Crotalus tigris (Tiger rattlesnake): 120297869 Help Entry 120297869         CDS       T08476                                  Symbol COL24A1 Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120297869 (COL24A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120297869 (COL24A1) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120297869 (COL24A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  120297869 NCBI-ProteinID:  XP_039176939 LinkDB All DBs Position Unknown AA seq 1725 aa AA seqDB search MHLGAQRTRSGSISPTAQTKKIFMIILPFNHQKSKSDVQKTLLLLTLCIAVGCVQRQQEG IDVLHHLGLSGQATHHPTTGSTIHLSRASSPQGVHLTAFGVLLSTQSAIEVPISQVRASG LGSNFAILISLRSYGVNNAFLFSVRNKNRLQFGVQLLPKKIMVHTGGKHSVYFDYRVHDE QWHTFAIDVTEKSVSLYTQCGRKHFSKEILSKVQFDSHSLFTLGRMNSQSVNFEGVLCQL DIIPSAQALTNYCQYVKLQCRQADTYRSHTISPSEVISSKLLDEVTQPLSKRKGTLNLHV SKSALVQDPQELKETTSSLTPLYLGNITALSEPNDQQTVNVSKEHQHLVSKRKGDSLHLT KLILNHTDFVTENIKRKTNSSFLLYIKQPNAKHMMKNTSKPYLYELMDTQHFLNTTLHED FHSEPLINRFGSLDEHTVRIDEIYNAEGNYEFDADYYDYDYEEWERLLDMENLKGPKGDP GQVGPPGPPGLPGPAGKRGPRGIPGPHGNPGLPGWPGPKGPKGDPGFSPGQAKRGEKGDA GLTGLPGIEGLKGEKGLVGYSGQRGMQGEQGILGMTGNPGAFGYPGRQGLTGPEGNPGPK GVRGFIGPPGVAGNPGPEGERGIPGLPGKRGIKGRIGLPGDFGNRGLPGPDGSPGNVGGV GPPGFPGLRGIVGKAGPSGLPGIPGPLGLPGSMGQPGLKGDKGEQGITGEQGEVGYPGDK GAVGLPGLPGNRGKPGPSGKMGDPGPQGPSGPPGPEGFPGDIGVPGPNGPEGPKVRLCQA VKVLRKMELQNILRNLHTGQEDTIWTGSSLPKEWDKAGEEGPIGPIGVTGPRGKPGRKGF AGEPGLEGLKGETGDQGVLGKTGETGPIGSSGEIGQSGGPGEKGDRGNPGPVGPPGEKGL MGYSGPPGGSGDVGPQGLPGPPGARGPPGPQGSKGQRGPRGLDGPLGEQGTEGIKGEAGD AGKKGIPGLIGKAGIPGERGSPGAPGLPGLSGSTGDRGPSGEPGPRGEQGDAGPVGEAGF EGSPGPEGEPGPNGEPGTKGDSGPIGNIGAPGEQGVRGIRGPPGEDGVQGKDGSKGSLGD PGLPGEDGEKGKIGIPGLIGPPGEPGIRGIPGPEGNQGSPGQRGRSGKKGEKGQHGFPGE IGAMGEPGKLGEIGPKGSRGTRGPVGHLGAMGSAGKPGIPGYRGHQGPMGALGPPGPKGE KGYPGEDSSMLGPPGPLGEPGPTGERGERGEPGDIGYMGHPGLPGLRGAVGQQGPPGEPG EQGEQGLKGERGSRGPIGKKGSSGQPGKPGTPGEPGPVGQKGVAGNPGSEGIPGNPGKPG LSGQQGLPGTRGSPGLAGLAGYPGTHGRKGSPGVPGSPGLPGLKGEQGLQGHLGKQGRRG FPGTQGDQGRPGLPGQKGLAGEFGDQGLMGFQGFPGPKGPEGDHGLIGILGPKGPIGEIG NTGPVGYEGIVGPAGRPGPRGEKGSRGEIGPQGPRGHPGLPGPPGGPGPRKQIDMSATIQ ALIESNAALEMENYQNTEVTFLDHSAKIFKTLHYLSNLLHSIKNPLGTRDNPARICRDLL NCERKVSNGKYWIDPNIGCPSDAIEVFCNFTAGGQTCLSSVSVTKLEFNIGKVQMNFLHL LSSEATHTITVHCLNTPVWKTNELHDQKPSLIFKGWNGDIFEANTLLEPKVLMDECMIQD GNWHKTQFFFHTQDTNQLPVLQVHPFSHLKQGQQRYIESGFVCFL NT seq 5178 nt NT seq  +upstreamnt  +downstreamnt atgcatttaggagctcaaaggacaaggagtggaagcatctctcccacggcacaaacgaaa aaaatattcatgatcatattacccttcaatcatcaaaaaagcaagtctgatgttcagaag acccttctccttcttacactatgtatagctgtgggttgtgtgcaaagacagcaagaaggc atagatgttctccatcatttaggcctaagtgggcaagccacgcatcatccaacaacaggg