Crotalus tigris (Tiger rattlesnake): 120298386
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Entry
120298386 CDS
T08476
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120298386 (WDR7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120298386 (WDR7)
Membrane trafficking [BR:
ctig04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120298386 (WDR7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
ASA1
EIF3I
CFAP251_N
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_ACSF4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_WDR41
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
PAC11
Beta-prop_Vps41
NBCH_WD40
WDR72_alpha-sol
PEP5_VPS11_N
KNTC1_N
Tricorn_2nd
PD40
LRS4
DNAI3_WD
Beta-prop_DCAF4
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
120298386
NCBI-ProteinID:
XP_039178061
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MAGNSLVLPVVLWGRKAPTHCVSTILLMDDVSMIVTGCHDGQICLWDLSSDLEINPRALL
FGHTASITCLSKASSSSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
AGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISKDWISSMSIIRSHRTQEDTVVAV
SVAGILKVWIVTSEMSHMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYCRV
FDAGDYSLLCSVPSENGQTWTGGDFVSADKVIIWTEDGQSFIYKLPASCLPASKSFRSDV
GKVIENLSPPELYCVLDQGEQKADKQLLICPPVTRFFYGRRECFHKLLIQGDSSGRLTIW
SIPDSLDKPDMTEGLPLTTSTSLQEAFNKLHPAGIIDQLSFIPNSDEPLKVTASVYIPAH
GRLVCGREDGSIVIVPATQTAIVQLLQDEHMCRRGWPPHRTLRGHRNKVTCLLYPHQVSS
RYDQRYLVSGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSSRVQHCVCSVAS
DHSVGLLSLREKKCIMLASRHLFPIQNIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCV
MGITAVEILNACDEAVPTAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLAS
DSSDKGNLPKYSHNSLMVQALKTNLTDPDVHILFFDVEALIIQLLTEEASRPNTALISPE
NLQKASGSSDKGSPFLAGKRAAVLLQQVKETIKENIKERLFDEDDEDEEARQRREDGDPE
YRSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNNVLDELCSERLGMLRPHRSVSFGLLS
RGGHMSLMLPGYHEPVDTVPSSDTDTEFLTERHIRGTYGISRAVTTQHLLSIISLANTLM
SMTNATFIGEHMKKGPARPPRPGTPDLGRVKTSTPIASPTAQGLIKQVAPAVSASTEADH
SGSGPAPPLHSCFLVNEGWSQLAAMHCVMLPDLLGLDQFRPPLLEMLARRWQDRCLEVRE
AAQALLLAELRRIEQAGRKEAIDNWAPYLPQYMDSVISPGVTAETIQTVNVTPEQSGSEV
KIQEEEHDLVDDDISAGTLSGLPQIKKITLSYEERRKQATAIVLLGVIGAEFGAEIEPPK
LLTRPRSSSQIPEGFGSTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTAIDLI
GRGFTVWEPYMDVSAVLMGLLELCADAEKQLSNIKMGLPLSPAADSARSARHALSLIATA
RPPAFITTIAKEVHRHTALQANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLL
VEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGSRHGSVALYDIRTG
KCQTIHGHKGAITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCVK
TYQVPPVQPASPGSHNALKLVRLIWTSNRNLILMAHDGKEHRFVV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaacagtttggtcctgccagtcgtcctgtggggacgcaaagctcctactcac
tgtgtatcgactatactattaatggatgatgtttcaatgattgtcacaggatgtcatgat
ggtcagatatgtctatgggacctctcttcagatttagaaataaaccccagagctctgttg
tttggtcatacagcatcaatcacttgcttatccaaagccagttcttcaagtgaaaagcag
tatatagtgagtgcatctgaaagtggagaaatgtgcctttgggatgtgaatgatggaagg
tgcattgaatttacaaaattagcctgcacacatactggcatacagttctatcaattcaca
gctgggactcagcgtgaagggagattgttgtgtcatggccattatccagaaattcttgtt
gtggatgctaccagccttgaagttctttattccttggtgtcaaagatttctaaggactgg
atcagttctatgagcattattcgatctcacagaacacaagaggatactgttgtagcagta
tctgtggctggcattcttaaagtatggattgtaacttctgaaatgagtcacatgcaggat
acggagccaatctttgaagaggaatctaaaccaatttactgtcagaactgccagagcatt
tccttctgtgcatttacccaaagatcacttttggtagtttgttctaaatactgcagggtt
tttgatgccggagattattccttgttatgctcagttccaagtgaaaatggacagacttgg
acaggaggtgattttgtgtcagcagacaaagtgataatatggactgaagatggacaaagt
tttatatataaactgccagccagttgcctaccagctagcaaatcatttcgcagtgatgtt
ggaaaagttattgaaaacctcagtcctcctgaactctactgtgttctagaccaaggagag
