPSENETQIKKEIPKLLSVQEKEVENLKGKQSGRTLKQ
RNKNYDSKTSSTSECENDHCRKMKYQQKVKPHVSKGKNLKLVPRKKSRNGSSKINLVTLR
ASSQEDDDEEEEDEPESEYEVEIFSPEEVNKAPVFVPKGLRSPNPVPMHIEETMEELEIY
ENVADEPCISHDLNLSIQPGMQDDSKLYFSTVDITQEEQTKETGINDGSTEAAMTLLAMR
DPVFQLRTDIQGKEVQMVVPSTNEPIHSNNTNNTEGNGSKPSYSEECLEEKTVVLLPDLS
KTALVSLHKTNKTTADLENSSQETRICSTVSLCKRNKTPRPARYRLPKPKPNLNGGLVST
RNVSQKPLTLSLGMEEYKEIQNVTDDRMPEKPREEQKVEMNLHMDDQLAKISTMGKYELH
SESAGPTMQENNMESGNPIQEIYEIASELTSPTCSQEAVACLSELPDNLNIKSNVHAFGS
AEHQFSTAEVAQTEGNKNASISVMTEMSIDFVDAEEEPEFILTLVEISPDSVECNSVPAA
LSHGSGELLPPPILFTSDNMDSLELTRDVSVGSIQASVEENAASVTDPTGRELHPSSSEQ
LVDLGLASWKNRKRSSVSIEGSSVSEKTSHTAPIEEYLESSDKGTSLKLQHTPRKAAELQ
VEEKEQPQSSLNVGTVLLGETDSEAGIVSRMPGAGKPETNKEQRFCVAYSSEQSDQVRNT
DALPKTSLPRSYQRSLGFLSLICKINPDEVAAKENSKPLQKTCTSISENTTECPASTFKD
NNKEIQEYSSLPTTLLSPSKYESGSCSSVQVLPEEEGLAKEQEKEESIKISEYFFSDIFM
EVDDSE
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccgcgccaggtttagcgtgaagcccaatgtacggccgaatgctgcagggaga
agcggccatagtggaggcagcacaagctcagttatcccggcggtggccgcctccgccgcc
accgctgatgccgacagccaacatgactcgacaccgaccacctggtcttctacggccgag
gataattcggtgccccatcccggtgatgatgctaccgcctctgaagatcttcacctgagc
ggggacagtaacaacagtatcggaaatgaaaagaccagtgataaaagtggagatggagat
tgcaggaaaaatgcagaaggatttccacagagaagaaaacggatatccactatgcctaat
cttataaaaccaaaaattgtacctccgcctatacaacccactgttgattcgtcatcaaaa
tgctctctaaaacaaggacctcactctcctgcttttagtaatgttttgtttcaaaaagaa
acatctttacttgaaaagatcgatgtagaaagttctcccaagtcttccatattgcccgaa
aagaaaacttctgctcctcaagtgccacagttctctccatttaaaaaatctgctagtaaa
gaacctaacatgtgtatgcctgctcaaagaaacgatgaagctctcctgaagaacacaagc
tcgcccctcaaagaaagacccacccaagaaatattgatggaagaggaaacaacgcagaca
aaatctgcttcaacgaataaaaaaaggatttgttcagatcgtgagaaaattatcaaaagt
cagaagctaaggaagatgcttaaagaagaattgaagaaagagaaaaaacaactgaaattt
aaatatccagtaattgaaaaaaatacgccagaagatcgctccaaaatgatgatgagagat
tttatttattatttgcctgaaaataatcctatgaagtcttcattgattgaagagaagaaa
acagaaaagacttctacaatgacgcaagcaaaagagcctgaagaaaaaaatgttgctgat
catgaagatgaaaatgaagaagaagaagatgaagaacaggcaggaggaggaggggggaaa
gaagatggctcttttttagtccctcgagtgaaagttgcagaagatggctcaattattctg
gatgaagaaagtttaactgtagaggttttaaggacaaaaggacagtgtgtggtggaagaa
aatgaccccatctttgagtgtggttcctcaacaacatattcaagcttcaggaaaagctat
tatactagaccctggtcagaaaaagaaacagacatgtttttcttagctataagtatggta
ggaactgacttttcgatgattagtcagctttttcctcacagagcaagaacagaaatcaag
aataaatttaagcgggaagaaaaagtcaatggatggagaatagataaagcatttaaagaa
aaaagaccttttgacttcagtttttttacgaaactccttgagaagatcttggaaaatgag
aggaagaagaaagataaagttgtggcatgtcagcatcaaaaagaaaaaaatgttaacaag
agaaatacaccaagatctcagaaaaagcgaaaagataaagttgtaaatggacagtctaat
catggtccggatgaccatcaggatgatagaagttctgacatggaaatagaagtagatgct
gaaacagctgaaaaggagaatgaagaatctcctagcattttggaacaggcaaaagagcaa
acagttattgaatcagcagtgacaaaaaagaaaagaaagagaaagaaaaaagatactgaa
