Crotalus tigris (Tiger rattlesnake): 120299131 Help Entry 120299131         CDS       T08476                                  Symbol HMGB1 Name (RefSeq) high mobility group protein B1   KO K10802   high mobility group protein B1 Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig03410   Base excision repair ctig04140   Autophagy - animal ctig04217   Necroptosis Brite KEGG Orthology (KO) [BR:ctig00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     120299131 (HMGB1)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     120299131 (HMGB1)   09143 Cell growth and death    04217 Necroptosis     120299131 (HMGB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ctig03036]     120299131 (HMGB1)    03400 DNA repair and recombination proteins [BR:ctig03400]     120299131 (HMGB1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ctig04147]     120299131 (HMGB1) Chromosome and associated proteins [BR:ctig03036]  Eukaryotic type   Nucleosome assembly factors    HMG (high mobility group) proteins     120299131 (HMGB1) DNA repair and recombination proteins [BR:ctig03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      120299131 (HMGB1)    MMR (mismatch excision repair)     Other MMR factors      120299131 (HMGB1) Exosome [BR:ctig04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    120299131 (HMGB1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HMG_box_2 HMG_box HMG_WDHD1 NOA36 DUF4667 HMG_box_5 Motif Other DBs NCBI-GeneID:  120299131 NCBI-ProteinID:  XP_039179537 LinkDB All DBs Position Unknown AA seq 215 aa AA seqDB search MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF EDMARADKVRYEREMKTYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL SIGDVAKKLGEMWNNTSSEDKQPFEKKAGKLKEKYEKDIAAYRAKGKPDAAKKVAPKPEK SKKKKEEEDDDDDDEEEEEEEEEEEEEEEEEEDDE NT seq 648 nt NT seq  +upstreamnt  +downstreamnt atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcatatgcctattttgtg caaacctgccgggaagagcacaagaagaaacacccagatgcttcagtgaatttctcagag ttctcaaagaaatgttcagaaagatggaagactatgtccgctaaagaaaaggggaaattt gaagatatggcacgagctgacaaggttcgttatgaaagagaaatgaaaacttatgtaccc ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttcg gcgtttttcttattttgttctgagtatcgtccaaaaatcaaaggagaacatcctggtctt tccattggggatgttgcaaagaaacttggagagatgtggaataatacctcttcagaggat aaacagccctttgaaaagaaggctggtaaactgaaggagaaatatgaaaaggatattgct gcataccgagctaagggaaagcctgatgcagccaaaaaggtagctcctaagcctgagaaa agcaagaaaaagaaagaggaggaagatgatgatgatgacgatgaagaggaggaggaggaa gaagaggaagaagaagaggaggaagaggaggaagaagatgatgaataa

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