KEGG   Crotalus tigris (Tiger rattlesnake): 120298292
Entry
120298292         CDS       T08476                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030  DNA replication
ctig03410  Base excision repair
ctig03420  Nucleotide excision repair
ctig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120298292 (RFC4)
   03410 Base excision repair
    120298292 (RFC4)
   03420 Nucleotide excision repair
    120298292 (RFC4)
   03430 Mismatch repair
    120298292 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctig03032]
    120298292 (RFC4)
   03036 Chromosome and associated proteins [BR:ctig03036]
    120298292 (RFC4)
   03400 DNA repair and recombination proteins [BR:ctig03400]
    120298292 (RFC4)
DNA replication proteins [BR:ctig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120298292 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120298292 (RFC4)
Chromosome and associated proteins [BR:ctig03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120298292 (RFC4)
DNA repair and recombination proteins [BR:ctig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120298292 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120298292 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_22 AAA_16 AAA_30 Mg_chelatase AAA_11 DNAX_ATPase_lid TIP49_C AAA_24 Cdc6_lid AAA_19 DUF815 AAA_14 SLFN-g3_helicase RuvB_N AAA_5 AAA_28 ResIII AAA_7
Other DBs
NCBI-GeneID: 120298292
NCBI-ProteinID: XP_039177816
LinkDB
Position
Unknown
AA seq 363 aa
MQAFLKGPVSAKPLSTKERGAPATAGSSGESKKPRPSPWVEKYRPKCMDDVAFQEEVVAV
LKKSLQGVDLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIRE
KVKTFAQLTVSGNRSDGRPCPPFKIIILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YISRIIEPITSRCSKFRFKPLSDKIQCQRLLDIAKKENVIISNEAIDYLVRVAEGDLRKA
ITLLQSATRLTGGKEVTEEIVIEIAGVVPKEILDGLLSACQSGSFEKLEAVTKNVISEGY
AATQLINQLHDIIVDKEDLSDKQKSVIIEKFAETDKCLADGSDEFLQLISICAVMMQQLI
QNS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcaggcatttttgaaaggtccagtcagtgctaaacctctctctactaaagaacgggga
gcccctgcaactgcaggaagcagtggggagagcaagaaacccagacccagtccttgggtt
gaaaaataccgtccaaaatgcatggatgatgttgcgtttcaagaggaagttgtggcagta
ttgaagaaatccttacagggagttgatcttcccaaccttttgttctatggccctcctgga
actgggaaaacatctactattttggcagcagctagagaactctttggtcctgaattgttc
cggcagagagtccttgaattaaatgcatctgatgaacgtggaatacaagtcattcgagag
aaagtcaagacttttgctcaattaacagtttcgggaaatcgttcagacggcagaccatgc
ccgccttttaagatcataatcctggatgaggcagattctatgacctcggcagctcaagca
gctttaaggcgcaccatggagaaggaatctaagaccacacgattctgccttatctgtaat
tacatcagccgaatcattgaaccaattacatctcgatgctccaaatttcgtttcaagcca
ctttctgacaaaatccaatgccagagacttctagacattgctaaaaaggaaaatgtgata
atcagcaatgaggcaatcgattaccttgttcgtgtggcagaaggagatttgagaaaagca
atcacgcttcttcagagtgcgacacgactgacaggcggaaaagaagtgacagaggaaatt
gttattgaaattgcaggggttgtccccaaagaaatattggatggattgctaagtgcctgt
cagagtggctcttttgaaaaactggaagctgtaacaaagaatgtgatcagcgaaggctat
gcagctactcaactgataaaccagcttcacgatatcattgttgacaaagaagacctcagt
gacaagcaaaaatctgtaattatagagaaatttgctgaaacagacaagtgcttggcagat
ggttctgatgagttcttgcagttgatcagcatctgtgcagtcatgatgcagcagctaatt
cagaatagctaa

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