Crotalus tigris (Tiger rattlesnake): 120298826 Help Entry 120298826         CDS       T08476                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism ctig  Crotalus tigris (Tiger rattlesnake) Brite KEGG Orthology (KO) [BR:ctig00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ctig03021]     120298826 (SETX) Enzymes [BR:ctig01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120298826 (SETX)     5.6.2.5  RNA 5'-3' helicase      120298826 (SETX) Transcription machinery [BR:ctig03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      120298826 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_16 AAA_22 ResIII SLFN-g3_helicase NPHP3_N NAT10_TcmA_helicase DUF4164 nSTAND3 UvrD_C_2 Motif Other DBs NCBI-GeneID:  120298826 NCBI-ProteinID:  XP_039178858 LinkDB All DBs Position Unknown AA seq 2535 aa AA seqDB search MSTCCWCTPGGLTTIKLLTSYASSALSPKDVAAANEDLCYCLECVEEYHKARDEVPSLHQ ILWDREVSRLVDRFEKSMQEDNENDLYLVEEDRITPLISCYTGPNFEKRLRVPLLEVLKY PYLLLHEHLSELCVDALCKMEEMNYSYQVVGKHPGIYLLMVHPNEMIRRWAILTARNLGK VDRDDYYDIQEVMICLFKVVELGLFENPDIYSSPGIEKTKLILLPPHLYDTSNYKNYWLG LCMLLSVLEEQAMDSMLLGPDKQNFMQSIMNTMKKQTDDEINDPFWPVLHCFMVILDKLG SKVWGQLVDPVQAFQAIINNASYKKEIENIRRNCSRTKSEPLLDYRDETVTCSQIVYNYN LERPHKDSRLKTTACLDYCPNFYEEMQTLTDMFQYDIGRDMRLHHSTFLWFIPFVHSLMD LKGLGVAYSMVVIQHLCSEVKEVLHHTVQPCDKVSQFFIWILVMVVELNLKKKCFNTLWV SSQNWVEVVVTCARLPSMAFACRAEKDFARNGPRSLTKVPSWEPDSIQSACMNLIRLLLK EGYQMGQKASPFLDELNLLRRSHEDWKLSPQQARELQTCLIEIIRSLWTKSSSPSSHGAS PTRLFSEQEGRSPGYLPQEHSTYQSPRRQDEVFQEGTLSEKKYSLEEEAKRSICGKQSHQ RSSEFHLANIKQELKESLLHEDHMLHSTGSPTDAQNSGSSHSRLMKQNSSLNQGSFDKVV QKKDTSGKEEKPRIIDVDLHQWPSSSALEEKQIPKKFTEKMKSNKADLTLKLKQFVQNRK RQLGPESEKQQSIKEEKQDQEEMTRRTSGDGSCMSNWALSLENGFQAKTLCIKKEPRDSL AEFKSAWKSGAESEESSTDDELNVPLLEIRKELIRKKSMVQAMEPEIDKKGKLCLVAGRE STLSYQNPIQRKVQGALRSLSESESHTLSSEAGRPSNQVIIISDLSSDEEENKVNLSQRS QEENLSVSLQKDPEANEQDAITVSSSPLMYGECESQCFEFETEEEIYSAWQDSQLDKTTE ADVFPVKTADRSASSDLELARHLDEQDYDTDHLGHDIIEKNEQELEQQVKIDKTKLKLPV QADEKNVGEGSTAVGSKYFTAMHADGRETPKQSSASTSSTPLLPPPSGRPLTPSLEPTPR PRKSLAKSKWLNTAQRSPEKRRLVTEKSPCATPSGSPHPFVVPPKKVHHFPEPTSTVEKL GLKKRARRAAELSQRSHDVVAQLRSYGKAAGQLPQKRRRAKLIEPQRMVIRNKVLLASQE RQFFRQSRPKKKEKGDNVPRAKRTFLKPTVASTSKEEVENLKGKPSQFSHSSNHVKELLP QHSQGDDGSHSAPLEREALPSSRQDPLKPDSDVPGCSTAVPGSVCSSSEVGSSSSDSSSD QRSKNLSENASGLKEDLNPEENEDDLFLTQRDPVDMELCSQMDSSSHPEDTVVLPTLQDP PQVIENCRHPGCPKKMEGAGPFCHGHSLPNPPDHVFAKPCAPPKPSTKKIFSSSAASQIA SLSKDLETSSTHVAAAKTSKADGLRTKLTLANLLCPSNMNNVSTQPQNSHVVGNASKMPV PRSDTGQEARPFFARVNSSHNQPRDHSIFTKEILKWSYDMFANFRELGPPSHLLQALVIS VPVKFPNYDDYFKIFFPLMMLNAFEEVAFDWMENRKLKEPKSFHLTLLNFNMDLNKADFT ANISQHDVENKYHPKDDDLVLLTVSDKRFYDEREGENRAIQHVGFVTRFSNPCIHNAKTK EQQVTCHLSIQTQGNLSRIEKEVKCIVVSSLATTHRRFQALLMLNRSPLAMPILSPSAPY FSPRDLNAESEKSLPYMRDFNQGQRRAIESAYAMITQHPSSPKICLIHGPPGTGKSKVIV GLLHRILDERSGKENAVQRLNAKIKTNRILVCAPSNAAIDNLMKKIILEFKKYREKNALG