Crotalus tigris (Tiger rattlesnake): 120298292
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Entry
120298292 CDS
T08476
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030
DNA replication
ctig03410
Base excision repair
ctig03420
Nucleotide excision repair
ctig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120298292 (RFC4)
03410 Base excision repair
120298292 (RFC4)
03420 Nucleotide excision repair
120298292 (RFC4)
03430 Mismatch repair
120298292 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120298292 (RFC4)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120298292 (RFC4)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120298292 (RFC4)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120298292 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
120298292 (RFC4)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120298292 (RFC4)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120298292 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
120298292 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_22
AAA_16
AAA_30
Mg_chelatase
AAA_11
DNAX_ATPase_lid
TIP49_C
AAA_24
Cdc6_lid
AAA_19
DUF815
AAA_14
SLFN-g3_helicase
RuvB_N
AAA_5
AAA_28
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
120298292
NCBI-ProteinID:
XP_039177816
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MQAFLKGPVSAKPLSTKERGAPATAGSSGESKKPRPSPWVEKYRPKCMDDVAFQEEVVAV
LKKSLQGVDLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIRE
KVKTFAQLTVSGNRSDGRPCPPFKIIILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YISRIIEPITSRCSKFRFKPLSDKIQCQRLLDIAKKENVIISNEAIDYLVRVAEGDLRKA
ITLLQSATRLTGGKEVTEEIVIEIAGVVPKEILDGLLSACQSGSFEKLEAVTKNVISEGY
AATQLINQLHDIIVDKEDLSDKQKSVIIEKFAETDKCLADGSDEFLQLISICAVMMQQLI
QNS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttttgaaaggtccagtcagtgctaaacctctctctactaaagaacgggga
gcccctgcaactgcaggaagcagtggggagagcaagaaacccagacccagtccttgggtt
gaaaaataccgtccaaaatgcatggatgatgttgcgtttcaagaggaagttgtggcagta
ttgaagaaatccttacagggagttgatcttcccaaccttttgttctatggccctcctgga
actgggaaaacatctactattttggcagcagctagagaactctttggtcctgaattgttc
cggcagagagtccttgaattaaatgcatctgatgaacgtggaatacaagtcattcgagag
aaagtcaagacttttgctcaattaacagtttcgggaaatcgttcagacggcagaccatgc
ccgccttttaagatcataatcctggatgaggcagattctatgacctcggcagctcaagca
gctttaaggcgcaccatggagaaggaatctaagaccacacgattctgccttatctgtaat
tacatcagccgaatcattgaaccaattacatctcgatgctccaaatttcgtttcaagcca
ctttctgacaaaatccaatgccagagacttctagacattgctaaaaaggaaaatgtgata
atcagcaatgaggcaatcgattaccttgttcgtgtggcagaaggagatttgagaaaagca
atcacgcttcttcagagtgcgacacgactgacaggcggaaaagaagtgacagaggaaatt
gttattgaaattgcaggggttgtccccaaagaaatattggatggattgctaagtgcctgt
cagagtggctcttttgaaaaactggaagctgtaacaaagaatgtgatcagcgaaggctat
gcagctactcaactgataaaccagcttcacgatatcattgttgacaaagaagacctcagt
gacaagcaaaaatctgtaattatagagaaatttgctgaaacagacaagtgcttggcagat
ggttctgatgagttcttgcagttgatcagcatctgtgcagtcatgatgcagcagctaatt
cagaatagctaa
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integrated database retrieval system