Crotalus tigris (Tiger rattlesnake): 120299384
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Entry
120299384 CDS
T08476
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120299384 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120299384 (USP39)
Spliceosome [BR:
ctig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120299384 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120299384
NCBI-ProteinID:
XP_039180129
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MAARIKREPRSPQPWSGFPTGAPRGTAGWGRVKREPAEEVAVKQEPEEEEEGGDAEPPVK
YGRFDPEDRRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSH
AYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFAKQHITSLDKQAKL
SRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYRHIRRPPGDIMF
LLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALH
SALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLRNEEYQEKMVESTFMYL
TLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGIMEKEYKTYKENFLKRFQLTKLPPYLI
FCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTIYDLIANIVHDGKPTE
GAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDSQEESHQQGT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcatcaagcgggagcctcgcagcccgcagccgtggtcgggctttccgacg
ggcgcgcctcgcggaacggccggctgggggcgggtgaagcgggagcccgccgaggaggtc
gcggtcaagcaggagcctgaggaggaggaggagggcggcgacgcggagcccccagtaaag
tatggtcgatttgatccagaagatcgccggagcaggcattgtccatacctggacaccata
aacaagagcgtcctggattttgactttgagaagctgtgttcaatctcactctcacatatc
aatgtctatgcttgtttggtgtgtgggaaatatttccagggccgtggcttgaagtcccat
gcttacattcacagtgtccagttcagtcatcacgtgttcctcaaccttcacaccttgaag
ttttattgcctgccggacaactatgagatcattgactcttctcttgaggacatcacttat
gtactgaagccaaccttcgccaagcagcacatcaccagtttggacaagcaggctaaactc
tcacgcgcctatgatggcaccacatacctgccaggcatcgtgggattgaataatatcaaa
gccaacgactacgccaatgcagttctccaggcgttgtcaaatgtcccgcccctgcggaat
tacttcctggaggaagagaattacaggcacatcaggcgtcctccgggggacatcatgttc
ctgctcgttcagaggtttggagagctgatgaggaagctgtggaatccacggaacttcaaa
gctcatgtctccccccatgagatgctgcaggccgtggtcctgtgcagtaagaagaccttc
cagatcaccaagcaaggtgatggagttgactttctttcctggttcctgaatgccttgcac
tctgctctcggggggacaaagaagaagaaaaagaccattgtaaccgatgtcttccaaggc
tccatgcggatattcaccaagaaattgccacaccctgatctgcctgccgaagaaaaggaa
cagctgctccggaacgaagagtatcaagaaaaaatggtggagtccactttcatgtacttg
accctggatctccccactgctcccctctacaaggatgagaaggagcagctcataatccca
caagttccactcttcaacatactggccaagtttaatggaataatggaaaaggaatacaag
acatacaaagaaaacttcctgaagcgcttccagctcaccaaactgcccccttaccttatt
ttctgtatcaagaggttcaccaagaacaacttctttgtggaaaagaatcccaccattgtc
aactttcccatcacgaacgtagatctccgggaatacctctctgaggaagtgcaggcagtg
cacaagaacaccatctacgatctcatcgcaaacattgtgcatgatggcaaacctactgaa
ggagcctaccggattcatgtgttgcatcatggcacaggcaagtggtatgagctgcaggac
ttgcaggtgaccgatatccttccccagatgatcacgctgtctgaggcttacatccagatc
tggaaaaggagagatagccaagaagagagccaccaacaaggaacgtga
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