NCGDINLVRLGQQKSINSEVRKFSLDDQVDRKINKAMLGKHQDLQKRKEDLDRQLDTLSR LRAMDRSENGEKKQQLEDEICQLSKERQCLASQLKEARGRSQELKASIILESHIICCTLS TSGGMLLKSAFRRLGGDPVSCVIVDEAGQTCEIETLIPLIHGCKKLVLVGDPEQLPPTIK SLKAQDHSYDQSLIDRLCKHLKEQDQENISGKFPVFQLTVQYRMHPEICLFPSKYIYEGV LTTDRKIAEDRFSLAWPFQPYLLFDVLDSREECENDSFYNPQELTLLTELMKVIKEKKKD IGSRQIGIITPYNAQKRRIQRQLDKEFGENNVGEIDTVDGFQGREKDCVIVTCVRANSTQ GSIGFLRSLKRLNVIITRAKYSLFILGKLKTLMENKDWNEMIQDAQRRGNIIQTSKNTYR TSALKILKSRPFPCSRVATPERDAQEPSAFSGTKQQALPGPDTQRPPVPLPTPAVNRTPQ ETQKPRPLLVRQPKPIQDRPQDPRLFRRAKSASKAANGKEGETSALWASSRQKNPGPLPA QSRSNSADTLGETSSRVGAPLPSRAPSTEIPDQRLSFLTEQFKTSENVPGYPQRILEASQ EKDDSTQPKKRRITF NT seq 7608 nt NT seq  +upstreamnt  +downstreamnt atgagtacatgttgctggtgtacaccaggtggtctcaccaccatcaagctactaacaagt tacgcctcgtctgccctgtctccgaaggatgttgccgcagccaacgaggacctctgttac tgtctggaatgcgtggaggagtaccacaaggcaagagatgaagtcccgtctttgcaccag atcctgtgggatcgggaagtttcccgtcttgtcgaccgctttgagaaatccatgcaagaa gacaatgaaaatgacctgtacttggtggaggaggacaggatcacccccttgatctcctgt tacacggggcctaattttgagaaacgtctccgggtgcccttgctggaagtcctcaagtac ccctacctgctacttcatgaacacctcagcgagctgtgcgtagatgctctttgcaaaatg gaggaaatgaactactcctaccaagtggttggcaaacatcccggtatctatttactcatg gtgcatcccaatgagatgatccgccggtgggccatcctgactgctagaaacctgggcaaa gtcgaccgggacgattattacgacatccaagaagtgatgatctgtttgttcaaagtcgtg gaactgggcctctttgaaaacccggatatttatagctccccagggattgagaaaaccaag ctgatcctgttgcctccccatctgtacgacaccagcaattacaaaaactattggcttggt ctctgtatgctgctctcggtgctagaagaacaagcaatggattcaatgctgctcggacca gacaagcagaatttcatgcagtccatcatgaacaccatgaaaaagcagacagatgatgaa atcaatgaccccttttggcccgtcctccactgtttcatggtgatcctggataagttgggg tccaaagtgtggggtcagttggtggatccggtccaggcgtttcaggcgatcatcaacaac gcaagctataagaaggaaatagagaacattcgccgaaattgctccaggacaaaatcagag ccattattggactacagggatgaaacagttacctgcagccagattgtatataactacaac cttgaaagaccccacaaggactcaagattgaagactactgcttgcttggactactgcccc aacttttatgaagaaatgcagaccctgactgacatgttccagtacgacatcgggcgggac atgcgtttgcaccacagcactttcctctggttcattccttttgtccattccctgatggac ctcaaggggctgggcgtcgcctacagcatggtggtcatccaacacctctgttcagaagtc aaggaggtccttcaccacaccgtccaaccttgtgacaaagtgtctcaatttttcatctgg atcctcgtgatggtagtggagctcaacttgaagaagaaatgcttcaacactttgtgggtc agctctcaaaactgggtggaggtggtggtgacgtgtgccaggcttccaagtatggcgttt gcctgcagagctgagaaggactttgccagaaacggacctagaagtctaacaaaagtacca tcttgggaaccggattctatacagtctgcttgcatgaatttgatccgacttctcctcaag gagggctaccagatggggcagaaggcctccccattcctcgacgagctgaatttgcttcgg cgtagtcacgaagactggaagctgagcccccaacaggcgcgggaattacagacgtgcttg attgagatcataagaagcctctggactaagtcatcaagtccttcctcccatggagcgagt cctacccgtctctttagcgaacaggaggggagaagtccaggatatcttccccaagaacac tcaacctatcagtcaccaagaaggcaggacgaagtttttcaagaaggaactttgtctgag aaaaaatatagcttggaggaggaagcaaagagaagcatttgtggaaagcaaagccatcag agaagttccgagttccatttggccaacattaaacaggaacttaaagagagtttattacat gaggaccacatgttgcactcaacagggagtcccacagatgcccagaacagcggaagctcc