Crotalus tigris (Tiger rattlesnake): 120298522
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Entry
120298522 CDS
T08476
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120298522 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120298522 (SMARCD3)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120298522 (SMARCD3)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120298522 (SMARCD3)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120298522 (SMARCD3)
PBAF complex
120298522 (SMARCD3)
GBAF(ncBAF) complex
120298522 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
TFIIA
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
120298522
NCBI-ProteinID:
XP_039178257
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAAEEVSGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGVPMGPPGPPYVGSPSVRPGM
PPAVMEPTRKRAAPQPQPQPPQQTPPQAPQQQTPQPQQTPTQTQGAAQQNRSRSVKRRKM
ADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISN
TFNPAKSDAEDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHL
VEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQGRPWRGAHNCRFRESRKEWTILTP
LGLDSGLGTGQPWLRSPTTPGRSGVGGPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIK
TNKLQDSHDKEYINCDKYFQQIFDCSRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQ
KKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESIHQLKIQRDFMLSF
SRDPKGYIQDLLRSQSRDLKVMTDVVGNPEEERRADFYHQPWSQEAVSRYFYCKIQQRRQ
ELEQSLGVRNT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaggaagtcagcgggggcgcgcggaaggccaccaaaagcaaacttttcgag
tttctagtccacggggtgcgtcctgggatgccctccggcgctcgcatgccccaccagggg
gttcccatgggtcccccgggccccccttatgtcggaagcccctccgtgcgccccgggatg
ccaccggcggtgatggagcccacgcgcaagcgggcggccccccagccgcagccacagccg
ccacagcagacgccgccacaggcaccgcaacagcagacgccacagccacagcagacgccg
acgcagacgcagggagctgcccaacagaaccgatcccgcagtgtgaagaggaggaagatg
gcggacaaaatcctccctcaaaggatccgggagctggtgcccgagtctcaggcctacatg
gacctgctggcctttgagcggaagctggaccagaccatcatgcggaagcgggtggacatc
caggaggccctaaagaggcccatgaagcaaaagcggaagctgcgcctgtacatctccaac
accttcaacccggccaagtcggacgccgaggactcggacggcagcatcgcctcctgggag
ctgcgggtggagggcaagctgctggacgacctcagcaaacagaagcggaagttctcgtct
ttcttcaagagtttggtcattgaactggacaaggacctctatggaccggacaatcacctg
gtcgagtggcaccggacccccaccacccaggagacggacggcttccaggtgaagagaccg
ggagacgtcagcgtgcgctgcactctgctgctcatgctggactaccagggaaggccgtgg
agaggcgctcataactgccgcttcagagagtcccggaaggagtggaccatcctgacccct
ctcggtctggattcaggcctgggtacaggacagccgtggttgcgctcgccgacgacccct
ggcaggagtggggtgggagggcctccccagttcaagctcgacccccgcctggcccgcctg
ctgggcatccacacgcagacccgctcggccatcatccaggcgctgtggcagtacatcaag
accaacaagctgcaggattcccacgacaaggagtacatcaactgcgacaaatacttccag
cagatcttcgactgctcccggctgaagttctccgagatcccgcagaggctgacaaatctg
ctgctcccgccggatcccatcgtgatcaaccacatcatcagcgtggaccccaatgaccag
aagaagacggcctgctacgacatcgacgtggaggtcgaggaccccctgaaagggcagatg
agcagcttcctgctctccacggccaatcagcaggagatcaccgccctggacaacaagatc
cacgagaccatcgagtcgatccaccagctgaagatccagagggacttcatgctgagcttc
tccagagaccccaagggctacatccaggacctcctccgctcccagagcagggaccttaag
gtcatgacggacgtggtggggaacccggaggaggagcggagggcagacttctatcaccag
ccctggtcccaggaggccgtcagcagatacttctactgcaagatccagcagcgtcggcaa
gagttggaacagtctctgggggtccgcaacacataa
DBGET
integrated database retrieval system
