Crotalus tigris (Tiger rattlesnake): 120298014
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Entry
120298014 CDS
T08476
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120298014 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120298014 (TRPV1)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120298014 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120298014
NCBI-ProteinID:
XP_039177264
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All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSSILGKMRKLGSSDLEESESTDDHTDGEDAAAGTPKGTKHGIFARRARFGIGDGDKDMA
PMDSFYHMEQLASNPIIKFSLSLERGRCGNHCPKLLSTASIGVCAGKAFKIYDRRTLFDA
VAQGDTSQLDDLLIFLLESVKNLTDAEFKEPDTGKTCLLKAMLNLHNGRNDTIPLLLEIA
EKTENLKEFVNTGYTDSYYRGQTALHIAIERRNMYLVNLLVKNGADVHARAHGEFFQKIK
GKPGFYFGELPLSLAACTNQLNIVKYLLENPYQPANIAEQDSMGNTVLHALVEIADNTVD
NTKFVTRMYNDMLILGARINPTLRLEEVTNRRGLTPLTLAAKMGKIQVFAYILRREMKEP
ECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHEMLLVEPLNQL
LQDKWDRFVKHLFYFNFFTYTVHILILTVAAYYRPTKKEGPPPFTFRHTRGEYFRVTGEI
LTVLGGAYFFFRGIKYFQQRRPSLKAIFTECYSELLFFVHSLLLLGSAVLYFSRQEVYVV
LMVFALALGWSNLLYYTRGFQQMGIYSVMLEKMMLRDLGRFIMVYLLFHLGFSTAVVTLI
EEDNEGRPETAQPLDVCPCPVRARPSYNNLYTTCLELFKFTIGMGDLEFTENYHFKSIFI
ILLLIYVVLTYILLLNMLIALMGETVNKIAQESKSIWKLQRTITILNIENSYWNCIINSF
RSGKRVLVGTTPDGKDDYRWCFRVDEVNWSTWNTNLSIINEDPGGHTEELKRNLSFSFKS
GRVSGKNWKTLVPILRDGKREGSLKPISEDYADSDEQDVRKKSLPNPVL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtattcttgggaagatgagaaagcttggtagctcagatctggaggaatctgaa
agcacggatgatcacacggacggcgaagacgctgcagcgggcacacccaaggggacgaag
cacggcatctttgcgagacgagcgcggttcgggattggcgatggtgacaaggacatggct
cccatggactccttctaccatatggagcagctggcctccaaccccatcatcaagttcagc
ctgagcttggaaagagggcggtgtgggaaccactgtcccaagctattgtccacagcatcc
atcggggtatgtgctgggaaagctttcaagatatacgaccggaggactctctttgatgcc
gtagcgcaaggagacacgagccagttggatgacttgctgatcttcttgctggaatcggta
aaaaacctgaccgatgcggagtttaaagagcccgacactggcaagacttgcctgctgaag
gccatgctcaacctccacaatggccgcaacgacaccatccctctcttgctggagattgcg
gagaagacggagaacttgaaggagtttgtgaacaccggatacacggacagctattatcgg
ggtcagacggccctccacatcgccatcgagagacgcaacatgtacctggtcaacctcttg
gtcaagaacggggcggacgtccacgcgagagcacacggggagttcttccagaagatcaag
gggaagccgggattttatttcggagagctgcccctctctctcgccgcctgcaccaaccag
ctgaacatcgtcaagtacctgctggagaacccctaccagcccgccaacatcgccgagcag
gactccatgggcaacaccgtccttcacgccctggtggagatcgccgacaacacggtcgac
aacaccaaatttgtcacccggatgtacaacgacatgctcatcctgggggcgaggatcaac
cccaccctgcggctggaggaagtcaccaaccgcagagggctgaccccgctcaccctggca
gccaagatggggaagatacaggtctttgcctacatcctccggcgggagatgaaggagccg
gaatgccgtcacctctctcgcaaattcaccgagtgggcctatggacccgtccactcctcg
ctttacgacctctccagcatcgacacctgcgagaagaactccgtcttggagatcatcgct
tacagcagcgaaaccccgaaccgccacgagatgctcctggttgaacccctcaaccagctc
ctgcaggataaatgggacagatttgtgaagcatctcttctacttcaacttcttcacctac
acggtgcacatcctgatcctcaccgtcgctgcctactacagacccaccaagaaggaagga
ccgcctccgtttacctttcgccacacgagaggcgagtatttccgggtcaccggggagatc
ctcaccgtgttaggaggcgcctacttcttcttcagagggatcaagtatttccagcagagg
cgtccctctttgaaagctatatttaccgaatgctacagtgagctgcttttcttcgtccac
tcgcttctcttgctgggctcggccgtcctctatttcagcaggcaggaagtttacgtggtg
ctgatggtctttgccctggcgctgggctggtccaacctgctgtattacacccggggcttc
caacaaatgggcatatattcagtgatgctggagaagatgatgctacgagatctgggccgt
ttcatcatggtttacctgctcttccacctgggattttccacagccgtggtgaccttgatt
gaggaagacaacgagggccgtccagagacggcccagccactggatgtctgcccgtgtccc
gtgagggcccgcccgtcctacaacaacctctacaccacctgcctggagctcttcaagttc
accatcgggatgggcgacctggagttcaccgagaactaccacttcaagtccatcttcatc
atcctcttgctgatctacgtggtcctcacctacatcctgctcctgaacatgctgatcgcc
ctgatgggcgaaaccgtcaacaagatcgcgcaggagagcaaaagtatctggaagctgcag
cgaaccatcaccattttaaacatcgagaacagctactggaattgcatcatcaactctttc
cggtccgggaagcgggttttggtggggacgaccccagatggcaaggatgattatcgctgg
tgctttcgggtggacgaggtgaattggtcaacatggaataccaacctcagcatcatcaac
gaagatcccggaggacacaccgaagagctgaaacgcaacctcagtttttctttcaaatct
ggcagagtttcagggaaaaactggaagaccttggtgccaattctaagagatggaaaacga
gagggatccctcaaaccgatttcggaggattatgctgattcagacgagcaagatgtccgg
aaaaagtcccttcccaaccctgtcttgtaa
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integrated database retrieval system