cattcaagactgatgaagcagaatagctccctaaaccaaggcagtttcgacaaagtcgtt cagaagaaagataccagtgggaaagaagagaagcccagaattatcgacgttgatcttcac caatggcccagcagttctgctttggaagaaaagcagattccaaaaaagttcaccgagaaa atgaagtcaaacaaagctgacctcactttgaaattaaaacagtttgtgcagaacaggaag agacagctgggaccggagagtgaaaagcagcagtccattaaggaggagaagcaggatcag gaagaaatgacaagaagaacgtcgggagatggtagctgtatgtccaactgggcgctaagt ttggagaatggctttcaagctaaaacactttgcataaagaaggagcccagagacagtttg gcagaatttaagagcgcttggaaaagtggggcagagtcagaagaaagtagcacagacgat gaactgaatgtccccttgctggagattaggaaggagctgataagaaaaaaatcgatggtc caagcaatggagcccgaaatagacaaaaaaggcaaattgtgtttagttgctggtcgagaa agtaccttgagttaccagaatcctattcaaagaaaagttcaaggggcattgaggtcttta tctgaaagtgaaagtcacacattgtcttctgaagcaggtagaccctcaaaccaggtcatc atcatttcagacttgtcttccgacgaagaagagaacaaagtgaatttgagccagaggagc caagaagaaaatctgagtgtgtcccttcagaaagaccccgaggctaacgaacaagatgct ataaccgtttccagttctccgttgatgtacggggaatgtgaatcgcagtgctttgagttt gaaactgaagaggagatttactccgcttggcaagatagccagttggacaagacaacggag gcagatgtttttccagtaaagacagctgacaggtccgcctcatctgacttggagttggct aggcaccttgatgagcaggattatgacacagatcatcttgggcatgacattattgaaaaa aacgagcaggaattggaacagcaggtgaaaattgataaaaccaaactgaaacttcctgtc caggccgatgaaaaaaatgttggtgagggaagcacagctgttggttcaaagtatttcaca gccatgcacgccgatggtcgggagactcccaaacagagttcagcttcaacttccagtaca ccactactaccaccaccatctggtagacctttgacaccatcactggaaccaactcccagg ccaaggaagagcttggctaaatccaagtggctgaacacagctcaacggagtcctgagaaa agaaggctcgtgactgaaaaatcgccctgtgcgacaccatctggatcgcctcatcctttc gtggtccctcccaaaaaagtccaccattttcccgagccaacgtccaccgtggaaaagctg ggcctgaaaaagagagcccgcagagctgcagagctctcccaacgttctcacgacgtcgtc gcccagttgcgcagctatggaaaagcagctgggcagcttccccaaaaaaggagaagggcc aaactgattgaacctcagcggatggttatccggaacaaagtgctgttggccagccaggaa cgccagttcttcagacagtcaagacccaagaagaaggagaaaggagacaatgttcccaga gcaaaaaggacttttctcaagccaactgtggcgtctactagcaaggaggaggttgaaaat ctaaaaggaaagcctagccagttcagccattcttctaaccatgtgaaggaattgctacca cagcattcacaaggggatgatgggtcccattctgcacctctggagagagaggctcttcct tcgtcaaggcaagaccctctcaagcctgactcagatgttccaggatgttccaccgctgtt ccagggagcgtctgctcttcaagcgaagttggcagcagcagctcagattcctcttccgat cagcgtagcaagaacttgagtgagaacgcatctgggctaaaggaggacctcaacccagaa gagaatgaggatgacttattcctaacccagagagatccggtggacatggagctttgctca caaatggacagtagcagtcacccagaagacacagtggtcctcccaactttgcaggatcca cctcaggtcattgagaactgcaggcatcccggatgtcctaaaaagatggaaggagcaggt cccttctgccatggtcattctctgcctaaccctccagaccacgtctttgccaagccctgc gcgcctcccaagccttccaccaagaaaatcttcagctccagtgctgcttctcagattgcc agcctctccaaagatctagagaccagctccacgcatgtagcagcagcaaagacctccaag gcagatggcctgaggaccaagctgactttggccaatctcctttgccctagcaatatgaat aatgtctccacgcagccccaaaacagccatgttgtcggtaatgccagcaagatgcctgtt ccacgctctgacacgggccaggaggcacgcccattttttgcccgagtcaacagttctcac aatcagcctagagaccacagcattttcaccaaagaaatcctgaagtggagctacgatatg tttgccaacttcagggagctgggaccaccaagccatctcttgcaggcgctcgttatctct gttccggtcaagtttccgaactacgatgactattttaagattttcttccctttgatgatg