Crotalus tigris (Tiger rattlesnake): 120297839
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Entry
120297839 CDS
T08476
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120297839 (VSX1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120297839 (VSX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120297839
NCBI-ProteinID:
XP_039176877
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MTGREELSEGKAKGSALAPSSACGHEKARLGGPTGGGLRSKGFAITDLLGLEAELQPSAC
SSCEGGGPAAGRGGGGPPLPLGLGFLCSFATQQHAGAPRLLPAHLPFLQPRSEHQHPRYG
PEVEKPKLTISDEDSLSGEKNNLKTSDSQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPD
VYSREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPE
SIINSAKSGMVGSCAPWLLGMHKKSINIIRKPENEEKGNGSWKSEHPEEEFIIKQTEYER
NPTNKLISTDSSEDIAIDLSSTAKQEKKISNLSFGGSPQPKMKDAEH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccgcgaggagctctcggagggcaaagccaagggaagcgcgctggcgcccagc
agcgcctgtggccacgagaaagcgcgcttggggggcccgaccggcggcggcttgcgctcc
aagggcttcgccatcacagacctcctgggcttggaggcggagctacagccgtcggcttgc
tcgagctgcgaaggcggtgggccagctgcggggcgaggaggaggaggccctcccttgccg
ctgggcttgggcttcctgtgcagttttgccacccagcagcacgcgggggcacctcgtctc
ctgcccgcgcacctccccttcctccagcctcgctcggagcaccagcacccccggtacggg
ccggaagtcgagaagcccaagttgaccatctccgatgaagatagtttatcaggagaaaag
aacaacctgaagacatctgactctcagatcaagagaaaaaaacggcggcacaggactgtg
ttcactgcccatcagttggaggaattggaaaaagcatttaatgaagctcattaccctgat
gtatattccagagaaatgttagcaatgaaaactgaattgcctgaggatagaatacaggtt
tggtttcaaaaccgaagagccaagtggcggaagcgtgagaaatgttggggccgcagtagt
gtgatggccgaatatggtctctacggtgccatggtgaggcactccatcccacttccagaa
tcaattatcaattctgccaaaagtggaatggttggttcctgtgccccttggttgttggga
atgcataaaaaatcaataaatattataagaaagcctgagaacgaggaaaaaggaaatggc
agctggaaatctgaacatcctgaggaggaattcataattaagcagacagaatatgaacga
aaccccactaataaattaatctcaacggacagttcagaagatattgcaattgatctttct
agtacggcaaagcaggaaaaaaagatcagcaatctgagttttggtgggagcccacagccc
aaaatgaaagatgctgaacactaa
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