Crotalus tigris (Tiger rattlesnake): 120298809
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Entry
120298809 CDS
T08476
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120298809 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
120298809 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120298809 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120298809
NCBI-ProteinID:
XP_039178799
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MNNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLSDGGKAANANVGIGDVVLSIDGISAEG
MTHLEAQNRIKTCSGNLVMNLQRPPAAPKPDPIPVQQVEPKDLVKPVPIASSAVPKVSST
TSMAFNKAPRPFGAVSSSKVTSIPSPSSAFTPASASLPLHASPTPLATVTPPPFTASGAH
ANVKANADQRCPVLSAAKPIVNTPWQSPHNAPFNERAPEVTEGQRSGSRENQGDSKQQNG
NPDEVKNPPKRPPRKHVVYRNTDFFHPPVHSNNSKKRLIEDTEDWHPRTGTTQSRSFRIL
QQITGTERMKEPESDNLKKTKESQTENGDLRNIMNGLEAQHSHSEATQICEIPEEFQQSA
PPPPPLPQPQRAEANSTSSVTIEPALTTISSTTLSGPNLSPSFRRELFLNNPLEALPKCA
PHPPVTIHILSINSQVATVSKTTSAIARSRRLKTGCYELIAPVSKLGTNEADHKKNVPMM
NTVGTQTFEPLVLSLASVESTSTAQPEKSTLEPPFPGRKLILENPLGSYLTYPQMPFTSV
PVEATMHIRNSAAAAVSAAVSMRSRLPDHSSYRSLLDALLITPIIKPPLLESTRPSRKST
SVLEMQRKWSSDSLEPTQFATCTAAAVRNVPENPENGASRPISAASGTGFKPSGPQYAEK
TSGWESSKQSAGSGWISNNNATSGEKTTATLLQTNEGTLVQRAEHIPAGKRTPMCAHCNQ
VIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGELYCEVCYEKFFAPDCARCQRK
ILGEVINALKQTWHVSCFVCVACHKPIRNNIFHLEDGDPYCETDYYALFGSMCHGCEFPI
EAGDRFLEALGHTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaataactacagtgtttcactggtgggtccagctccttggggattcaggctccaaggt
gggaaggacttcaacatgcctctcactatctctcggttgagcgatggaggcaaagcagct
aatgcaaacgtcggaataggtgatgtggtccttagcattgatgggataagtgcggaaggt
atgactcatctggaagcacaaaacagaataaagacctgctcgggtaatctggttatgaat
ctgcaaagaccacctgcagctccaaaaccagatccaattcctgtgcagcaggtagagcct
aaggacctagttaagcctgtgcccattgcatcttcagctgtgcccaaagtttcatccaca
accagcatggccttcaataaggcccccaggccctttggagctgtgtcctcctccaaggtc
acttccatcccatcaccgtcatctgccttcacaccagccagtgccagtcttccattacat
gcttctcctacacctctggccactgtcacacctcccccattcactgcctcaggagcgcat
gctaatgtcaaagctaatgctgaccagcgttgccctgtgttgagtgctgcaaagcctatt
gttaataccccatggcaatctccacacaatgcaccgttcaacgaaagggctccagaggtg
acagaggggcagcgaagtggatcaagagagaaccagggtgacagtaaacagcaaaacggt
aaccctgatgaggtgaaaaacccacctaaacgtccaccacggaaacacgtcgtgtacaga
aatacagattttttccatccaccggttcatagcaacaacagcaagaagagactgattgaa
gatactgaggactggcacccaagaactggaactactcagtcacgttctttccggatcctt
caacagatcacaggcactgaacgtatgaaagaaccagaatcagacaatctaaagaagaca
aaggaaagtcaaacagagaatggagatctgagaaatataatgaatggactagaagctcag
cactcccattctgaagctactcagatctgcgaaatacctgaggaatttcaacaatcagca
ccaccaccaccaccactaccacagcctcaaagggcagaagcaaattcaactagttctgtg
accatagaaccagctcttactaccatttcttctaccacactatctggacctaatctctct
ccatctttcaggagagaactttttctcaacaatcctctggaagccttacccaagtgtgca
cctcatccacctgtgaccatccatattctgagtattaacagtcaagtagccactgtgtct
aaaacaacatcagctattgctaggtcaagaagactaaaaactgggtgttatgaattgatt
gccccagtttcaaaattggggacaaatgaagctgatcataaaaagaacgtacccatgatg
aatactgtgggaactcagacctttgaaccactagtactttctcttgcttctgtggaatct
acttcaacagcccagcctgagaaatctacattggagcctccatttcctggcaggaaattg
atattggaaaatccgttgggaagttatttaacatatcctcaaatgcccttcacttcagtt
ccagtggaggcaacaatgcatattaggaatagtgctgctgccgctgtgtctgctgctgtg
tcaatgcgttccagactcccagatcatagtagctatcgttctctcttggatgctcttctc
attactcctattattaagcccccacttctggaaagcacaaggccatcaaggaaatctaca
agtgttctggagatgcaaaggaagtggagcagcgattctttggaacccacacaatttgct
acttgtacagctgctgctgtaagaaacgtgcctgaaaacccagaaaatggcgccagtagg
cctatttcagctgcttctggcacaggattcaagccctcaggacctcaatatgctgagaaa
acctctggctgggaatcttctaagcaatcagcgggaagtggatggatttccaacaataat
gcaacatctggtgagaaaacaacagccacacttctgcaaactaatgaaggtactttggtt
cagagagcagagcatattccagcaggcaagcggactccaatgtgtgctcattgcaatcaa
gttatcagagggcccttccttgtagcattgggaaaatcctggcaccccgaagagttcaat
tgtgctcattgcaaaacttccatggcttatattggttttgtggaagagaagggagaactc
tactgcgaggtttgctatgagaagttctttgccccagattgtgcccgatgccagaggaag
atacttggagaagtaataaatgctttgaaacaaacctggcatgtctcctgctttgtgtgt
gtggcctgtcacaagccaattcgcaacaatattttccatttggaagatggtgacccttat
tgtgagacagattattatgcattatttggttccatgtgccatggatgtgaattccctatt
gaagctggggacaggtttctggaagccttgggccatacttggcatgatacctgttttgtg
tgctcagtatgctgtgaaagtttggagggccagactttcttctccaagaaggacaagcct
ctatgtaagaaacatgctcactcagtgaacatctga
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