KEGG   Crotalus tigris (Tiger rattlesnake): 120299119
Entry
120299119         CDS       T08476                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120299119 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120299119 (HBS1L)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120299119 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2 GIP1_N
Other DBs
NCBI-GeneID: 120299119
NCBI-ProteinID: XP_039179520
LinkDB
Position
Unknown
AA seq 685 aa
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSKRENTSVSGKPLEEYDY
EDSAHSNFISSHQLTGLEKGQLNSCLDRMKEVLGDSVPEKILVEAVLSSNFDIQQALDSI
LAQDNKQNVKTKNEDNVIVGRPTKGKVKDSQAIKTDSDIVPKVTKMTVSGRKQTTGFEVP
CANVEENGHNTFMPQKGFSAGDTIANMGIAEILPKPTFPSQTIQASEDSSVVPTPVKKSG
KSKQQLDIKAELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKIITLMDAPGHKDFIPNMITGA
AQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EIVNKLGQFLKQAGFKESDVAYIPTSGLGGENLVTKSQTSELAKWYTGKCLLEQIDSFKP
PQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGERLLVMPPNETCTVKGIALHEQ
PVDWAAAGDHVSLTLTGMDIIKINVGCIFCCPKEPIKTCTRFRARVLIFNIEIPITKGFP
VLLYFQTVSEPATIRKLLSVLHKSTGEVAKKKPKCLTKGQNALIELQTQRPIALELYKDF
KELGRFMLRYGGSTIAAGVVVEIKE
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcccggcacaggaatgtccgtggctacaactacgacgaagattttgaagatgatgac
ctttatgggcaatctgtagaagatgattactgcatctcaccatcaacagctgctcagttt
atttattcaaaacgagaaaatacttcagtctctggcaaacctttagaggagtatgattat
gaagattctgcacatagcaattttatctccagtcaccagttgactggacttgaaaaaggt
cagctaaattcatgccttgatcgtatgaaagaagtacttggagattcagtgccagaaaaa
atactggtggaagcagtactcagcagtaactttgatatacagcaggctttggactctatc
cttgcacaagacaataagcaaaatgtgaagaccaagaatgaggataatgtaattgtagga
aggccaactaaaggaaaagtgaaagattctcaagctatcaaaacagattctgacattgtg
ccaaaagttaccaaaatgaccgtgtctggaaggaagcaaactactggctttgaagtccca
tgtgcaaatgtagaagagaatggacataatacctttatgccacaaaaaggattctctgct
ggagataccattgcaaatatggggatagctgagatactacctaaaccaacttttccctct
cagaccattcaagcatcagaagactcatcagtggtaccaactcctgtgaaaaaatctgga
aaatccaaacaacagttagatataaaagctgagttggagaagagacaaggaggaaaacat
ttgcttaaccttgtagtaataggacatgttgatgcaggaaaaagtactttaatgggccat
ttgttgtatcttctgggtaatgtgaacaagcgaacaatgcacaaatatgagcaagaatca
aagaaagcgggaaaagcatcatttgcttatgcatgggttttagatgaaacaggggaagag
agagaaaggggagtgacaatggatgtaggtatgaccaaatttgagacaaaaacaaaaatt
attacactaatggatgctcctggccataaagacttcattccaaatatgatcacaggagct
gcccaggctgatgtggctgtattagtggtggatgccagcagaggggaatttgaagctggt
tttgagactggtggacagacaagagaacatggtcttttagttcgatcgttgggagtaaca
cagctagcagttgcagtcaataaaatggatcaggtcaattggcaacaggaacgatttcag
gaaattgttaataaactcggacaattccttaagcaagccggttttaaggaatcagatgta
gcttacatccctaccagtggacttggcggtgaaaatcttgtcacaaaaagtcaaacaagt
gaattggcaaagtggtacacaggaaaatgtctgctggaacaaattgattctttcaagcca
cctcaaagatcggttgataaaccattcagattatgtgtatcagatgtttttaaagatcaa
ggatcaggattctgcgtgacaggtaaaattgaagcaggatacgtccaagttggggaacga
ctccttgtcatgcctcctaatgaaacttgcactgtgaaaggaattgctctacatgagcag
ccagtggattgggctgcagctggagatcacgttagtctcactttgactggcatggatatc
atcaaaatcaatgttggttgtatattttgctgtcccaaggagccaattaaaacctgcaca
cgcttcagagctcgtgttcttatctttaatattgaaatacccatcaccaaaggatttcct
gtgctcttatattttcaaactgtaagtgagcctgctactattagaaaattattgagtgtg
cttcataagagtactggtgaagttgccaagaaaaaacctaagtgtctgacaaaagggcag
aatgctttaatagaactacagacccaaaggcctattgctttggagctttataaagacttt
aaagaacttggaagatttatgttgcgttatggaggatccactatagcagcaggagtagtt
gtggagattaaggagtga

DBGET integrated database retrieval system