caggagacagacaatcttcttgaagaaagaattattccagcagaaatgatggaagaaaaa
aggactagaaagaaaagggaaaatatattggctaacgatgagataagtggcactggggaa
gttggtgatgaactggaagtccccaacagaacaatctctgatgaaattcttatcacggat
aaagaagaaccaccatgctgtatcagattaaatgaagaggcgggaaaagaccacagtatt
caaaaaagtaaaccaggacaggaggatgcttcatcacttaattctgaataccatgtagac
cagcattcggtgtctcaaatgactccaaaagaaaatatagaagattttgaaaagtccact
gaagccaagaatgaagtagctgtaagagataaactggataaaaatcagaatatggcatca
caaaattgtggtcaagaaatcatggaaactgatagggcaattcctgaaaagcccacacag
gaggtgcagctgcagaactttgaatcagacttaacaggagcatctgaaaaaacagaacct
ctagcaagtaacccattaattgttaaagtttcttctgagtcacttgtacaaaataaagct
gcttccatatctggatttgctacagaggtaacatgcaatgaaagcagtgacgtcataaga
gtaacagaagagagtcaaaaagcttttgtgggaaagatggaagtgagaggtcgatggaca
agacctaaaccgaatatcggtaaagtgtttggcaggaaagaagcatctgctcaaggcaag
ctcaacaagtctgggtctgacagtgcagtagagaaggaaaatgagcagaatgatgcacct
ggcattatcacagctgagattactgaaacacgttgccagggtttggattcagaatctacg
aataagaaccaatccacttcacaagaaagtagcaagcaaactgctgttaagcctacacca
ttagcaaggggacgatttcagagaccaaaaccaaatttaggaagggttgctagaaggcaa
gaactacctggaagaagcactgaaacagaaaaaagaacaagtgaagcagggactgaatta
gcaagtgaagcagtaatcactgaaaagactgtgatgcaaactgaatgtaatgcttgtcaa
cttctaagtaacaatgccattgatacaacagctcatgaagctgacacagagtgtgatgca
ctagaaaacagaacagttgtcagcactgagaaagtaggtgcagcacacccaaagcaatct
cctctgaagaagccaatagagtatgaaagagaaacactaaggaatgcctccctgtcactt
gatattacaaaggatgtgataaatcctgacagcagagattccagtattcaggaagaaaaa
aaagataatggtgttgaaatagagcactcattgaagatttctccatcaagatgtaagaag
aacttagaaaatgcatcatatagagaagaattgttaaacacaataagacctcaattggac
actgcagaaaagagtgaaagtgaatgcagtgaggcctctaatctaagtgaagcaataaaa
tctaaaaccttaccatctttagaggaatgtcctatcaatgcccaagaggaggttgcaacc
aatgaaacccatttgtctctccagaatctttcaggagttaagaatgatgtatcaaatgag
atttcactggaatctgatacccagaaaaaagaatttgttggcaaacagaggacacaggga
gaaagcgaacatagtgatactcgatcaacaccatttctcagaggcaggttccagagaccc
aaacctaacattggaggcataattggaaggaaagaaaagagatccttgaaaggaaatgaa
ttaacaaccactggaaatccagaactccaaaaatctgaacctaccaatccatcaatgact
cagatcaacgataaaattttatctgatgaagacttgcagagtagactagaagactctgag
aaagtaattcagaaaaattctccagtgcctggtacttgtcagaatagctccgatctacgt
ctcagagaaaaatccaatttccaagaagataagtcatctacaatcaagcctgctcagttg
ctaagagggcgattccagagagccatattgaatgttggaagaagcaattgcaaaaaggaa
gtgcctgtgtcagaagatattagtgttccaattgtggaagaagtaaaagagatggagatt
agcaagaaagatgatctaaatataacttttgaggatgaagttattatccaagcatcccca
gataatttagataaaaaagaaggatcagaaacctcaagatgtattgatcagacaaaacat
ccttctgagaaatcactggcagatggtcttctgaaaaaccaagatgacgttgaaagaaaa
aatttggatgctcttggaagtgatacttttgatcctcaagaaataaatcattcagaaaac
aaaaaaccagccctgctcatgataaatcatctgcagaaggtaaagccaaatgtggcacaa
gttccccaaaacacagaatcttccttagaaagagaaaatagcaaaggagatacaggaaga
gatgcagaatgtgatgcctcatacagtagcaaatttggaaaaacaactcggttaatgggc