cagaaagcagacaaacagttattaatctgccctcctgtcacccggttcttctatggccgt
agggagtgtttccataaactactaatccagggggactcttcagggaggctcaccatttgg
agtattccagattcacttgacaagccagatatgactgaaggattgccgcttactacttct
acttctctacaagaagcatttaacaaactccacccagctggtattatagatcagttgagt
ttcataccaaatagtgatgagcctttgaaggtgacagcaagtgtctacatcccagcacat
gggcgactggtttgtggtcgtgaagatggaagtattgtaattgttccagccactcagact
gctatagttcagcttttgcaagatgaacatatgtgcagaagaggttggccacctcataga
actctacggggacatcgaaacaaagtcacctgtttgctgtatcctcaccaggtctcctct
cgttacgatcagagatacttggtctcgggtggtgtagatttttctgtcattatatgggac
atcttttctggagaaatgaaacacatcttctgtgtgcatggtggagaaatcactcaactt
ttggttcctccagaaaattgcagttcaagagtgcagcattgcgtgtgttctgttgccagt
gaccactcagtgggacttctaagtttacgtgaaaagaagtgcatcatgttagcttcccgg
catctctttcctattcaaaacataaaatggagaccttcagatgactacctcgttgttggt
tgtacagatgggtctgtatatgtatggcaaatggatactggtgcacttgaccgatgtgta
atgggaataacagctgttgagatcctgaatgcttgtgatgaagctgtaccgactgcagtt
gattctctcagccatccagctgtcaacctaaagcaggccatgaccagacgtagccttgct
gcactaaaaaacgtggcccatcagaaacttcagacacttgctacgaatctgttggcatcc
gattcctctgataaaggaaacttgccaaaatattcgcacaactctctgatggttcaagcc
ctgaagactaacttaacagacccagatgtccatattctcttctttgatgtggaagctctg
attattcagttactaactgaggaagcctccaggcctaacacagcccttatttcccctgag
aatttacagaaagcatctggcagctctgacaaaggaagtcccttcctggctggcaaacga
gccgcagttttgcttcagcaggtcaaagaaacaatcaaagaaaacataaaagaacgtctt
tttgatgaagatgacgaggatgaggaagccagacaaagaagagaggacggtgaccctgaa
tatcggtctagcaaatcaaagccgttaactctcttagaatataacctaaccatggacaca
gccaagctgtttatgtcatgccttcacgcttggggcttgaacaatgttctagatgaactt
tgcagtgagcgtctggggatgttacggcctcaccgttctgtctcttttggcttgctttca
agaggcggccacatgtctttgatgctcccagggtatcatgagcctgtagacacggtaccc
tctagtgatacggacacagaatttctcacagagcgacacatcaggggtacgtacggcatt
tcacgtgcagtaacaactcagcacctcctctccatcatctccctggcaaacaccttgatg
agcatgaccaatgcaacttttattggagagcatatgaaaaaggggccagccaggccacct
agaccagggactcctgacctcggaagagtgaagacttctactccaattgctagtccaaca
gcacaaggactgattaaacaagttgctcctgctgtttctgctagtactgaagctgatcac
tctggttctggccctgctcctcctttacattcctgtttcttagtaaatgaaggatggagt
cagcttgctgctatgcattgtgttatgctccctgacctgttgggcctggatcaatttaga
ccgcctctccttgaaatgttggctcgtagatggcaagatcgatgcttggaggtaagagaa
gctgcacaagccttactgttagcagagctgaggagaattgaacaggcgggcaggaaggaa
gccatcgataactgggctccttatttacctcagtacatggacagtgttatatcacctgga
gtgactgcagaaactattcagaccgttaatgttactcctgaacaatcaggatctgaagtt
aaaattcaagaagaagaacatgatctggttgacgatgacatctcagcaggtactctgtct
ggacttccacaaattaaaaaaataactttgtcatatgaagagagacgaaaacaagctacc
gctattgttctactaggagtaattggagcagagtttggagcagaaatagaacccccaaag
ttgctaactagaccacgcagttctagtcaaattccagaaggtttcggctcaacaagtggc
ggatccaactattccttggcaaggcatacctgcaaagctttgacctatcttctactgcag
cctcccagtcccaagcttcctcctcacagtaccattcggagaactgccattgatctcata
ggaagagggtttacagtgtgggagccttatatggacgtgtctgctgtgctgatgggcctt
ttggaactctgtgcggatgccgaaaaacaactttcaaacatcaaaatggggctgcctctg
agtccagcagcggactccgcccgctctgcacgacatgctctctccctcattgccacggcc
agaccacccgctttcatcactactattgccaaggaggtacacagacacactgctcttcag
gctaatacacagtctcaacaaaatattcataccaccaccttggctcgagcaaagggagaa
attctgagggttattgaaatccttattgaaaaaatgccaacagatgttgtggatctcctt
gtagaggtaatggacatcatcatgtattgtcttgaaggctcattagtcaagaagaaagga
ctgcaagagtgctttccagccatctgcaggttctacatggtcagctattatgagcggagt
catcgaatagcagttggatctcgccatggatcagtggccctctatgacatccggactgga
aaatgtcagacaattcatggccacaaaggagcaataacagccgtggcttttgcacctgat
ggtcggtatcttgccacttactccaacactgatagtcacatttccttctggcagatgaac
acctctctgttgggaagcatcgggatgctgaattctgcaccacagctccgttgtgttaaa
acctaccaggttcctcctgtccaacctgcatctccaggttcacataatgccctcaaactg
gtcaggcttatctggacttcaaaccgcaatcttattcttatggcccatgatggcaaagaa
catcgatttgtggtgtaa
DBGET
integrated database retrieval system
