Crotalus tigris (Tiger rattlesnake): 120299119
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Entry
120299119 CDS
T08476
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120299119 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120299119 (HBS1L)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120299119 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
120299119
NCBI-ProteinID:
XP_039179520
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSKRENTSVSGKPLEEYDY
EDSAHSNFISSHQLTGLEKGQLNSCLDRMKEVLGDSVPEKILVEAVLSSNFDIQQALDSI
LAQDNKQNVKTKNEDNVIVGRPTKGKVKDSQAIKTDSDIVPKVTKMTVSGRKQTTGFEVP
CANVEENGHNTFMPQKGFSAGDTIANMGIAEILPKPTFPSQTIQASEDSSVVPTPVKKSG
KSKQQLDIKAELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKIITLMDAPGHKDFIPNMITGA
AQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EIVNKLGQFLKQAGFKESDVAYIPTSGLGGENLVTKSQTSELAKWYTGKCLLEQIDSFKP
PQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGERLLVMPPNETCTVKGIALHEQ
PVDWAAAGDHVSLTLTGMDIIKINVGCIFCCPKEPIKTCTRFRARVLIFNIEIPITKGFP
VLLYFQTVSEPATIRKLLSVLHKSTGEVAKKKPKCLTKGQNALIELQTQRPIALELYKDF
KELGRFMLRYGGSTIAAGVVVEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaatgtccgtggctacaactacgacgaagattttgaagatgatgac
ctttatgggcaatctgtagaagatgattactgcatctcaccatcaacagctgctcagttt
atttattcaaaacgagaaaatacttcagtctctggcaaacctttagaggagtatgattat
gaagattctgcacatagcaattttatctccagtcaccagttgactggacttgaaaaaggt
cagctaaattcatgccttgatcgtatgaaagaagtacttggagattcagtgccagaaaaa
atactggtggaagcagtactcagcagtaactttgatatacagcaggctttggactctatc
cttgcacaagacaataagcaaaatgtgaagaccaagaatgaggataatgtaattgtagga
aggccaactaaaggaaaagtgaaagattctcaagctatcaaaacagattctgacattgtg
ccaaaagttaccaaaatgaccgtgtctggaaggaagcaaactactggctttgaagtccca
tgtgcaaatgtagaagagaatggacataatacctttatgccacaaaaaggattctctgct
ggagataccattgcaaatatggggatagctgagatactacctaaaccaacttttccctct
cagaccattcaagcatcagaagactcatcagtggtaccaactcctgtgaaaaaatctgga
aaatccaaacaacagttagatataaaagctgagttggagaagagacaaggaggaaaacat
ttgcttaaccttgtagtaataggacatgttgatgcaggaaaaagtactttaatgggccat
ttgttgtatcttctgggtaatgtgaacaagcgaacaatgcacaaatatgagcaagaatca
aagaaagcgggaaaagcatcatttgcttatgcatgggttttagatgaaacaggggaagag
agagaaaggggagtgacaatggatgtaggtatgaccaaatttgagacaaaaacaaaaatt
attacactaatggatgctcctggccataaagacttcattccaaatatgatcacaggagct
gcccaggctgatgtggctgtattagtggtggatgccagcagaggggaatttgaagctggt
tttgagactggtggacagacaagagaacatggtcttttagttcgatcgttgggagtaaca
cagctagcagttgcagtcaataaaatggatcaggtcaattggcaacaggaacgatttcag
gaaattgttaataaactcggacaattccttaagcaagccggttttaaggaatcagatgta
gcttacatccctaccagtggacttggcggtgaaaatcttgtcacaaaaagtcaaacaagt
gaattggcaaagtggtacacaggaaaatgtctgctggaacaaattgattctttcaagcca
cctcaaagatcggttgataaaccattcagattatgtgtatcagatgtttttaaagatcaa
ggatcaggattctgcgtgacaggtaaaattgaagcaggatacgtccaagttggggaacga
ctccttgtcatgcctcctaatgaaacttgcactgtgaaaggaattgctctacatgagcag
ccagtggattgggctgcagctggagatcacgttagtctcactttgactggcatggatatc
atcaaaatcaatgttggttgtatattttgctgtcccaaggagccaattaaaacctgcaca
cgcttcagagctcgtgttcttatctttaatattgaaatacccatcaccaaaggatttcct
gtgctcttatattttcaaactgtaagtgagcctgctactattagaaaattattgagtgtg
cttcataagagtactggtgaagttgccaagaaaaaacctaagtgtctgacaaaagggcag
aatgctttaatagaactacagacccaaaggcctattgctttggagctttataaagacttt
aaagaacttggaagatttatgttgcgttatggaggatccactatagcagcaggagtagtt
gtggagattaaggagtga
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