Crotalus tigris (Tiger rattlesnake): 120298376
Help
Entry
120298376 CDS
T08476
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120298376 (PMS1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120298376 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
PKI
HMG_box_5
IL5
Motif
Other DBs
NCBI-GeneID:
120298376
NCBI-ProteinID:
XP_039178039
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MQRNAAVAILPLNILSTVEMLEIRNPVPESQNMKQLPAETVRLLSSSQVIVSVVNVVKEL
VENSLDANATSIDVKLENYGFEKIEVRDNGDGIKAVDVPVMAMKHYTSKISSSEDLESLS
TYGFRGEALGSICSISQVSITTRTAADDFSTQYNFDISGHIISQKPSHLGTGTTVTVQKL
FKNLPVRKQFYSTDKKCKEEMKKTQKLLMAYGIIKPELRIMFTHNKTIIWQKTRVLDHKM
AFMEVVGPAVMKNMVPFQQHNEDLKISFSGFVPKPDSDRGLTSQSNSERSFIFINSRPVY
QKEILKLVQQYYSILHKDFYRLFPIFFLNITVPPSAVDVNLIPDKSQVLVHNKESICLAI
EENLILLYGPLNSSVSYEMNATNNTSKDINEAEQEVVTQSCTRINPLACTSQSSLSNDMQ
NANVQENRLVGNQTICNHYSHDTSTEIKIPDNEIVGYDQFQDNQPNNVLCQDQQNKEIFN
LDNNTAMDIQCENSMESDSRNYSFQEERERAKISADSSEITADKWSMGNAFKNSRAENLE
PVQILIPDKDEVRPQKKKGGLAKLQEESNNQAVKKTNVIKDKMGQITAYDLISNKTIRKS
MSAFELFVQDYSPDSLSEIAKLNSEKLLLKMEAMWNSLNEEEKKKYEEKADKDLERYNRQ
SRKAMCPNTLTSMREREKRHKIKLKDCLNNQQKLDTLFNSQIRKKHDDYQAKKTLQLPFS
MDAFKQKLQRLEYKKADKEESCLIRLLNFPDAWILASEEKIEMLNPYRMEEALLFKKLIE
NHKLLIEKLDTPIILTESLFSDTHYMEVLCSMPRESARFDGSSYLLDPRLVANGFKIRII
PGTSAVESQLEIEGMTSCLPYYGISDLKEILSAVINNNAQEVYECRPLKVVNYLEGEAVR
LSRQLPLYLSEEDVQNTINRMGKQFGTQHNSCVHGRPFTHFLTNIPQSN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaatgctgcagttgcaatcttgccacttaacatcctttctacagtggaaatg
ctggaaatcagaaatcccgttcctgaaagccaaaacatgaaacagctaccagcggaaact
gttcgacttctttctagttcgcaggtcattgtatcagttgtcaatgtggttaaagaactg
gtagagaattctttggacgctaatgcaaccagtattgatgttaagttggagaactatggt
tttgaaaagattgaagtacgagataatggtgatgggattaaggcagttgatgttcctgtg
atggcaatgaagcactacacatcaaaaataagctcttcggaggaccttgaaagcttgagc
acatacggttttcgtggcgaagctctgggctccatttgtagcatatcacaggtttctatt
acaacaaggacagctgctgatgattttagcacccagtacaattttgatataagcggtcat
ataatttctcagaagccatctcatcttggaacagggacaactgtaacagttcaaaagctg
ttcaagaatctgcctgtaagaaaacagttttattctactgataagaaatgtaaggaagaa
atgaaaaaaactcagaagctgttgatggcatatggcattataaaaccagaactgagaata
atgtttacacataacaagacaatcatatggcagaagaccagggtactagaccataaaatg
gctttcatggaagtagtgggacctgctgttatgaagaacatggtaccttttcaacagcac
aatgaagatctgaagatatctttcagtggctttgttccaaagcctgattcagacagaggt
ttgacaagtcagtcgaactcagaaagaagtttcatttttataaacagccgaccagtgtat
caaaaagaaattcttaagcttgttcaacagtactatagcatattacacaaggatttttat
cgattgttcccgattttctttctcaacattactgttcctccatctgctgtggatgtcaat
ttaataccagataaatctcaagtattagtacataataaggaatctatctgtcttgctatt
gaagagaatttgatattattatatggaccattaaatagctctgtgtcttatgaaatgaat
gcaaccaacaatacctcaaaagatattaatgaagctgaacaagaagttgtaacccagtct
tgtacaagaataaatccacttgcttgtacttcacaatcttcacttagtaatgacatgcaa
aatgctaatgtacaggaaaacagattagttggcaatcaaacaatatgtaatcattattct
catgatacttctactgaaattaaaatacctgataatgaaatagttggatatgatcaattt
caggataaccaaccaaataatgtactttgtcaagatcaacagaataaggaaatatttaat
ctagataataatactgcaatggacattcagtgtgaaaatagcatggagagtgattcaaga
aattacagttttcaagaagaaagagaaagagctaaaatctctgcagattcatctgaaatc
actgctgataaatggagtatggggaatgcatttaaaaattccagagcagaaaatctggaa
ccagttcaaattttaattccagataaggatgaagtaagacctcaaaagaaaaagggtggt
ttagcaaaacttcaagaagaaagtaacaatcaagctgttaaaaaaacaaatgtgataaaa
gataaaatgggtcagattacagcctatgacttaattagcaataagactatcaggaaatcc
atgtcagcatttgaactttttgttcaagactattctcctgattcattgagtgaaattgcc
aaattaaactcagaaaaactactgctgaaaatggaagcaatgtggaactcattgaatgaa
gaagaaaaaaagaaatatgaggaaaaagctgacaaagatctggaacgatacaacaggcaa
agcagaaaagctatgtgtcctaatacactaacatcaatgagggagagagagaaaagacac
aagattaaactaaaagactgcttaaataatcagcaaaaattggacaccctttttaactcg
caaataagaaaaaagcatgatgattaccaagcaaaaaaaactctacaactgcctttctcc
atggatgcattcaaacaaaaacttcaaaggcttgaatataaaaaggcagataaagaggaa
tcttgcttaattcgccttctgaattttcctgatgcgtggatacttgcctctgaagaaaaa
atagagatgctaaatccatacagaatggaagaagcccttctcttcaaaaaactaattgaa
aatcataaacttcttatagagaagttggacactcctattatattaactgagagtcttttt
agtgacactcattatatggaagtgctttgcagtatgcctagggaaagtgcaagatttgat
ggatcatcctatttgttggatcccagacttgtagcaaatggatttaagataaggataata
ccaggtacttcagctgtggaaagtcagctggaaatagaaggaatgaccagctgtctgcca
tattatggtatatcagatttgaaggaaattctaagtgctgtgataaataataatgcgcaa
gaagtctatgaatgcagacctcttaaagtggtaaactatttggagggagaagcagtccga
ttatcccgacaattacctttgtatttatcagaagaagatgtacagaataccataaacaga
atgggaaagcaatttggaactcaacataacagctgtgtccatggtcgtccatttactcat
ttcttaacaaatataccacagagtaactag
DBGET
integrated database retrieval system
