KEGG   Crotalus tigris (Tiger rattlesnake): 120299537
Entry
120299537         CDS       T08476                                 
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018  RNA degradation
ctig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120299537 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120299537 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120299537 (LSM7)
   03041 Spliceosome [BR:ctig03041]
    120299537 (LSM7)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120299537 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120299537 (LSM7)
Spliceosome [BR:ctig03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    120299537 (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 120299537
NCBI-ProteinID: XP_039180369
LinkDB
Position
Unknown
AA seq 200 aa
MAASLASPRGHRRQRQGSTGGSPRSRRASLPQRIRRRPEEPRAAARKPRPLAEVPLGHVI
AFPAPNWRRGERAVSTGPRAEVTPGGGVGRGVPGESKMADKEKKKKESILDLSKYIDKTI
RVKFQGGREASGVLKGFDPLLNLVLDGTVEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVL
ICPQDGMEAIPNPFIQQQDG
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccgcctccctcgcgtctccccgcgggcaccggaggcagcggcaaggctccaccggg
ggaagcccccgctcaagacgagcctcgctgccgcagcggatccggaggcgacccgaggag
cctcgcgcggcagcccggaagcctcgtccgctcgcggaggtacctctcggccacgtgatc
gcgttccccgcccctaattggagaaggggcgaaagggcggtctcgacaggcccgcgggcg
gaagtgacgccaggagggggggttgggcgcggagtgcccggcgagagcaagatggcggac
aaggagaagaagaagaaggagagcatcttggacctctccaagtacatcgacaagaccatc
cgagtgaagttccagggcggccgggaagccagcggcgtcctgaaaggcttcgacccgctg
ctcaacctggtgttggacggcaccgtcgagtacatgagagatccagatgaccagtacaaa
ctcaccgaagacacccgtcagctgggactggtggtctgcagagggacctccgtggtcctc
atctgcccgcaggacgggatggaagccatccccaaccccttcattcaacagcaagacggc
tga

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