ctcaacgcctttgaagaggtagcatttgactggatggagaatcggaagctgaaagagccc aagtcttttcatttgactttactgaatttcaacatggatttgaacaaagccgatttcaca gctaatatttcccagcatgatgtagaaaataaatatcatcccaaggacgatgacctggtc ttgctgacggtatctgacaaacggttttacgatgaacgagagggggaaaaccgggccatt cagcatgtgggattcgtgactcgtttttctaatccttgcattcataatgctaaaacgaag gaacaacaggtcacttgtcacctctccatccagactcaaggaaatctctcgcgcattgag aaagaggtgaaatgcatagtggtcagctccttggcgacaacccaccggaggttccaggcc ctcttgatgctgaatcgcagcccattagccatgcccatcctgtctccaagtgccccctac ttctccccgagagatttaaacgccgagtctgagaaatcgcttccttacatgagggacttc aaccaagggcagaggcgagctattgaaagtgcttacgctatgataacccagcatccatct tcacccaagatctgcttaatccatggaccacctgggaccgggaaatcgaaagtgatcgtt gggcttctgcaccgcatccttgatgagcgatcgggaaaggagaacgccgtccagaggctg aacgccaagatcaagacgaaccgcatcctggtttgtgcgccttccaacgccgccatcgat aacctcatgaaaaaaataattttggaattcaaaaaataccgggagaaaaacgctttaggg aattgtggcgacatcaacctggtccgtctagggcaacagaagtcgatcaacagcgaagtc cggaaattcagcttggacgatcaggtcgaccgcaaaatcaacaaagccatgcttggtaaa caccaagacctccaaaagaggaaggaagatttagatcggcagctggacacgctttctcgt ctgcgggccatggaccgaagcgagaacggggagaagaaacagcagctggaggatgaaatt tgccagctctccaaggagaggcagtgcttggcttctcaactcaaagaggctcgcgggcga tctcaagaattgaaagccagcatcattttggagtcccatatcatttgctgcaccttgagc accagcggagggatgctgctgaaatccgctttccgcaggctgggcggggaccccgtcagc tgtgtgattgtggacgaggcaggacagacgtgtgaaatcgaaactcttatccctctgatc catggctgtaagaagctggtcctggttggcgatcccgaacagctgcctcccaccattaag tccctgaaagcccaggatcatagctacgaccagtctctaatagaccgtctctgcaagcat ctgaaggaacaagatcaagaaaatatctctgggaaatttccagtgtttcagctcaccgtt cagtatcggatgcacccagaaatttgccttttcccctccaaatatatctacgaaggggtc ttgaccactgacaggaaaatagcagaagatcgcttctcgctggcctggccttttcaaccc tatttgcttttcgacgtcttagacagccgcgaggaatgcgagaatgactccttttataac ccccaagaattgacgctgttgacggagctaatgaaggtcattaaggagaaaaagaaggac atcggctctcgccaaattggaatcatcactccttacaacgcgcaaaagaggaggatacag agacagctggataaagaatttggagaaaacaatgttggggaaattgacaccgtggacgga ttccaaggccgggagaaagattgcgttattgtcacctgtgtgcgggcaaacagcacacaa ggatcgattgggtttttgagaagtttgaagcgcctgaacgtcatcatcacccgggccaaa tacagcctgtttattctcgggaagctgaagactctcatggagaacaaagactggaacgag atgatccaggatgcccagcggagagggaacatcatccagacctccaagaacacttacaga accagcgccctgaaaatcctcaaatccagaccgtttccctgttccagagtggcaactcca gaaagagacgcccaagaaccctcggcctttagtggaaccaagcaacaggcccttcccggc cccgatacgcagcgccctccggtccccctccccactccagccgtcaacaggacccctcaa gagacacagaagccccggccgctcctcgtgaggcagcctaagcccatccaggacaggccg caagacccccgtctcttcagacgagcaaaatcggcgagcaaggccgccaacggcaaggag ggtgaaacctcggctttgtgggcctcatcaaggcaaaaaaaccccggccctctgcccgct cagagccgtagcaattccgcggacacgctgggggagacgtcaagccgcgttggcgcccct ctgccgagcagagccccctccaccgaaatcccggaccagagactctcctttctgaccgag caattcaagacttcggaaaacgtccccggctatccccagaggatattggaggcgtcccag gagaaagacgattctacccagcccaagaagagacgcatcactttctga

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