tctacgatacatttgtcacgtgcttcatcacctcaaggggttcacctaactgcatttgga gtccttttatccactcagtcagccattgaagttcccatctctcaagtgagagcgtcaggc ttaggttccaattttgccatactaattagtttacgctcttatggagtaaacaatgccttt cttttcagtgttaggaataaaaacagactgcagtttggtgtacagttgctaccaaagaag ataatggtacacactggagggaagcactctgtatactttgattatcgggttcacgatgag cagtggcacacgtttgctattgatgttacagaaaaatcagtgtccctatatactcagtgc ggaaggaaacactttagcaaggagattctttccaaagtacagtttgattcacacagctta tttaccttaggaagaatgaattcccagtcagtcaactttgaaggtgtgttatgtcagttg gatattatcccctctgcacaagccttgacaaactattgccaatatgtgaaactacagtgt cgccaagctgatacataccgatctcatacaatttctccaagtgaggtgatctcaagcaag ctgttggatgaagtaacccaaccattaagtaaaagaaaaggtaccctaaaccttcatgtc agtaagtcagcattagtacaagatcctcaagaattgaaggaaacaacttcttctttgact cctctttacttagggaatattactgccttgtcagaaccaaatgaccagcaaactgtgaat gtctccaaagaacatcaacatcttgtcagcaaaaggaaaggtgattccttgcatctcaca aaattaattttaaatcatacagactttgtgacagaaaatataaaaagaaaaaccaattcc agttttctgctttacataaagcagcctaatgccaaacatatgatgaaaaatacatcaaag ccatatttatatgaactaatggatacacaacattttttaaatacaacattgcatgaggat ttccattctgaacctttaattaaccggtttggctcattggatgagcatacagttcggatt gatgagatttataatgcagaaggcaattatgaatttgatgctgattattatgattatgat tatgaagaatgggagagactacttgacatggaaaatcttaaggggcctaaaggagatcct ggacaggtgggacccccaggtcctccaggattacctggcccagcaggaaagcgtggccca agaggtattccaggcccacatggaaaccctgggctgccaggttggcctggtccaaagggc ccaaaaggtgatccagggttttccccaggacaagcaaagcgcggagaaaaaggtgatgca ggattaacagggttacctggcatagagggtctcaaaggtgaaaagggtttagtgggatat tcaggacaaagagggatgcaaggggaacaaggaattctaggaatgactggcaaccctggg gcttttggttaccctggcaggcagggtttaacaggacccgaaggtaacccaggccctaaa ggtgtaagaggtttcattggacctccgggagtggctgggaatcctggacctgagggagaa agaggtattccaggcttacctggaaaaagaggtataaaagggagaataggattgccaggt gattttggaaacagaggtcttcctggtcctgatggaagtcctggaaatgttggtggtgtt ggtcctcctggatttcctggacttagaggtattgtgggaaaagctggaccatctggactt cctgggattcctggacctctgggtcttccaggtagtatggggcaacctggattgaaaggt gataagggtgaacaaggcattacaggagagcaaggagaggtggggtatccaggagacaag ggtgctgttggtttgccagggcttccaggaaatagaggaaaaccaggaccctcgggcaaa atgggagatccaggaccccaggggccatcaggcccacccggaccagagggttttccagga gatattggtgtaccaggtccaaacggtccagaaggcccaaaggttagattatgtcaagct gtaaaagtactcaggaaaatggaactccagaatatcttgagaaacttacatacaggtcag gaagacacaatatggactggttccagtttgccaaaggagtgggacaaggctggagaagaa ggacccattgggccaattggagtaactggaccaagggggaaacctggaaggaaaggtttt gcaggtgaaccaggactagaaggcctgaagggagaaacaggagaccaaggagttctcggg aaaactggtgaaacaggacctattggctcatctggtgaaattggacaatctggaggacct ggtgagaagggagacagaggtaatccaggcccagtgggccctcctggagaaaaaggtctc