Crotalus tigris (Tiger rattlesnake): 120297963
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Entry
120297963 CDS
T08476
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120297963 (VPS53)
Membrane trafficking [BR:
ctig04131
]
Protein recycling
Others
EARP complex
120297963 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
120297963 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
Syndetin_C
FBF1
TPR_CAND1
Sec8_N
GrpE
hAT-like_RNase-H
COG3_N
Tropomyosin
PsaD
COG5_N
WHD_1st_NFRKB
NBD94
XhlA
FUSC
Seryl_tRNA_N
MCPsignal
Motif
Other DBs
NCBI-GeneID:
120297963
NCBI-ProteinID:
XP_039177171
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MEDEELDLAYDLEAALQLAPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DDVVNKIRMKIRRLDDNIRMVVRAQTNVGQDGREALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGELANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPAQGTKQRSAGPSNVLRD
ACLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPAEWCMTERIAVDFCHITRTELGKIMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLSETVTKKPDPPPASTNPFLEEESATDEDETPSEKADIDKPQKPKIPSNPFHGI
VSKCFEPHLYVYIESQDRNLGELIDRFVGDFKAQGPPKPNVDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTNTSGGGLTITSLLKEKDGS
EVAKFTLDELCLICSILSTAEYCLATTQQLEEKLKEKVDDSLVERITLMGEMDTFSTVIS
SSIQLLVQDLDGACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLAST
RKYFTQFCIKFANCFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVR
KAPASYTKIVVKGMTRAEMILKVVMAPHEPAVVFVDNYIKLLSDCTTDTFQKILEMKGLK
RSEQSSMLDLFRQRLPALPSGAETGGCISLTTPTPEQESSRIRKLEKLIKKRL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagagctcgacttggcctacgacctggaggccgccttgcagctggcgccg
gaggtgcagctggccattgagcaggtatttcccagccaagatccactggacagggctgat
ttcaacgcagtggaatacatcaatactctttttccaactgagcaatctttggccaatatc
gatgacgtagtgaacaaaatcaggatgaaaataagacgattggatgataatattcggatg
gtggtgagggcccagaccaacgtggggcaagatggccgcgaggctcttgaagaggcccag
aaagccatccagcagctttttggtaagataaaagacattaaggataaagcagaaaaatcg
gagcagatggttaaagaaatcactcgggatatcaagcagctggaccacgctaaacgccac
ttgaccacctccatcaccaccctgaaccacctccacatgttagctgggggagtggattca
ctggaggctatgaccaggaggagacaatacggggagctggccaaccttctacaaggggtt
gtgaacgtgctggaacatttcaacaaatatatggggatcccgcagatccgccagctttcc
gaaagggtgaaggcagcccagaacgagctgggacaacagatcttggctgattttgaagag
gcctttcctgcccaaggcacaaagcagagatccgctggtcccagcaacgttctccgtgac
gcctgcttggtcgccaacgtcttagatccccggatcaagcaagaaatcatcaagaagttt
attaagcagcacctctcggagtatctggtgctgttccaggaaaaccaagacgttgcttgg
ctggacaagatcgaccggcgttatgcctggatcaagcgccagttggtagactacgaggaa
aaatacggccggatgttcccagcggaatggtgcatgacagagcggatcgccgtggatttc
tgtcatattacaaggacagagctggggaaaatcatgcgcacccgggcaagggagatcgag
gtgaaactgctgcttttcgccatccagagaaccaccaacttcgaaggattgctggccaaa
cgcttctcgggttccaccttgtcagagacggtgacgaaaaaacccgatcctccgccagcc
tccaccaacccttttctggaggaagaatctgcgaccgatgaggatgaaaccccgtcggaa
aaggccgatattgacaagccacaaaagccaaaaattccaagcaatccattccatggaatt
gtttctaagtgctttgagccacacctgtatgtctacattgaatctcaggacagaaacctc
ggagagctgattgaccgcttcgtgggggacttcaaagcccagggaccccccaagccgaac
gtggacgagggcggtgccgttctgcccagctgcgctgacctctttgtctattataagaag
tgcatggtccaatgctcgcagctgagcaccggggagcccatgattgccctcaccaccata
ttccagaaatatctgcgggaatacgcctggaagattctctccggaaatttacccaagacc
acgaacaccagtggcggcggcctgaccatcaccagcttactaaaggagaaagatggttcg
gaggtggctaaatttaccttagacgagctttgcctaatctgtagcattctgagcacggcc
gaatactgcttggcgaccactcaacagcttgaagaaaaactcaaggagaaggtggatgac
agcttggttgaaagaatcaccctgatgggagagatggataccttcagcacagtgatttcc
agcagcatccagcttctggtgcaggatttggatggagcttgtgatccagccctcactgcc
atgagcaaaatgcagtggcaaaacgtggagcacgtcggggatcagagtccctacgtcacc
tcggtcatcttgcacattaagcagaacgtccccatcatccgcgacaacctggcctccacg
cggaaatatttcacccagttctgcatcaaatttgctaactgtttcatccccaagtttatt
aaccaccttttcaagtgcaagccgatcagcatggtgggggccgaacagctgctgctggac
actcactccctgaaaatggtcctgcttgatttgccatccatcggctcgcaggtggtgagg
aaggctcccgccagctacacaaagatcgtggtcaagggcatgacgcgggccgagatgatc
ctcaaggtcgtgatggccccccatgagcccgctgtggtctttgtggacaactacatcaaa
ctcctctccgactgcaccacggacacattccagaagattctggagatgaagggtctcaag
cgaagcgagcaaagcagcatgttggacttattccgtcagaggctcccggcgcttccctcg
ggcgcggaaactggtggctgcatctccctgacaacccccacgcccgagcaggaatcttcc
cgcatccgcaaactggaaaaactgatcaagaagagactctag
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