agctcagtatatttgatggaatctgcatcaacttctgaatcaaggatagaaaaaaaatgt
acagaaaacattgaattagtatccttaacaagaagaaggcactctgggaaacatggttca
tcagaccagccttcagagaatgaaactcaaattaaaaaagaaatccctaagctgctttct
gtccaagagaaagaagtagaaaacctaaaaggaaagcaatcaggaagaacactaaagcag
aggaacaaaaactatgattcaaaaacatcttccacttctgaatgtgaaaatgaccattgt
aggaaaatgaagtaccaacaaaaagttaaaccacatgtcagcaaaggcaaaaatttaaaa
ctagtccctcgcaaaaaatcaagaaatggaagttctaaaattaatttggtaacccttaga
gcttcttcacaagaagatgacgatgaggaggaggaagatgaacctgaatcagaatatgaa
gttgaaattttttcaccagaagaagtaaataaagctcctgtgtttgttcctaaagggctt
cgatctccaaatcctgttcctatgcacattgaagaaacaatggaagagttggagatatat
gagaatgttgcagatgagccatgtatctctcatgatctaaatctgtctattcagcctggg
atgcaagatgatagcaaattgtatttctcaacagttgatattacacaagaagaacaaaca
aaagaaacaggaattaatgatggaagtactgaagcagccatgactttacttgctatgagg
gatccagtgtttcagttacgtactgatatccaaggaaaagaagtacaaatggtagtccct
tcaacaaatgaacctattcattcaaataatacaaataatacagaaggtaacggcagtaaa
ccatcgtattctgaagaatgcttggaagaaaagacagttgtgttacttccagacttgtca
aaaactgcactggtttcactacacaagacaaataaaactactgcagatttggaaaattct
tcacaggaaactagaatctgcagtactgtatctttgtgtaaaagaaataaaacacccagg
ccagcaagatacagactcccaaagcctaaaccaaatcttaacggtggcttagtatcaacc
aggaatgtttctcaaaaacctctgactctaagtttaggaatggaagaatataaagaaatc
caaaatgtaacagatgacagaatgccagaaaaacctagagaagagcagaaagttgaaatg
aatctccacatggatgaccagcttgctaaaatcagcactatgggaaaatatgagttacat
tctgaaagtgctggccccaccatgcaggaaaataatatggaaagtggaaacccaatacaa
gagatttatgaaattgcatctgaattaacatctccaacatgttctcaagaagcagtagct
tgtttatctgaactaccagataatcttaacataaagagtaatgtccacgcttttgggtct
gctgaacaccagttttctacagctgaagttgctcaaactgaaggaaacaagaatgccagc
atttcagtaatgacagagatgagtatagattttgtagatgcagaggaagagccagagttc
attttaacactggtggaaatctcgcctgattctgtggaatgtaatagtgtccctgctgcg
ctttcacatggttctggggaattgcttcctccaccgatacttttcacctcagataatatg
gactcattggaactgacaagagatgtaagtgttggatccatccaggcttcagttgaagaa
aatgctgcttctgtcacagaccctacagggagagaattgcatccgtcttcatcagaacaa
ttagtagatttgggtttggcctcttggaaaaatcggaaaaggtcttcagtatctatagaa
ggaagtagtgtttctgagaagacaagtcatactgctcctatagaagaatacctggaaagc
tctgataaggggacctctcttaaattacagcatacaccaagaaaggctgctgagttacaa
gtggaggaaaaagagcagcctcagtcttctctgaatgtagggacagtgttgcttggtgaa
acagatagtgaggctggaatcgtgtcaagaatgcctggtgctggaaaacccgaaacaaac
aaagaacaaagattctgtgtagcttacagttctgaacagtcagaccaagttagaaataca
gacgcccttccaaaaacatcattacccaggtcatatcaaagatctctgggatttctatct
ttaatctgtaaaattaatcctgatgaagtagctgctaaagagaacagcaaacctctgcag
aaaacctgtacatcaatttctgaaaataccactgaatgtccagcttcaactttcaaagac
aataacaaagagattcaggaatatagttcacttccaacaaccctgttgtcaccttcaaaa
tatgagagtggaagctgttcttctgttcaggttttacctgaggaagagggcttggctaaa
gagcaagaaaaagaagagtcaataaagatctcagaatatttctttagtgatatttttatg
gaggtagatgattcagaataa
DBGET
integrated database retrieval system