atgggttattcaggtccaccaggtggttctggtgatgtagggccacagggactacctggc cctccaggagcacgaggacctcctggaccacagggtagtaaaggtcaaagaggaccacga ggcctagatggtcctctgggagagcaagggacagaaggtattaagggagaagctggtgat gctgggaaaaaaggcattcctggactcattgggaaagctggaatccctggagaaagaggc agtccaggggcaccaggtttgcctggcctttctggaagtacgggagatagaggtccttcg ggtgaaccaggaccaaggggagaacaaggtgatgctggtcctgtaggtgaagctggcttt gagggatcacctggcccagagggagagccaggaccaaatggagaaccaggcacaaaggga gattctggaccaattggcaatattggagcaccaggtgaacaaggtgtaagaggtattcga ggaccaccaggagaagatggtgttcaaggaaaagatggatcaaagggcagtttaggagac cctggccttcctggagaagatggtgaaaaaggaaaaattggaattccagggcttattggc cctccaggtgaacctggaatcagaggcattccaggtcctgaaggaaatcaaggaagtcca ggtcaaagaggtcgttcaggaaaaaagggggaaaagggtcaacatggtttcccaggagaa atcggagctatgggtgaacctggcaagcttggtgaaattggaccaaagggttcaagagga actagaggaccagtgggacatttaggagcaatgggatcagcaggaaaaccaggaattcca ggttataggggtcaccaaggtccgatgggagcacttggccctccaggacccaaaggagag aaaggttaccctggggaagacagctcaatgctaggaccacctgggcccctaggtgaacca ggtcctactggtgaacggggagagagaggagaacctggtgacataggttacatgggtcac cccggactcccaggacttagaggtgctgttggacaacaagggccaccaggtgaaccaggc gaacagggagagcaagggctaaaaggagaaagaggatctcgaggtcctattggaaaaaaa ggatcaagtggtcagcctgggaaacctggaacgcctggagaacctggtcctgttggtcag aaaggtgtagctggcaaccctggatcagaaggtattcctggaaatcctggaaaaccgggg ttatctggacagcagggccttcctggtaccagaggaagcccaggactagctggactagca ggatatcctggaactcatggacgtaaaggttcaccaggtgtgccaggaagccctggcctg ccaggattaaagggtgaacaagggcttcagggacatctaggaaagcaaggtagaagagga tttccagggacacaaggtgatcaaggccgaccaggacttcctggccagaaaggactcgcc ggagaatttggagatcaaggtttgatgggatttcaagggtttccaggtcccaagggccct gaaggtgatcatggtttaattggaattttgggacctaaaggcccaataggtgaaatagga aacacaggccctgtaggttacgaaggtattgttggtccagctggcagacctggacccagg ggggaaaagggatccagaggtgaaattggccctcaaggaccccgcggtcacccaggtcta cccggtccaccaggaggacctggacccagaaaacaaatagacatgagtgccactattcaa gccttgattgaatcaaatgctgccttagaaatggagaattatcagaacactgaagtgaca ttcttggaccacagtgccaaaatattcaaaacactacattatctgagcaatttactccat agcatcaaaaacccactgggaacccgagataatccagcacgtatctgcagagatttgctc aactgcgaacgtaaagtatccaatggaaaatattggattgatccaaatattgggtgccct tcagatgctattgaggttttctgcaacttcactgctggtggccagacatgtttatcatct gtatctgtcacaaagttggaatttaacattggaaaagtacagatgaacttccttcattta cttagttcagaagcaacccacactattacagttcactgcctaaataccccagtgtggaaa actaatgaactacatgatcagaaaccttccctgatcttcaaaggatggaatggtgatatt tttgaagcaaatacgctgcttgaaccaaaagttcttatggatgaatgcatgattcaagat ggcaactggcataagactcaattttttttccacactcaagacaccaatcaactaccagtt cttcaggttcatccattttctcatctcaaacaaggacaacagcgatacatagaaagtggc tttgtgtgctttctctaa

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